RNA–Protein interactions for RNA: ENST00000566055.5

SIRPB1-212, Transcript of signal regulatory protein beta 1, humanhuman

TSL 3

Gene SIRPB1, Length 928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-212ENST00000566055 AEBP2Q6ZN18 517 aaPredicted RBP29.14■■■□□ 2.26
SIRPB1-212ENST00000566055 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
SIRPB1-212ENST00000566055 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
SIRPB1-212ENST00000566055 ABCC9O60706 1549 aa26.23■■□□□ 1.79
SIRPB1-212ENST00000566055 PHF23Q9BUL5 403 aaPredicted RBP25.66■■□□□ 1.7
SIRPB1-212ENST00000566055 CCDC180Q9P1Z9 1646 aa25.59■■□□□ 1.69
SIRPB1-212ENST00000566055 DNAJC5BQ9UF47 199 aa25.11■■□□□ 1.61
SIRPB1-212ENST00000566055 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.54
SIRPB1-212ENST00000566055 SENP3Q9H4L4 574 aaPredicted RBP24.64■■□□□ 1.54
SIRPB1-212ENST00000566055 PABPN1Q86U42 306 aaKnown RBP eCLIP24.47■■□□□ 1.51
SIRPB1-212ENST00000566055 DCAF8L2P0C7V8 631 aa24.45■■□□□ 1.5
SIRPB1-212ENST00000566055 NACADO15069 1562 aa24.37■■□□□ 1.49
SIRPB1-212ENST00000566055 UNC13AQ9UPW8 1703 aa24.07■■□□□ 1.44
SIRPB1-212ENST00000566055 BICRAQ9NZM4 1560 aa24■■□□□ 1.43
SIRPB1-212ENST00000566055 PLPPR3Q6T4P5 718 aa23.92■■□□□ 1.42
SIRPB1-212ENST00000566055 MYO15BQ96JP2 1530 aa23.86■■□□□ 1.41
SIRPB1-212ENST00000566055 CECR2Q9BXF3 1484 aa23.64■■□□□ 1.38
SIRPB1-212ENST00000566055 CC2D2AQ9P2K1 1620 aa23.59■■□□□ 1.37
SIRPB1-212ENST00000566055 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
SIRPB1-212ENST00000566055 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
SIRPB1-212ENST00000566055 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
SIRPB1-212ENST00000566055 EIF4G1Q04637 1599 aaKnown RBP23.43■■□□□ 1.34
SIRPB1-212ENST00000566055 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
SIRPB1-212ENST00000566055 DNAJC5Q9H3Z4 198 aa23.29■■□□□ 1.32
SIRPB1-212ENST00000566055 FOXD1Q16676 465 aa22.77■■□□□ 1.24
SIRPB1-212ENST00000566055 CUX2O14529 1486 aa22.66■■□□□ 1.22
SIRPB1-212ENST00000566055 ERCC6Q03468 1493 aa22.64■■□□□ 1.21
SIRPB1-212ENST00000566055 NCAPD3P42695 1498 aa22.57■■□□□ 1.2
SIRPB1-212ENST00000566055 ATAD2BQ9ULI0 1458 aa22.46■■□□□ 1.19
SIRPB1-212ENST00000566055 NESP48681 1621 aa22.42■■□□□ 1.18
SIRPB1-212ENST00000566055 ADRA2BP18089 450 aa22.41■■□□□ 1.18
SIRPB1-212ENST00000566055 PPP6R1Q9UPN7 881 aa22.41■■□□□ 1.18
SIRPB1-212ENST00000566055 SMARCA2P51531 1590 aa22.3■■□□□ 1.16
SIRPB1-212ENST00000566055 HMGXB3Q12766 1538 aa22.28■■□□□ 1.16
SIRPB1-212ENST00000566055 SMARCA4P51532 1647 aa22.27■■□□□ 1.16
SIRPB1-212ENST00000566055 BAZ1BQ9UIG0 1483 aaKnown RBP22.2■■□□□ 1.14
SIRPB1-212ENST00000566055 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
SIRPB1-212ENST00000566055 THOC2Q8NI27 1593 aaKnown RBP22.14■■□□□ 1.13
SIRPB1-212ENST00000566055 BAZ1AQ9NRL2 1556 aaPredicted RBP22.09■■□□□ 1.13
SIRPB1-212ENST00000566055 LAMC3Q9Y6N6 1575 aa22.06■■□□□ 1.12
SIRPB1-212ENST00000566055 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.12
SIRPB1-212ENST00000566055 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.12
SIRPB1-212ENST00000566055 KIF21AQ7Z4S6 1674 aa22■■□□□ 1.11
SIRPB1-212ENST00000566055 MROH2BQ7Z745 1585 aa21.99■■□□□ 1.11
SIRPB1-212ENST00000566055 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
SIRPB1-212ENST00000566055 CADPSQ9ULU8 1353 aa21.9■■□□□ 1.1
SIRPB1-212ENST00000566055 MRC2Q9UBG0 1479 aa21.83■■□□□ 1.09
SIRPB1-212ENST00000566055 WDR62O43379 1518 aa21.76■■□□□ 1.07
SIRPB1-212ENST00000566055 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
SIRPB1-212ENST00000566055 WIZO95785 1651 aa21.68■■□□□ 1.06
SIRPB1-212ENST00000566055 CEP164Q9UPV0 1460 aa21.66■■□□□ 1.06
SIRPB1-212ENST00000566055 FANCD2Q9BXW9 1451 aa21.64■■□□□ 1.05
SIRPB1-212ENST00000566055 PIAS4Q8N2W9 510 aaPredicted RBP21.62■■□□□ 1.05
SIRPB1-212ENST00000566055 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
SIRPB1-212ENST00000566055 CFTRP13569 1480 aa21.53■■□□□ 1.04
SIRPB1-212ENST00000566055 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
SIRPB1-212ENST00000566055 KCNA4P22459 653 aa21.37■■□□□ 1.01
SIRPB1-212ENST00000566055 RIMBP3CA6NJZ7 1639 aa21.36■■□□□ 1.01
SIRPB1-212ENST00000566055 RIMBP3BA6NNM3 1639 aa21.36■■□□□ 1.01
SIRPB1-212ENST00000566055 RIMBP3Q9UFD9 1639 aa21.36■■□□□ 1.01
SIRPB1-212ENST00000566055 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
SIRPB1-212ENST00000566055 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
SIRPB1-212ENST00000566055 CYB5RLQ6IPT4 315 aa21.28■■□□□ 1
SIRPB1-212ENST00000566055 ARHGEF11O15085 1522 aa21.27■■□□□ 1
SIRPB1-212ENST00000566055 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
SIRPB1-212ENST00000566055 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
SIRPB1-212ENST00000566055 TRHP20396 242 aaPredicted RBP21.17■□□□□ 0.98
SIRPB1-212ENST00000566055 TOPBP1Q92547 1522 aa21.17■□□□□ 0.98
SIRPB1-212ENST00000566055 PPP4R3CPQ6ZMV5 832 aa21.14■□□□□ 0.97
SIRPB1-212ENST00000566055 FBLN2P98095 1184 aa21.12■□□□□ 0.97
SIRPB1-212ENST00000566055 AQRO60306 1485 aaKnown RBP eCLIP21.12■□□□□ 0.97
SIRPB1-212ENST00000566055 PRDM2Q13029 1718 aa21.11■□□□□ 0.97
SIRPB1-212ENST00000566055 EIF4G3O43432 1585 aaKnown RBP21.08■□□□□ 0.97
SIRPB1-212ENST00000566055 ARAP1Q96P48 1450 aa21.05■□□□□ 0.96
SIRPB1-212ENST00000566055 ABCC8Q09428 1581 aa21.03■□□□□ 0.96
SIRPB1-212ENST00000566055 CHD1O14646 1710 aa21.01■□□□□ 0.95
SIRPB1-212ENST00000566055 DNMBPQ6XZF7 1577 aa21■□□□□ 0.95
SIRPB1-212ENST00000566055 TARBP1Q13395 1621 aaKnown RBP20.97■□□□□ 0.95
SIRPB1-212ENST00000566055 TDRD9Q8NDG6 1382 aaKnown RBP20.94■□□□□ 0.94
SIRPB1-212ENST00000566055 POLA1P09884 1462 aaPredicted RBP20.93■□□□□ 0.94
SIRPB1-212ENST00000566055 RAD54L2Q9Y4B4 1467 aa20.93■□□□□ 0.94
SIRPB1-212ENST00000566055 SOGA1O94964 1423 aa20.87■□□□□ 0.93
SIRPB1-212ENST00000566055 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
SIRPB1-212ENST00000566055 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
SIRPB1-212ENST00000566055 NCBP3Q53F19 620 aaKnown RBP20.79■□□□□ 0.92
SIRPB1-212ENST00000566055 MSH5O43196 834 aa20.77■□□□□ 0.92
SIRPB1-212ENST00000566055 CLASP1Q7Z460 1538 aa20.77■□□□□ 0.92
SIRPB1-212ENST00000566055 FGD5Q6ZNL6 1462 aa20.75■□□□□ 0.91
SIRPB1-212ENST00000566055 SYNJ1O43426 1573 aa20.7■□□□□ 0.9
SIRPB1-212ENST00000566055 MAGI1Q96QZ7 1491 aaPredicted RBP20.69■□□□□ 0.9
SIRPB1-212ENST00000566055 GRIN2BQ13224 1484 aa20.69■□□□□ 0.9
SIRPB1-212ENST00000566055 SYNJ2O15056 1496 aa20.66■□□□□ 0.9
SIRPB1-212ENST00000566055 CUX1P39880 1505 aa20.66■□□□□ 0.9
SIRPB1-212ENST00000566055 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
SIRPB1-212ENST00000566055 WDR97A6NE52 1622 aa20.61■□□□□ 0.89
SIRPB1-212ENST00000566055 EHMT2Q96KQ7 1210 aa20.58■□□□□ 0.89
SIRPB1-212ENST00000566055 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
SIRPB1-212ENST00000566055 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
SIRPB1-212ENST00000566055 PBRM1Q86U86 1689 aa20.48■□□□□ 0.87
SIRPB1-212ENST00000566055 NPM3O75607 178 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms