RNA–Protein interactions for RNA: ENST00000566086.1

EIF3C-208, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 2

Gene EIF3C, Length 424 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-208ENST00000566086 NISCHQ9Y2I1 1504 aa26.13■■□□□ 1.77
EIF3C-208ENST00000566086 ABCC9O60706 1549 aa23.85■■□□□ 1.41
EIF3C-208ENST00000566086 CCDC180Q9P1Z9 1646 aa23.59■■□□□ 1.37
EIF3C-208ENST00000566086 DNAJC5BQ9UF47 199 aa22.59■■□□□ 1.21
EIF3C-208ENST00000566086 RB1CC1Q8TDY2 1594 aa22.54■■□□□ 1.2
EIF3C-208ENST00000566086 NACADO15069 1562 aa22.29■■□□□ 1.16
EIF3C-208ENST00000566086 UNC13AQ9UPW8 1703 aa22.21■■□□□ 1.15
EIF3C-208ENST00000566086 DCAF8L2P0C7V8 631 aa22.18■■□□□ 1.14
EIF3C-208ENST00000566086 PABPN1Q86U42 306 aaKnown RBP eCLIP22.15■■□□□ 1.14
EIF3C-208ENST00000566086 BICRAQ9NZM4 1560 aa21.96■■□□□ 1.11
EIF3C-208ENST00000566086 MYO15BQ96JP2 1530 aa21.84■■□□□ 1.09
EIF3C-208ENST00000566086 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
EIF3C-208ENST00000566086 SCRIBQ14160 1630 aa21.55■■□□□ 1.04
EIF3C-208ENST00000566086 CC2D2AQ9P2K1 1620 aa21.54■■□□□ 1.04
EIF3C-208ENST00000566086 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
EIF3C-208ENST00000566086 SHROOM4Q9ULL8 1493 aa21.47■■□□□ 1.03
EIF3C-208ENST00000566086 CECR2Q9BXF3 1484 aa21.46■■□□□ 1.03
EIF3C-208ENST00000566086 EIF4G1Q04637 1599 aaKnown RBP21.41■■□□□ 1.02
EIF3C-208ENST00000566086 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
EIF3C-208ENST00000566086 CUX2O14529 1486 aa20.56■□□□□ 0.88
EIF3C-208ENST00000566086 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
EIF3C-208ENST00000566086 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
EIF3C-208ENST00000566086 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
EIF3C-208ENST00000566086 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
EIF3C-208ENST00000566086 NESP48681 1621 aa20.45■□□□□ 0.86
EIF3C-208ENST00000566086 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
EIF3C-208ENST00000566086 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
EIF3C-208ENST00000566086 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
EIF3C-208ENST00000566086 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
EIF3C-208ENST00000566086 BAZ1AQ9NRL2 1556 aaPredicted RBP20.28■□□□□ 0.84
EIF3C-208ENST00000566086 KIF21AQ7Z4S6 1674 aa20.24■□□□□ 0.83
EIF3C-208ENST00000566086 PEG3Q9GZU2 1588 aa20.22■□□□□ 0.83
EIF3C-208ENST00000566086 MROH2BQ7Z745 1585 aa20.18■□□□□ 0.82
EIF3C-208ENST00000566086 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
EIF3C-208ENST00000566086 PDS5BQ9NTI5 1447 aa20.02■□□□□ 0.79
EIF3C-208ENST00000566086 WIZO95785 1651 aa19.98■□□□□ 0.79
EIF3C-208ENST00000566086 CADPSQ9ULU8 1353 aa19.92■□□□□ 0.78
EIF3C-208ENST00000566086 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
EIF3C-208ENST00000566086 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
EIF3C-208ENST00000566086 WDR62O43379 1518 aa19.89■□□□□ 0.77
EIF3C-208ENST00000566086 CEP164Q9UPV0 1460 aa19.79■□□□□ 0.76
EIF3C-208ENST00000566086 FANCD2Q9BXW9 1451 aa19.75■□□□□ 0.75
EIF3C-208ENST00000566086 CFTRP13569 1480 aa19.67■□□□□ 0.74
EIF3C-208ENST00000566086 URB2Q14146 1524 aaKnown RBP19.64■□□□□ 0.73
EIF3C-208ENST00000566086 TOP2AP11388 1531 aaKnown RBP19.62■□□□□ 0.73
EIF3C-208ENST00000566086 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
EIF3C-208ENST00000566086 PRDM2Q13029 1718 aa19.59■□□□□ 0.73
EIF3C-208ENST00000566086 OSCARQ8IYS5 282 aa19.56■□□□□ 0.72
EIF3C-208ENST00000566086 RIMBP3CA6NJZ7 1639 aa19.47■□□□□ 0.71
EIF3C-208ENST00000566086 RIMBP3BA6NNM3 1639 aa19.47■□□□□ 0.71
EIF3C-208ENST00000566086 RIMBP3Q9UFD9 1639 aa19.47■□□□□ 0.71
EIF3C-208ENST00000566086 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
EIF3C-208ENST00000566086 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
EIF3C-208ENST00000566086 IFT140Q96RY7 1462 aa19.37■□□□□ 0.69
EIF3C-208ENST00000566086 TOPBP1Q92547 1522 aa19.36■□□□□ 0.69
EIF3C-208ENST00000566086 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
EIF3C-208ENST00000566086 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
EIF3C-208ENST00000566086 CHD1O14646 1710 aa19.31■□□□□ 0.68
EIF3C-208ENST00000566086 DNMBPQ6XZF7 1577 aa19.27■□□□□ 0.68
EIF3C-208ENST00000566086 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
EIF3C-208ENST00000566086 AQRO60306 1485 aaKnown RBP eCLIP19.22■□□□□ 0.67
EIF3C-208ENST00000566086 ABCC8Q09428 1581 aa19.21■□□□□ 0.67
EIF3C-208ENST00000566086 CYB5RLQ6IPT4 315 aa19.18■□□□□ 0.66
EIF3C-208ENST00000566086 POLA1P09884 1462 aaPredicted RBP19.15■□□□□ 0.66
EIF3C-208ENST00000566086 ARAP1Q96P48 1450 aa19.14■□□□□ 0.65
EIF3C-208ENST00000566086 RAD54L2Q9Y4B4 1467 aa19.12■□□□□ 0.65
EIF3C-208ENST00000566086 FBLN2P98095 1184 aa19.12■□□□□ 0.65
EIF3C-208ENST00000566086 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
EIF3C-208ENST00000566086 TRHP20396 242 aaPredicted RBP19.05■□□□□ 0.64
EIF3C-208ENST00000566086 SOGA1O94964 1423 aa19.02■□□□□ 0.64
EIF3C-208ENST00000566086 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.63
EIF3C-208ENST00000566086 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
EIF3C-208ENST00000566086 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
EIF3C-208ENST00000566086 CUX1P39880 1505 aa18.97■□□□□ 0.63
EIF3C-208ENST00000566086 WDR97A6NE52 1622 aa18.95■□□□□ 0.62
EIF3C-208ENST00000566086 PBRM1Q86U86 1689 aa18.93■□□□□ 0.62
EIF3C-208ENST00000566086 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
EIF3C-208ENST00000566086 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
EIF3C-208ENST00000566086 CHMP7Q8WUX9 453 aaPredicted RBP18.89■□□□□ 0.61
EIF3C-208ENST00000566086 GRIN2BQ13224 1484 aa18.88■□□□□ 0.61
EIF3C-208ENST00000566086 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
EIF3C-208ENST00000566086 GAPVD1Q14C86 1478 aa18.8■□□□□ 0.6
EIF3C-208ENST00000566086 ABCA5Q8WWZ7 1642 aa18.79■□□□□ 0.6
EIF3C-208ENST00000566086 ERCC6L2Q5T890 1561 aa18.76■□□□□ 0.59
EIF3C-208ENST00000566086 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
EIF3C-208ENST00000566086 GRIN2AQ12879 1464 aa18.67■□□□□ 0.58
EIF3C-208ENST00000566086 ADAMTS12P58397 1594 aa18.67■□□□□ 0.58
EIF3C-208ENST00000566086 CEP170Q5SW79 1584 aa18.67■□□□□ 0.58
EIF3C-208ENST00000566086 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.57
EIF3C-208ENST00000566086 BIVM-ERCC5R4GMW8 1640 aa18.62■□□□□ 0.57
EIF3C-208ENST00000566086 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
EIF3C-208ENST00000566086 SUPT5HO00267 1087 aaKnown RBP18.59■□□□□ 0.57
EIF3C-208ENST00000566086 NUP160Q12769 1436 aa18.58■□□□□ 0.57
EIF3C-208ENST00000566086 TOP2BQ02880 1626 aa18.58■□□□□ 0.56
EIF3C-208ENST00000566086 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
EIF3C-208ENST00000566086 KIF13AQ9H1H9 1805 aa18.57■□□□□ 0.56
EIF3C-208ENST00000566086 FHAD1B1AJZ9 1412 aa18.52■□□□□ 0.56
EIF3C-208ENST00000566086 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
EIF3C-208ENST00000566086 PRG4Q92954 1404 aaPredicted RBP18.45■□□□□ 0.54
EIF3C-208ENST00000566086 RUSC2Q8N2Y8 1516 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms