RNA–Protein interactions for RNA: ENST00000566106.1

SHISA9-204, Transcript of shisa family member 9, humanhuman

TSL 4

Gene SHISA9, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-204ENST00000566106 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
SHISA9-204ENST00000566106 ABCC9O60706 1549 aa17.88■□□□□ 0.45
SHISA9-204ENST00000566106 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
SHISA9-204ENST00000566106 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
SHISA9-204ENST00000566106 RB1CC1Q8TDY2 1594 aa16.74■□□□□ 0.27
SHISA9-204ENST00000566106 PABPN1Q86U42 306 aaKnown RBP eCLIP16.62■□□□□ 0.25
SHISA9-204ENST00000566106 NACADO15069 1562 aa16.52■□□□□ 0.24
SHISA9-204ENST00000566106 DCAF8L2P0C7V8 631 aa16.47■□□□□ 0.23
SHISA9-204ENST00000566106 BICRAQ9NZM4 1560 aa16.26■□□□□ 0.19
SHISA9-204ENST00000566106 UNC13AQ9UPW8 1703 aa16.22■□□□□ 0.19
SHISA9-204ENST00000566106 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
SHISA9-204ENST00000566106 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.18
SHISA9-204ENST00000566106 DNAJC5Q9H3Z4 198 aa16.14■□□□□ 0.17
SHISA9-204ENST00000566106 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
SHISA9-204ENST00000566106 SHROOM4Q9ULL8 1493 aa16.03■□□□□ 0.16
SHISA9-204ENST00000566106 EIF4G1Q04637 1599 aaKnown RBP15.93■□□□□ 0.14
SHISA9-204ENST00000566106 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
SHISA9-204ENST00000566106 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
SHISA9-204ENST00000566106 DCAF1Q9Y4B6 1507 aa15.76■□□□□ 0.11
SHISA9-204ENST00000566106 CUX2O14529 1486 aa15.57■□□□□ 0.08
SHISA9-204ENST00000566106 ERCC6Q03468 1493 aa15.47■□□□□ 0.07
SHISA9-204ENST00000566106 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
SHISA9-204ENST00000566106 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
SHISA9-204ENST00000566106 NESP48681 1621 aa15.21■□□□□ 0.02
SHISA9-204ENST00000566106 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
SHISA9-204ENST00000566106 HMGXB3Q12766 1538 aa15.1■□□□□ 0.01
SHISA9-204ENST00000566106 SMARCA2P51531 1590 aa15.09■□□□□ 0.01
SHISA9-204ENST00000566106 THOC2Q8NI27 1593 aaKnown RBP15.08■□□□□ 0
SHISA9-204ENST00000566106 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
SHISA9-204ENST00000566106 SMARCA4P51532 1647 aa15□□□□□ -0.01
SHISA9-204ENST00000566106 PDS5BQ9NTI5 1447 aa14.98□□□□□ -0.01
SHISA9-204ENST00000566106 LAMC3Q9Y6N6 1575 aa14.98□□□□□ -0.01
SHISA9-204ENST00000566106 BAZ1AQ9NRL2 1556 aaPredicted RBP14.89□□□□□ -0.03
SHISA9-204ENST00000566106 KIF21AQ7Z4S6 1674 aa14.88□□□□□ -0.03
SHISA9-204ENST00000566106 MRC2Q9UBG0 1479 aa14.86□□□□□ -0.03
SHISA9-204ENST00000566106 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
SHISA9-204ENST00000566106 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
SHISA9-204ENST00000566106 CADPSQ9ULU8 1353 aa14.84□□□□□ -0.03
SHISA9-204ENST00000566106 WDR62O43379 1518 aa14.82□□□□□ -0.04
SHISA9-204ENST00000566106 MROH2BQ7Z745 1585 aa14.76□□□□□ -0.05
SHISA9-204ENST00000566106 CEP164Q9UPV0 1460 aa14.7□□□□□ -0.06
SHISA9-204ENST00000566106 FANCD2Q9BXW9 1451 aa14.65□□□□□ -0.06
SHISA9-204ENST00000566106 RIMBP3CA6NJZ7 1639 aa14.6□□□□□ -0.07
SHISA9-204ENST00000566106 RIMBP3BA6NNM3 1639 aa14.6□□□□□ -0.07
SHISA9-204ENST00000566106 RIMBP3Q9UFD9 1639 aa14.6□□□□□ -0.07
SHISA9-204ENST00000566106 CFTRP13569 1480 aa14.55□□□□□ -0.08
SHISA9-204ENST00000566106 ARHGEF11O15085 1522 aa14.55□□□□□ -0.08
SHISA9-204ENST00000566106 URB2Q14146 1524 aaKnown RBP14.55□□□□□ -0.08
SHISA9-204ENST00000566106 CYB5RLQ6IPT4 315 aa14.54□□□□□ -0.08
SHISA9-204ENST00000566106 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
SHISA9-204ENST00000566106 SUPT5HO00267 1087 aaKnown RBP14.52□□□□□ -0.09
SHISA9-204ENST00000566106 WIZO95785 1651 aa14.51□□□□□ -0.09
SHISA9-204ENST00000566106 AEBP2Q6ZN18 517 aaPredicted RBP14.49□□□□□ -0.09
SHISA9-204ENST00000566106 ZNF608Q9ULD9 1512 aaPredicted RBP14.46□□□□□ -0.09
SHISA9-204ENST00000566106 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
SHISA9-204ENST00000566106 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
SHISA9-204ENST00000566106 ARAP1Q96P48 1450 aa14.38□□□□□ -0.11
SHISA9-204ENST00000566106 TOP2AP11388 1531 aaKnown RBP14.33□□□□□ -0.12
SHISA9-204ENST00000566106 FBLN2P98095 1184 aa14.33□□□□□ -0.12
SHISA9-204ENST00000566106 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
SHISA9-204ENST00000566106 EIF4G3O43432 1585 aaKnown RBP14.3□□□□□ -0.12
SHISA9-204ENST00000566106 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
SHISA9-204ENST00000566106 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
SHISA9-204ENST00000566106 CHD1O14646 1710 aa14.21□□□□□ -0.13
SHISA9-204ENST00000566106 CCDC88BA6NC98 1476 aa14.2□□□□□ -0.14
SHISA9-204ENST00000566106 DNMBPQ6XZF7 1577 aa14.19□□□□□ -0.14
SHISA9-204ENST00000566106 PRDM2Q13029 1718 aa14.17□□□□□ -0.14
SHISA9-204ENST00000566106 TARBP1Q13395 1621 aaKnown RBP14.16□□□□□ -0.14
SHISA9-204ENST00000566106 TDRD9Q8NDG6 1382 aaKnown RBP14.15□□□□□ -0.14
SHISA9-204ENST00000566106 POLA1P09884 1462 aaPredicted RBP14.14□□□□□ -0.15
SHISA9-204ENST00000566106 CHMP7Q8WUX9 453 aaPredicted RBP14.14□□□□□ -0.15
SHISA9-204ENST00000566106 CLASP1Q7Z460 1538 aa14.12□□□□□ -0.15
SHISA9-204ENST00000566106 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
SHISA9-204ENST00000566106 RAD54L2Q9Y4B4 1467 aa14.12□□□□□ -0.15
SHISA9-204ENST00000566106 SOGA1O94964 1423 aa14.09□□□□□ -0.15
SHISA9-204ENST00000566106 SYNJ1O43426 1573 aa14.08□□□□□ -0.16
SHISA9-204ENST00000566106 CHIC1Q5VXU3 224 aa14.06□□□□□ -0.16
SHISA9-204ENST00000566106 GAPVD1Q14C86 1478 aa14.06□□□□□ -0.16
SHISA9-204ENST00000566106 MAGI1Q96QZ7 1491 aaPredicted RBP14.04□□□□□ -0.16
SHISA9-204ENST00000566106 SYNJ2O15056 1496 aa14.01□□□□□ -0.17
SHISA9-204ENST00000566106 GRIN2BQ13224 1484 aa14□□□□□ -0.17
SHISA9-204ENST00000566106 FGD5Q6ZNL6 1462 aa13.99□□□□□ -0.17
SHISA9-204ENST00000566106 WDR97A6NE52 1622 aa13.98□□□□□ -0.17
SHISA9-204ENST00000566106 CUX1P39880 1505 aa13.89□□□□□ -0.19
SHISA9-204ENST00000566106 ERCC6L2Q5T890 1561 aa13.88□□□□□ -0.19
SHISA9-204ENST00000566106 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
SHISA9-204ENST00000566106 GRIN2AQ12879 1464 aa13.82□□□□□ -0.2
SHISA9-204ENST00000566106 CEP170Q5SW79 1584 aa13.81□□□□□ -0.2
SHISA9-204ENST00000566106 FAM69CQ0P6D2 419 aa13.8□□□□□ -0.2
SHISA9-204ENST00000566106 NUP160Q12769 1436 aa13.8□□□□□ -0.2
SHISA9-204ENST00000566106 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
SHISA9-204ENST00000566106 PBRM1Q86U86 1689 aa13.79□□□□□ -0.2
SHISA9-204ENST00000566106 KDM4FA0A1W2PPD8 638 aa13.79□□□□□ -0.2
SHISA9-204ENST00000566106 ABCA5Q8WWZ7 1642 aa13.77□□□□□ -0.21
SHISA9-204ENST00000566106 ABCC10Q5T3U5 1492 aa13.74□□□□□ -0.21
SHISA9-204ENST00000566106 PRG4Q92954 1404 aaPredicted RBP13.73□□□□□ -0.21
SHISA9-204ENST00000566106 ADAMTS12P58397 1594 aa13.72□□□□□ -0.21
SHISA9-204ENST00000566106 KIF13AQ9H1H9 1805 aa13.72□□□□□ -0.21
SHISA9-204ENST00000566106 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
SHISA9-204ENST00000566106 FHAD1B1AJZ9 1412 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms