RNA–Protein interactions for RNA: ENST00000566138.5

ULK4P3-203, Transcript of ULK4 pseudogene 3, humanhuman

TSL 3

Gene ULK4P3, Length 533 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ULK4P3-203ENST00000566138 NISCHQ9Y2I1 1504 aa49.29■■■■■ 5.48
ULK4P3-203ENST00000566138 CCDC180Q9P1Z9 1646 aa43.98■■■■■ 4.63
ULK4P3-203ENST00000566138 ABCC9O60706 1549 aa43.31■■■■■ 4.52
ULK4P3-203ENST00000566138 RB1CC1Q8TDY2 1594 aa41.61■■■■■ 4.25
ULK4P3-203ENST00000566138 NACADO15069 1562 aa41.52■■■■■ 4.24
ULK4P3-203ENST00000566138 MYO15BQ96JP2 1530 aa41.27■■■■■ 4.2
ULK4P3-203ENST00000566138 DCAF8L2P0C7V8 631 aa41.23■■■■■ 4.19
ULK4P3-203ENST00000566138 ZCCHC6Q5VYS8 1495 aaKnown RBP40.96■■■■■ 4.15
ULK4P3-203ENST00000566138 DCAF1Q9Y4B6 1507 aa40.89■■■■■ 4.14
ULK4P3-203ENST00000566138 UNC13AQ9UPW8 1703 aa40.46■■■■■ 4.07
ULK4P3-203ENST00000566138 PABPN1Q86U42 306 aaKnown RBP eCLIP40.41■■■■■ 4.06
ULK4P3-203ENST00000566138 BICRAQ9NZM4 1560 aa40.29■■■■■ 4.04
ULK4P3-203ENST00000566138 DNAJC5BQ9UF47 199 aa40.16■■■■■ 4.02
ULK4P3-203ENST00000566138 SHROOM4Q9ULL8 1493 aa40.07■■■■■ 4
ULK4P3-203ENST00000566138 SCRIBQ14160 1630 aa39.93■■■■□ 3.98
ULK4P3-203ENST00000566138 EIF4G1Q04637 1599 aaKnown RBP39.29■■■■□ 3.88
ULK4P3-203ENST00000566138 CC2D2AQ9P2K1 1620 aa39.19■■■■□ 3.86
ULK4P3-203ENST00000566138 CECR2Q9BXF3 1484 aa39.04■■■■□ 3.84
ULK4P3-203ENST00000566138 NCAPD3P42695 1498 aa38.35■■■■□ 3.73
ULK4P3-203ENST00000566138 SMARCA4P51532 1647 aa38.27■■■■□ 3.72
ULK4P3-203ENST00000566138 BAZ1AQ9NRL2 1556 aaPredicted RBP38.25■■■■□ 3.71
ULK4P3-203ENST00000566138 ATAD2BQ9ULI0 1458 aa38.23■■■■□ 3.71
ULK4P3-203ENST00000566138 SMARCA2P51531 1590 aa38.19■■■■□ 3.7
ULK4P3-203ENST00000566138 HMGXB3Q12766 1538 aa38.07■■■■□ 3.68
ULK4P3-203ENST00000566138 PEG3Q9GZU2 1588 aa38.02■■■■□ 3.68
ULK4P3-203ENST00000566138 MROH2BQ7Z745 1585 aa37.9■■■■□ 3.66
ULK4P3-203ENST00000566138 BAZ1BQ9UIG0 1483 aaKnown RBP37.86■■■■□ 3.65
ULK4P3-203ENST00000566138 WIZO95785 1651 aa37.41■■■■□ 3.58
ULK4P3-203ENST00000566138 ERCC6Q03468 1493 aa37.4■■■■□ 3.58
ULK4P3-203ENST00000566138 RSF1Q96T23 1441 aaPredicted RBP37.4■■■■□ 3.58
ULK4P3-203ENST00000566138 LAMC3Q9Y6N6 1575 aa37.34■■■■□ 3.57
ULK4P3-203ENST00000566138 NESP48681 1621 aa37.33■■■■□ 3.57
ULK4P3-203ENST00000566138 CUX2O14529 1486 aa37.27■■■■□ 3.56
ULK4P3-203ENST00000566138 CADPSQ9ULU8 1353 aa37.19■■■■□ 3.54
ULK4P3-203ENST00000566138 PDS5BQ9NTI5 1447 aa37.15■■■■□ 3.54
ULK4P3-203ENST00000566138 TOP2AP11388 1531 aaKnown RBP37.1■■■■□ 3.53
ULK4P3-203ENST00000566138 THOC2Q8NI27 1593 aaKnown RBP36.9■■■■□ 3.5
ULK4P3-203ENST00000566138 CFTRP13569 1480 aa36.88■■■■□ 3.49
ULK4P3-203ENST00000566138 KIF21AQ7Z4S6 1674 aa36.83■■■■□ 3.49
ULK4P3-203ENST00000566138 MRC2Q9UBG0 1479 aa36.71■■■■□ 3.47
ULK4P3-203ENST00000566138 FANCD2Q9BXW9 1451 aa36.68■■■■□ 3.46
ULK4P3-203ENST00000566138 CCDC88BA6NC98 1476 aa36.67■■■■□ 3.46
ULK4P3-203ENST00000566138 CEP164Q9UPV0 1460 aa36.67■■■■□ 3.46
ULK4P3-203ENST00000566138 WDR62O43379 1518 aa36.61■■■■□ 3.45
ULK4P3-203ENST00000566138 DNAJC5Q9H3Z4 198 aa36.61■■■■□ 3.45
ULK4P3-203ENST00000566138 PRDM2Q13029 1718 aa36.39■■■■□ 3.42
ULK4P3-203ENST00000566138 URB2Q14146 1524 aaKnown RBP36.29■■■■□ 3.4
ULK4P3-203ENST00000566138 ABCC8Q09428 1581 aa36.17■■■■□ 3.38
ULK4P3-203ENST00000566138 TOPBP1Q92547 1522 aa36.04■■■■□ 3.36
ULK4P3-203ENST00000566138 SUPT5HO00267 1087 aaKnown RBP36.03■■■■□ 3.36
ULK4P3-203ENST00000566138 IFT140Q96RY7 1462 aa35.98■■■■□ 3.35
ULK4P3-203ENST00000566138 DNMBPQ6XZF7 1577 aa35.96■■■■□ 3.35
ULK4P3-203ENST00000566138 ZNF608Q9ULD9 1512 aaPredicted RBP35.73■■■■□ 3.31
ULK4P3-203ENST00000566138 POLA1P09884 1462 aaPredicted RBP35.71■■■■□ 3.31
ULK4P3-203ENST00000566138 OSCARQ8IYS5 282 aa35.68■■■■□ 3.3
ULK4P3-203ENST00000566138 TARBP1Q13395 1621 aaKnown RBP35.65■■■■□ 3.3
ULK4P3-203ENST00000566138 SOGA1O94964 1423 aa35.59■■■■□ 3.29
ULK4P3-203ENST00000566138 CUX1P39880 1505 aa35.57■■■■□ 3.29
ULK4P3-203ENST00000566138 EIF4G3O43432 1585 aaKnown RBP35.55■■■■□ 3.28
ULK4P3-203ENST00000566138 FGD5Q6ZNL6 1462 aa35.54■■■■□ 3.28
ULK4P3-203ENST00000566138 AQRO60306 1485 aaKnown RBP eCLIP35.51■■■■□ 3.28
ULK4P3-203ENST00000566138 RAD54L2Q9Y4B4 1467 aa35.5■■■■□ 3.27
ULK4P3-203ENST00000566138 WDR97A6NE52 1622 aa35.5■■■■□ 3.27
ULK4P3-203ENST00000566138 TDRD9Q8NDG6 1382 aaKnown RBP35.38■■■■□ 3.25
ULK4P3-203ENST00000566138 WRNQ14191 1432 aaPredicted RBP eCLIP35.27■■■■□ 3.24
ULK4P3-203ENST00000566138 ABCA10Q8WWZ4 1543 aa35.26■■■■□ 3.23
ULK4P3-203ENST00000566138 GRIN2BQ13224 1484 aa35.23■■■■□ 3.23
ULK4P3-203ENST00000566138 TOP2BQ02880 1626 aa35.21■■■■□ 3.23
ULK4P3-203ENST00000566138 MAGI1Q96QZ7 1491 aaPredicted RBP35.21■■■■□ 3.23
ULK4P3-203ENST00000566138 BIVM-ERCC5R4GMW8 1640 aa35.18■■■■□ 3.22
ULK4P3-203ENST00000566138 GAPVD1Q14C86 1478 aa35.16■■■■□ 3.22
ULK4P3-203ENST00000566138 SNAPC4Q5SXM2 1469 aa35.15■■■■□ 3.22
ULK4P3-203ENST00000566138 FBLN2P98095 1184 aa35.14■■■■□ 3.22
ULK4P3-203ENST00000566138 CHD1O14646 1710 aa35.11■■■■□ 3.21
ULK4P3-203ENST00000566138 SYNJ1O43426 1573 aa35.09■■■■□ 3.21
ULK4P3-203ENST00000566138 CHMP7Q8WUX9 453 aaPredicted RBP35.08■■■■□ 3.21
ULK4P3-203ENST00000566138 ABCA5Q8WWZ7 1642 aa35.06■■■■□ 3.2
ULK4P3-203ENST00000566138 SYNJ2O15056 1496 aa35.05■■■■□ 3.2
ULK4P3-203ENST00000566138 TRIM41Q8WV44 630 aa35.04■■■■□ 3.2
ULK4P3-203ENST00000566138 ARHGEF11O15085 1522 aa34.98■■■■□ 3.19
ULK4P3-203ENST00000566138 RIMBP3CA6NJZ7 1639 aa34.97■■■■□ 3.19
ULK4P3-203ENST00000566138 RIMBP3BA6NNM3 1639 aa34.97■■■■□ 3.19
ULK4P3-203ENST00000566138 RIMBP3Q9UFD9 1639 aa34.97■■■■□ 3.19
ULK4P3-203ENST00000566138 PBRM1Q86U86 1689 aa34.97■■■■□ 3.19
ULK4P3-203ENST00000566138 CLASP1Q7Z460 1538 aa34.86■■■■□ 3.17
ULK4P3-203ENST00000566138 ERICH3Q5RHP9 1530 aa34.84■■■■□ 3.17
ULK4P3-203ENST00000566138 FHAD1B1AJZ9 1412 aa34.79■■■■□ 3.16
ULK4P3-203ENST00000566138 GRIN2AQ12879 1464 aa34.75■■■■□ 3.15
ULK4P3-203ENST00000566138 ADAMTS12P58397 1594 aa34.74■■■■□ 3.15
ULK4P3-203ENST00000566138 CYB5RLQ6IPT4 315 aa34.7■■■■□ 3.15
ULK4P3-203ENST00000566138 NUP160Q12769 1436 aa34.66■■■■□ 3.14
ULK4P3-203ENST00000566138 ARAP1Q96P48 1450 aa34.65■■■■□ 3.14
ULK4P3-203ENST00000566138 KIF27Q86VH2 1401 aa34.61■■■■□ 3.13
ULK4P3-203ENST00000566138 IGF1RP08069 1367 aa34.52■■■■□ 3.12
ULK4P3-203ENST00000566138 CEP170Q5SW79 1584 aa34.52■■■■□ 3.12
ULK4P3-203ENST00000566138 CUL7Q14999 1698 aa34.38■■■■□ 3.09
ULK4P3-203ENST00000566138 SHROOM2Q13796 1616 aa34.38■■■■□ 3.09
ULK4P3-203ENST00000566138 JPH4Q96JJ6 628 aa34.33■■■■□ 3.09
ULK4P3-203ENST00000566138 CARMIL1Q5VZK9 1371 aa34.29■■■■□ 3.08
ULK4P3-203ENST00000566138 KIAA0586Q9BVV6 1533 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms