RNA–Protein interactions for RNA: ENST00000566068.1

PML-216, Transcript of promyelocytic leukemia, humanhuman

TSL 3

Gene PML, Length 834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-216ENST00000566068 NISCHQ9Y2I1 1504 aa32.61■■■□□ 2.81
PML-216ENST00000566068 CCDC180Q9P1Z9 1646 aa29.2■■■□□ 2.26
PML-216ENST00000566068 ABCC9O60706 1549 aa28.94■■■□□ 2.22
PML-216ENST00000566068 RB1CC1Q8TDY2 1594 aa27.64■■■□□ 2.01
PML-216ENST00000566068 NACADO15069 1562 aa27.5■■□□□ 1.99
PML-216ENST00000566068 DCAF8L2P0C7V8 631 aa27.28■■□□□ 1.96
PML-216ENST00000566068 MYO15BQ96JP2 1530 aa27.21■■□□□ 1.95
PML-216ENST00000566068 ZCCHC6Q5VYS8 1495 aaKnown RBP27.12■■□□□ 1.93
PML-216ENST00000566068 UNC13AQ9UPW8 1703 aa27.1■■□□□ 1.93
PML-216ENST00000566068 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.9
PML-216ENST00000566068 PABPN1Q86U42 306 aaKnown RBP eCLIP26.93■■□□□ 1.9
PML-216ENST00000566068 DNAJC5BQ9UF47 199 aa26.92■■□□□ 1.9
PML-216ENST00000566068 BICRAQ9NZM4 1560 aa26.89■■□□□ 1.9
PML-216ENST00000566068 SCRIBQ14160 1630 aa26.64■■□□□ 1.85
PML-216ENST00000566068 SHROOM4Q9ULL8 1493 aa26.49■■□□□ 1.83
PML-216ENST00000566068 EIF4G1Q04637 1599 aaKnown RBP26.19■■□□□ 1.78
PML-216ENST00000566068 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
PML-216ENST00000566068 CECR2Q9BXF3 1484 aa26.03■■□□□ 1.76
PML-216ENST00000566068 SMARCA4P51532 1647 aa25.42■■□□□ 1.66
PML-216ENST00000566068 NCAPD3P42695 1498 aa25.37■■□□□ 1.65
PML-216ENST00000566068 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
PML-216ENST00000566068 BAZ1AQ9NRL2 1556 aaPredicted RBP25.29■■□□□ 1.64
PML-216ENST00000566068 SMARCA2P51531 1590 aa25.28■■□□□ 1.64
PML-216ENST00000566068 HMGXB3Q12766 1538 aa25.26■■□□□ 1.63
PML-216ENST00000566068 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
PML-216ENST00000566068 MROH2BQ7Z745 1585 aa25.16■■□□□ 1.62
PML-216ENST00000566068 BAZ1BQ9UIG0 1483 aaKnown RBP25.11■■□□□ 1.61
PML-216ENST00000566068 NESP48681 1621 aa24.95■■□□□ 1.58
PML-216ENST00000566068 ERCC6Q03468 1493 aa24.94■■□□□ 1.58
PML-216ENST00000566068 WIZO95785 1651 aa24.88■■□□□ 1.57
PML-216ENST00000566068 CUX2O14529 1486 aa24.83■■□□□ 1.56
PML-216ENST00000566068 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
PML-216ENST00000566068 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.54
PML-216ENST00000566068 RSF1Q96T23 1441 aaPredicted RBP24.69■■□□□ 1.54
PML-216ENST00000566068 KIF21AQ7Z4S6 1674 aa24.67■■□□□ 1.54
PML-216ENST00000566068 CADPSQ9ULU8 1353 aa24.59■■□□□ 1.53
PML-216ENST00000566068 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
PML-216ENST00000566068 PDS5BQ9NTI5 1447 aa24.57■■□□□ 1.52
PML-216ENST00000566068 DNAJC5Q9H3Z4 198 aa24.48■■□□□ 1.51
PML-216ENST00000566068 MRC2Q9UBG0 1479 aa24.41■■□□□ 1.5
PML-216ENST00000566068 CFTRP13569 1480 aa24.4■■□□□ 1.5
PML-216ENST00000566068 WDR62O43379 1518 aa24.38■■□□□ 1.49
PML-216ENST00000566068 FANCD2Q9BXW9 1451 aa24.35■■□□□ 1.49
PML-216ENST00000566068 CEP164Q9UPV0 1460 aa24.35■■□□□ 1.49
PML-216ENST00000566068 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
PML-216ENST00000566068 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
PML-216ENST00000566068 URB2Q14146 1524 aaKnown RBP24.17■■□□□ 1.46
PML-216ENST00000566068 SUPT5HO00267 1087 aaKnown RBP24.09■■□□□ 1.45
PML-216ENST00000566068 TOPBP1Q92547 1522 aa23.93■■□□□ 1.42
PML-216ENST00000566068 DNMBPQ6XZF7 1577 aa23.87■■□□□ 1.41
PML-216ENST00000566068 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
PML-216ENST00000566068 ZNF608Q9ULD9 1512 aaPredicted RBP23.84■■□□□ 1.41
PML-216ENST00000566068 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
PML-216ENST00000566068 EIF4G3O43432 1585 aaKnown RBP23.75■■□□□ 1.39
PML-216ENST00000566068 TARBP1Q13395 1621 aaKnown RBP23.73■■□□□ 1.39
PML-216ENST00000566068 POLA1P09884 1462 aaPredicted RBP23.71■■□□□ 1.39
PML-216ENST00000566068 OSCARQ8IYS5 282 aa23.63■■□□□ 1.37
PML-216ENST00000566068 CUX1P39880 1505 aa23.63■■□□□ 1.37
PML-216ENST00000566068 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.371e-6■■■■■ 29.8
PML-216ENST00000566068 RAD54L2Q9Y4B4 1467 aa23.61■■□□□ 1.37
PML-216ENST00000566068 FGD5Q6ZNL6 1462 aa23.59■■□□□ 1.37
PML-216ENST00000566068 SOGA1O94964 1423 aa23.53■■□□□ 1.36
PML-216ENST00000566068 CHD1O14646 1710 aa23.52■■□□□ 1.36
PML-216ENST00000566068 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
PML-216ENST00000566068 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
PML-216ENST00000566068 TDRD9Q8NDG6 1382 aaKnown RBP23.48■■□□□ 1.35
PML-216ENST00000566068 RIMBP3CA6NJZ7 1639 aa23.45■■□□□ 1.34
PML-216ENST00000566068 RIMBP3BA6NNM3 1639 aa23.45■■□□□ 1.34
PML-216ENST00000566068 RIMBP3Q9UFD9 1639 aa23.45■■□□□ 1.34
PML-216ENST00000566068 SNAPC4Q5SXM2 1469 aa23.4■■□□□ 1.34
PML-216ENST00000566068 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
PML-216ENST00000566068 PBRM1Q86U86 1689 aa23.34■■□□□ 1.33
PML-216ENST00000566068 GRIN2BQ13224 1484 aa23.33■■□□□ 1.33
PML-216ENST00000566068 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.32
PML-216ENST00000566068 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.32
PML-216ENST00000566068 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
PML-216ENST00000566068 FBLN2P98095 1184 aa23.32■■□□□ 1.32
PML-216ENST00000566068 BIVM-ERCC5R4GMW8 1640 aa23.32■■□□□ 1.32
PML-216ENST00000566068 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
PML-216ENST00000566068 TOP2BQ02880 1626 aa23.3■■□□□ 1.32
PML-216ENST00000566068 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
PML-216ENST00000566068 WRNQ14191 1432 aaPredicted RBP eCLIP23.27■■□□□ 1.32
PML-216ENST00000566068 CLASP1Q7Z460 1538 aa23.25■■□□□ 1.31
PML-216ENST00000566068 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
PML-216ENST00000566068 ARAP1Q96P48 1450 aa23.18■■□□□ 1.3
PML-216ENST00000566068 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
PML-216ENST00000566068 ADAMTS12P58397 1594 aa23.13■■□□□ 1.29
PML-216ENST00000566068 CYB5RLQ6IPT4 315 aa23.09■■□□□ 1.29
PML-216ENST00000566068 GRIN2AQ12879 1464 aa23.06■■□□□ 1.28
PML-216ENST00000566068 ERICH3Q5RHP9 1530 aa23.03■■□□□ 1.28
PML-216ENST00000566068 CEP170Q5SW79 1584 aa23.01■■□□□ 1.27
PML-216ENST00000566068 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
PML-216ENST00000566068 NUP160Q12769 1436 aa22.98■■□□□ 1.27
PML-216ENST00000566068 ERCC6L2Q5T890 1561 aa22.93■■□□□ 1.26
PML-216ENST00000566068 SHROOM2Q13796 1616 aa22.89■■□□□ 1.25
PML-216ENST00000566068 RUSC2Q8N2Y8 1516 aa22.82■■□□□ 1.24
PML-216ENST00000566068 KIF27Q86VH2 1401 aa22.78■■□□□ 1.24
PML-216ENST00000566068 CUL7Q14999 1698 aa22.76■■□□□ 1.23
PML-216ENST00000566068 IGF1RP08069 1367 aa22.75■■□□□ 1.23
PML-216ENST00000566068 TRHP20396 242 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms