RNA–Protein interactions for RNA: ENST00000566181.2

STUB1-207, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 3

Gene STUB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-207ENST00000566181 NISCHQ9Y2I1 1504 aa47.54■■■■■ 5.2
STUB1-207ENST00000566181 CCDC180Q9P1Z9 1646 aa42.44■■■■■ 4.38
STUB1-207ENST00000566181 ABCC9O60706 1549 aa42.05■■■■■ 4.32
STUB1-207ENST00000566181 RB1CC1Q8TDY2 1594 aa40.22■■■■■ 4.03
STUB1-207ENST00000566181 NACADO15069 1562 aa40.06■■■■■ 4
STUB1-207ENST00000566181 DCAF8L2P0C7V8 631 aa40.01■■■■■ 4
STUB1-207ENST00000566181 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
STUB1-207ENST00000566181 ZCCHC6Q5VYS8 1495 aaKnown RBP39.46■■■■□ 3.91
STUB1-207ENST00000566181 DCAF1Q9Y4B6 1507 aa39.3■■■■□ 3.88
STUB1-207ENST00000566181 UNC13AQ9UPW8 1703 aa39.29■■■■□ 3.88
STUB1-207ENST00000566181 PABPN1Q86U42 306 aaKnown RBP eCLIP39.26■■■■□ 3.88
STUB1-207ENST00000566181 DNAJC5BQ9UF47 199 aa39.12■■■■□ 3.85
STUB1-207ENST00000566181 BICRAQ9NZM4 1560 aa39.02■■■■□ 3.84
STUB1-207ENST00000566181 SCRIBQ14160 1630 aa38.7■■■■□ 3.79
STUB1-207ENST00000566181 SHROOM4Q9ULL8 1493 aa38.54■■■■□ 3.76
STUB1-207ENST00000566181 EIF4G1Q04637 1599 aaKnown RBP38.02■■■■□ 3.68
STUB1-207ENST00000566181 CC2D2AQ9P2K1 1620 aa38.01■■■■□ 3.67
STUB1-207ENST00000566181 CECR2Q9BXF3 1484 aa37.84■■■■□ 3.65
STUB1-207ENST00000566181 NCAPD3P42695 1498 aa36.99■■■■□ 3.51
STUB1-207ENST00000566181 SMARCA4P51532 1647 aa36.97■■■■□ 3.51
STUB1-207ENST00000566181 ATAD2BQ9ULI0 1458 aa36.92■■■■□ 3.5
STUB1-207ENST00000566181 BAZ1AQ9NRL2 1556 aaPredicted RBP36.87■■■■□ 3.49
STUB1-207ENST00000566181 SMARCA2P51531 1590 aa36.84■■■■□ 3.49
STUB1-207ENST00000566181 HMGXB3Q12766 1538 aa36.71■■■■□ 3.47
STUB1-207ENST00000566181 MROH2BQ7Z745 1585 aa36.62■■■■□ 3.45
STUB1-207ENST00000566181 PEG3Q9GZU2 1588 aa36.62■■■■□ 3.45
STUB1-207ENST00000566181 BAZ1BQ9UIG0 1483 aaKnown RBP36.58■■■■□ 3.45
STUB1-207ENST00000566181 ERCC6Q03468 1493 aa36.28■■■■□ 3.4
STUB1-207ENST00000566181 NESP48681 1621 aa36.24■■■■□ 3.39
STUB1-207ENST00000566181 WIZO95785 1651 aa36.2■■■■□ 3.39
STUB1-207ENST00000566181 CUX2O14529 1486 aa36.07■■■■□ 3.37
STUB1-207ENST00000566181 LAMC3Q9Y6N6 1575 aa36.06■■■■□ 3.36
STUB1-207ENST00000566181 RSF1Q96T23 1441 aaPredicted RBP36.04■■■■□ 3.36
STUB1-207ENST00000566181 CADPSQ9ULU8 1353 aa35.89■■■■□ 3.34
STUB1-207ENST00000566181 PDS5BQ9NTI5 1447 aa35.88■■■■□ 3.33
STUB1-207ENST00000566181 KIF21AQ7Z4S6 1674 aa35.78■■■■□ 3.32
STUB1-207ENST00000566181 TOP2AP11388 1531 aaKnown RBP35.77■■■■□ 3.32
STUB1-207ENST00000566181 THOC2Q8NI27 1593 aaKnown RBP35.76■■■■□ 3.31
STUB1-207ENST00000566181 DNAJC5Q9H3Z4 198 aa35.63■■■■□ 3.29
STUB1-207ENST00000566181 CFTRP13569 1480 aa35.56■■■■□ 3.28
STUB1-207ENST00000566181 MRC2Q9UBG0 1479 aa35.5■■■■□ 3.27
STUB1-207ENST00000566181 FANCD2Q9BXW9 1451 aa35.46■■■■□ 3.27
STUB1-207ENST00000566181 CEP164Q9UPV0 1460 aa35.45■■■■□ 3.27
STUB1-207ENST00000566181 CCDC88BA6NC98 1476 aa35.4■■■■□ 3.26
STUB1-207ENST00000566181 WDR62O43379 1518 aa35.39■■■■□ 3.26
STUB1-207ENST00000566181 PRDM2Q13029 1718 aa35.2■■■■□ 3.23
STUB1-207ENST00000566181 URB2Q14146 1524 aaKnown RBP35.13■■■■□ 3.21
STUB1-207ENST00000566181 TOPBP1Q92547 1522 aa34.83■■■■□ 3.17
STUB1-207ENST00000566181 ABCC8Q09428 1581 aa34.82■■■■□ 3.16
STUB1-207ENST00000566181 SUPT5HO00267 1087 aaKnown RBP34.81■■■■□ 3.16
STUB1-207ENST00000566181 IFT140Q96RY7 1462 aa34.74■■■■□ 3.15
STUB1-207ENST00000566181 DNMBPQ6XZF7 1577 aa34.74■■■■□ 3.15
STUB1-207ENST00000566181 ZNF608Q9ULD9 1512 aaPredicted RBP34.63■■■■□ 3.13
STUB1-207ENST00000566181 OSCARQ8IYS5 282 aa34.57■■■■□ 3.12
STUB1-207ENST00000566181 POLA1P09884 1462 aaPredicted RBP34.5■■■■□ 3.11
STUB1-207ENST00000566181 TARBP1Q13395 1621 aaKnown RBP34.48■■■■□ 3.11
STUB1-207ENST00000566181 EIF4G3O43432 1585 aaKnown RBP34.43■■■■□ 3.1
STUB1-207ENST00000566181 AQRO60306 1485 aaKnown RBP eCLIP34.39■■■■□ 3.12e-7■■■■□ 22
STUB1-207ENST00000566181 SOGA1O94964 1423 aa34.39■■■■□ 3.1
STUB1-207ENST00000566181 CUX1P39880 1505 aa34.38■■■■□ 3.09
STUB1-207ENST00000566181 RAD54L2Q9Y4B4 1467 aa34.38■■■■□ 3.09
STUB1-207ENST00000566181 FGD5Q6ZNL6 1462 aa34.34■■■■□ 3.09
STUB1-207ENST00000566181 TDRD9Q8NDG6 1382 aaKnown RBP34.26■■■■□ 3.08
STUB1-207ENST00000566181 TRIM41Q8WV44 630 aa34.22■■■■□ 3.07
STUB1-207ENST00000566181 WDR97A6NE52 1622 aa34.16■■■■□ 3.06
STUB1-207ENST00000566181 FBLN2P98095 1184 aa34.12■■■■□ 3.05
STUB1-207ENST00000566181 CHD1O14646 1710 aa34.1■■■■□ 3.05
STUB1-207ENST00000566181 GRIN2BQ13224 1484 aa34.02■■■■□ 3.04
STUB1-207ENST00000566181 SNAPC4Q5SXM2 1469 aa34.02■■■■□ 3.04
STUB1-207ENST00000566181 ABCA10Q8WWZ4 1543 aa33.99■■■■□ 3.03
STUB1-207ENST00000566181 WRNQ14191 1432 aaPredicted RBP eCLIP33.99■■■■□ 3.03
STUB1-207ENST00000566181 RIMBP3CA6NJZ7 1639 aa33.99■■■■□ 3.03
STUB1-207ENST00000566181 RIMBP3BA6NNM3 1639 aa33.99■■■■□ 3.03
STUB1-207ENST00000566181 RIMBP3Q9UFD9 1639 aa33.99■■■■□ 3.03
STUB1-207ENST00000566181 MAGI1Q96QZ7 1491 aaPredicted RBP33.97■■■■□ 3.03
STUB1-207ENST00000566181 GAPVD1Q14C86 1478 aa33.96■■■■□ 3.03
STUB1-207ENST00000566181 TOP2BQ02880 1626 aa33.95■■■■□ 3.03
STUB1-207ENST00000566181 CHMP7Q8WUX9 453 aaPredicted RBP33.95■■■■□ 3.03
STUB1-207ENST00000566181 BIVM-ERCC5R4GMW8 1640 aa33.93■■■■□ 3.02
STUB1-207ENST00000566181 ARHGEF11O15085 1522 aa33.93■■■■□ 3.02
STUB1-207ENST00000566181 SYNJ1O43426 1573 aa33.91■■■■□ 3.02
STUB1-207ENST00000566181 PBRM1Q86U86 1689 aa33.88■■■■□ 3.01
STUB1-207ENST00000566181 ABCA5Q8WWZ7 1642 aa33.87■■■■□ 3.01
STUB1-207ENST00000566181 SYNJ2O15056 1496 aa33.86■■■■□ 3.01
STUB1-207ENST00000566181 CLASP1Q7Z460 1538 aa33.73■■■□□ 2.99
STUB1-207ENST00000566181 CYB5RLQ6IPT4 315 aa33.72■■■□□ 2.99
STUB1-207ENST00000566181 ARAP1Q96P48 1450 aa33.62■■■□□ 2.97
STUB1-207ENST00000566181 ERICH3Q5RHP9 1530 aa33.58■■■□□ 2.97
STUB1-207ENST00000566181 ADAMTS12P58397 1594 aa33.57■■■□□ 2.96
STUB1-207ENST00000566181 GRIN2AQ12879 1464 aa33.56■■■□□ 2.96
STUB1-207ENST00000566181 FHAD1B1AJZ9 1412 aa33.55■■■□□ 2.96
STUB1-207ENST00000566181 NUP160Q12769 1436 aa33.45■■■□□ 2.94
STUB1-207ENST00000566181 CEP170Q5SW79 1584 aa33.42■■■□□ 2.94
STUB1-207ENST00000566181 KIF27Q86VH2 1401 aa33.33■■■□□ 2.93
STUB1-207ENST00000566181 IGF1RP08069 1367 aa33.29■■■□□ 2.92
STUB1-207ENST00000566181 ERCC6L2Q5T890 1561 aa33.24■■■□□ 2.91
STUB1-207ENST00000566181 SHROOM2Q13796 1616 aa33.24■■■□□ 2.91
STUB1-207ENST00000566181 TRHP20396 242 aaPredicted RBP33.2■■■□□ 2.91
STUB1-207ENST00000566181 JPH4Q96JJ6 628 aa33.18■■■□□ 2.9
STUB1-207ENST00000566181 CUL7Q14999 1698 aa33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms