RNA–Protein interactions for RNA: ENST00000566196.5

PMM2-210, Transcript of phosphomannomutase 2, humanhuman

TSL 4

Gene PMM2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-210ENST00000566196 NISCHQ9Y2I1 1504 aa25.49■■□□□ 1.67
PMM2-210ENST00000566196 ABCC9O60706 1549 aa22.92■■□□□ 1.26
PMM2-210ENST00000566196 CCDC180Q9P1Z9 1646 aa22.89■■□□□ 1.25
PMM2-210ENST00000566196 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
PMM2-210ENST00000566196 NACADO15069 1562 aa21.65■■□□□ 1.06
PMM2-210ENST00000566196 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
PMM2-210ENST00000566196 DCAF8L2P0C7V8 631 aa21.46■■□□□ 1.03
PMM2-210ENST00000566196 MYO15BQ96JP2 1530 aa21.38■■□□□ 1.01
PMM2-210ENST00000566196 PABPN1Q86U42 306 aaKnown RBP eCLIP21.33■■□□□ 1.01
PMM2-210ENST00000566196 UNC13AQ9UPW8 1703 aa21.3■■□□□ 1
PMM2-210ENST00000566196 BICRAQ9NZM4 1560 aa21.2■□□□□ 0.98
PMM2-210ENST00000566196 ZCCHC6Q5VYS8 1495 aaKnown RBP21.12■□□□□ 0.97
PMM2-210ENST00000566196 DCAF1Q9Y4B6 1507 aa21.08■□□□□ 0.96
PMM2-210ENST00000566196 SHROOM4Q9ULL8 1493 aa20.92■□□□□ 0.94
PMM2-210ENST00000566196 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
PMM2-210ENST00000566196 CC2D2AQ9P2K1 1620 aa20.71■□□□□ 0.91
PMM2-210ENST00000566196 CECR2Q9BXF3 1484 aa20.67■□□□□ 0.9
PMM2-210ENST00000566196 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
PMM2-210ENST00000566196 NCAPD3P42695 1498 aa20.02■□□□□ 0.8
PMM2-210ENST00000566196 ATAD2BQ9ULI0 1458 aa19.93■□□□□ 0.78
PMM2-210ENST00000566196 SMARCA4P51532 1647 aa19.88■□□□□ 0.77
PMM2-210ENST00000566196 DNAJC5Q9H3Z4 198 aa19.87■□□□□ 0.77
PMM2-210ENST00000566196 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
PMM2-210ENST00000566196 HMGXB3Q12766 1538 aa19.85■□□□□ 0.77
PMM2-210ENST00000566196 CUX2O14529 1486 aa19.79■□□□□ 0.76
PMM2-210ENST00000566196 ERCC6Q03468 1493 aa19.78■□□□□ 0.76
PMM2-210ENST00000566196 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
PMM2-210ENST00000566196 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
PMM2-210ENST00000566196 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
PMM2-210ENST00000566196 NESP48681 1621 aa19.69■□□□□ 0.74
PMM2-210ENST00000566196 MROH2BQ7Z745 1585 aa19.64■□□□□ 0.73
PMM2-210ENST00000566196 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
PMM2-210ENST00000566196 THOC2Q8NI27 1593 aaKnown RBP19.5■□□□□ 0.71
PMM2-210ENST00000566196 PDS5BQ9NTI5 1447 aa19.43■□□□□ 0.7
PMM2-210ENST00000566196 KIF21AQ7Z4S6 1674 aa19.41■□□□□ 0.7
PMM2-210ENST00000566196 CADPSQ9ULU8 1353 aa19.39■□□□□ 0.69
PMM2-210ENST00000566196 WIZO95785 1651 aa19.37■□□□□ 0.69
PMM2-210ENST00000566196 MRC2Q9UBG0 1479 aa19.27■□□□□ 0.67
PMM2-210ENST00000566196 WDR62O43379 1518 aa19.23■□□□□ 0.67
PMM2-210ENST00000566196 RSF1Q96T23 1441 aaPredicted RBP19.22■□□□□ 0.67
PMM2-210ENST00000566196 CEP164Q9UPV0 1460 aa19.17■□□□□ 0.66
PMM2-210ENST00000566196 CFTRP13569 1480 aa19.16■□□□□ 0.66
PMM2-210ENST00000566196 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
PMM2-210ENST00000566196 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
PMM2-210ENST00000566196 URB2Q14146 1524 aaKnown RBP19.01■□□□□ 0.63
PMM2-210ENST00000566196 CCDC88BA6NC98 1476 aa18.93■□□□□ 0.62
PMM2-210ENST00000566196 PRDM2Q13029 1718 aa18.92■□□□□ 0.62
PMM2-210ENST00000566196 TRIM41Q8WV44 630 aa18.91■□□□□ 0.62
PMM2-210ENST00000566196 OSCARQ8IYS5 282 aa18.88■□□□□ 0.61
PMM2-210ENST00000566196 IFT140Q96RY7 1462 aa18.8■□□□□ 0.6
PMM2-210ENST00000566196 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
PMM2-210ENST00000566196 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
PMM2-210ENST00000566196 ABCC8Q09428 1581 aa18.75■□□□□ 0.59
PMM2-210ENST00000566196 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
PMM2-210ENST00000566196 EIF4G3O43432 1585 aaKnown RBP18.66■□□□□ 0.58
PMM2-210ENST00000566196 TARBP1Q13395 1621 aaKnown RBP18.63■□□□□ 0.57
PMM2-210ENST00000566196 RIMBP3CA6NJZ7 1639 aa18.63■□□□□ 0.57
PMM2-210ENST00000566196 RIMBP3BA6NNM3 1639 aa18.63■□□□□ 0.57
PMM2-210ENST00000566196 RIMBP3Q9UFD9 1639 aa18.63■□□□□ 0.57
PMM2-210ENST00000566196 POLA1P09884 1462 aaPredicted RBP18.6■□□□□ 0.57
PMM2-210ENST00000566196 AQRO60306 1485 aaKnown RBP eCLIP18.59■□□□□ 0.578e-9■■■□□ 16.9
PMM2-210ENST00000566196 ARHGEF11O15085 1522 aa18.58■□□□□ 0.56
PMM2-210ENST00000566196 AEBP2Q6ZN18 517 aaPredicted RBP18.53■□□□□ 0.56
PMM2-210ENST00000566196 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.56
PMM2-210ENST00000566196 CHD1O14646 1710 aa18.52■□□□□ 0.55
PMM2-210ENST00000566196 SOGA1O94964 1423 aa18.5■□□□□ 0.55
PMM2-210ENST00000566196 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
PMM2-210ENST00000566196 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
PMM2-210ENST00000566196 CUX1P39880 1505 aa18.45■□□□□ 0.54
PMM2-210ENST00000566196 FBLN2P98095 1184 aa18.45■□□□□ 0.54
PMM2-210ENST00000566196 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
PMM2-210ENST00000566196 CYB5RLQ6IPT4 315 aa18.43■□□□□ 0.54
PMM2-210ENST00000566196 ARAP1Q96P48 1450 aa18.4■□□□□ 0.54
PMM2-210ENST00000566196 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.54
PMM2-210ENST00000566196 MAGI1Q96QZ7 1491 aaPredicted RBP18.37■□□□□ 0.53
PMM2-210ENST00000566196 GRIN2BQ13224 1484 aa18.35■□□□□ 0.53
PMM2-210ENST00000566196 CLASP1Q7Z460 1538 aa18.34■□□□□ 0.53
PMM2-210ENST00000566196 CHMP7Q8WUX9 453 aaPredicted RBP18.33■□□□□ 0.52
PMM2-210ENST00000566196 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
PMM2-210ENST00000566196 SYNJ1O43426 1573 aa18.3■□□□□ 0.52
PMM2-210ENST00000566196 GAPVD1Q14C86 1478 aa18.27■□□□□ 0.52
PMM2-210ENST00000566196 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
PMM2-210ENST00000566196 ABCA10Q8WWZ4 1543 aa18.27■□□□□ 0.51
PMM2-210ENST00000566196 PBRM1Q86U86 1689 aa18.25■□□□□ 0.51
PMM2-210ENST00000566196 ABCA5Q8WWZ7 1642 aa18.23■□□□□ 0.51
PMM2-210ENST00000566196 TRHP20396 242 aaPredicted RBP18.21■□□□□ 0.51
PMM2-210ENST00000566196 WRNQ14191 1432 aaPredicted RBP eCLIP18.17■□□□□ 0.5
PMM2-210ENST00000566196 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
PMM2-210ENST00000566196 BIVM-ERCC5R4GMW8 1640 aa18.13■□□□□ 0.49
PMM2-210ENST00000566196 GRIN2AQ12879 1464 aa18.12■□□□□ 0.49
PMM2-210ENST00000566196 ADAMTS12P58397 1594 aa18.09■□□□□ 0.49
PMM2-210ENST00000566196 NUP160Q12769 1436 aa18.08■□□□□ 0.49
PMM2-210ENST00000566196 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
PMM2-210ENST00000566196 CEP170Q5SW79 1584 aa18.05■□□□□ 0.48
PMM2-210ENST00000566196 ERCC6L2Q5T890 1561 aa18.04■□□□□ 0.48
PMM2-210ENST00000566196 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
PMM2-210ENST00000566196 SHROOM2Q13796 1616 aa18■□□□□ 0.47
PMM2-210ENST00000566196 PRG4Q92954 1404 aaPredicted RBP17.89■□□□□ 0.45
PMM2-210ENST00000566196 JPH4Q96JJ6 628 aa17.88■□□□□ 0.45
PMM2-210ENST00000566196 RUSC2Q8N2Y8 1516 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms