RNA–Protein interactions for RNA: ENST00000566052.1

IFT140-207, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 544 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-207ENST00000566052 NISCHQ9Y2I1 1504 aa37.36■■■■□ 3.57
IFT140-207ENST00000566052 CCDC180Q9P1Z9 1646 aa33.57■■■□□ 2.97
IFT140-207ENST00000566052 ABCC9O60706 1549 aa33.43■■■□□ 2.94
IFT140-207ENST00000566052 RB1CC1Q8TDY2 1594 aa31.91■■■□□ 2.7
IFT140-207ENST00000566052 NACADO15069 1562 aa31.71■■■□□ 2.67
IFT140-207ENST00000566052 DNAJC5BQ9UF47 199 aa31.39■■■□□ 2.62
IFT140-207ENST00000566052 DCAF8L2P0C7V8 631 aa31.38■■■□□ 2.61
IFT140-207ENST00000566052 MYO15BQ96JP2 1530 aa31.33■■■□□ 2.61
IFT140-207ENST00000566052 UNC13AQ9UPW8 1703 aa31.23■■■□□ 2.59
IFT140-207ENST00000566052 PABPN1Q86U42 306 aaKnown RBP eCLIP31.1■■■□□ 2.57
IFT140-207ENST00000566052 BICRAQ9NZM4 1560 aa31■■■□□ 2.55
IFT140-207ENST00000566052 ZCCHC6Q5VYS8 1495 aaKnown RBP30.95■■■□□ 2.55
IFT140-207ENST00000566052 DCAF1Q9Y4B6 1507 aa30.92■■■□□ 2.54
IFT140-207ENST00000566052 SHROOM4Q9ULL8 1493 aa30.63■■■□□ 2.49
IFT140-207ENST00000566052 SCRIBQ14160 1630 aa30.48■■■□□ 2.47
IFT140-207ENST00000566052 CC2D2AQ9P2K1 1620 aa30.27■■■□□ 2.44
IFT140-207ENST00000566052 EIF4G1Q04637 1599 aaKnown RBP30.21■■■□□ 2.43
IFT140-207ENST00000566052 CECR2Q9BXF3 1484 aa30.15■■■□□ 2.42
IFT140-207ENST00000566052 NCAPD3P42695 1498 aa29.28■■■□□ 2.28
IFT140-207ENST00000566052 ATAD2BQ9ULI0 1458 aa29.15■■■□□ 2.26
IFT140-207ENST00000566052 SMARCA4P51532 1647 aa29.14■■■□□ 2.26
IFT140-207ENST00000566052 SMARCA2P51531 1590 aa29.09■■■□□ 2.25
IFT140-207ENST00000566052 HMGXB3Q12766 1538 aa29.06■■■□□ 2.24
IFT140-207ENST00000566052 BAZ1AQ9NRL2 1556 aaPredicted RBP29■■■□□ 2.23
IFT140-207ENST00000566052 PEG3Q9GZU2 1588 aa28.91■■■□□ 2.22
IFT140-207ENST00000566052 CUX2O14529 1486 aa28.89■■■□□ 2.22
IFT140-207ENST00000566052 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
IFT140-207ENST00000566052 DNAJC5Q9H3Z4 198 aa28.86■■■□□ 2.21
IFT140-207ENST00000566052 BAZ1BQ9UIG0 1483 aaKnown RBP28.85■■■□□ 2.21
IFT140-207ENST00000566052 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
IFT140-207ENST00000566052 NESP48681 1621 aa28.74■■■□□ 2.19
IFT140-207ENST00000566052 LAMC3Q9Y6N6 1575 aa28.61■■■□□ 2.17
IFT140-207ENST00000566052 THOC2Q8NI27 1593 aaKnown RBP28.51■■■□□ 2.15
IFT140-207ENST00000566052 KIF21AQ7Z4S6 1674 aa28.42■■■□□ 2.14
IFT140-207ENST00000566052 PDS5BQ9NTI5 1447 aa28.42■■■□□ 2.14
IFT140-207ENST00000566052 WIZO95785 1651 aa28.42■■■□□ 2.14
IFT140-207ENST00000566052 CADPSQ9ULU8 1353 aa28.35■■■□□ 2.13
IFT140-207ENST00000566052 MRC2Q9UBG0 1479 aa28.16■■■□□ 2.1
IFT140-207ENST00000566052 RSF1Q96T23 1441 aaPredicted RBP28.16■■■□□ 2.1
IFT140-207ENST00000566052 WDR62O43379 1518 aa28.13■■■□□ 2.09
IFT140-207ENST00000566052 TOP2AP11388 1531 aaKnown RBP28.07■■■□□ 2.08
IFT140-207ENST00000566052 CFTRP13569 1480 aa28.05■■■□□ 2.08
IFT140-207ENST00000566052 CEP164Q9UPV0 1460 aa28.04■■■□□ 2.08
IFT140-207ENST00000566052 FANCD2Q9BXW9 1451 aa28.01■■■□□ 2.07
IFT140-207ENST00000566052 PRDM2Q13029 1718 aa27.83■■■□□ 2.05
IFT140-207ENST00000566052 URB2Q14146 1524 aaKnown RBP27.79■■■□□ 2.04
IFT140-207ENST00000566052 CCDC88BA6NC98 1476 aa27.74■■■□□ 2.03
IFT140-207ENST00000566052 OSCARQ8IYS5 282 aa27.53■■■□□ 2
IFT140-207ENST00000566052 IFT140Q96RY7 1462 aa27.5■■□□□ 1.99
IFT140-207ENST00000566052 TOPBP1Q92547 1522 aa27.49■■□□□ 1.99
IFT140-207ENST00000566052 ABCC8Q09428 1581 aa27.48■■□□□ 1.99
IFT140-207ENST00000566052 TRIM41Q8WV44 630 aa27.47■■□□□ 1.99
IFT140-207ENST00000566052 ZNF608Q9ULD9 1512 aaPredicted RBP27.42■■□□□ 1.98
IFT140-207ENST00000566052 DNMBPQ6XZF7 1577 aa27.41■■□□□ 1.98
IFT140-207ENST00000566052 EIF4G3O43432 1585 aaKnown RBP27.3■■□□□ 1.96
IFT140-207ENST00000566052 TARBP1Q13395 1621 aaKnown RBP27.29■■□□□ 1.96
IFT140-207ENST00000566052 POLA1P09884 1462 aaPredicted RBP27.21■■□□□ 1.95
IFT140-207ENST00000566052 RIMBP3CA6NJZ7 1639 aa27.19■■□□□ 1.94
IFT140-207ENST00000566052 RIMBP3BA6NNM3 1639 aa27.19■■□□□ 1.94
IFT140-207ENST00000566052 RIMBP3Q9UFD9 1639 aa27.19■■□□□ 1.94
IFT140-207ENST00000566052 AQRO60306 1485 aaKnown RBP eCLIP27.18■■□□□ 1.94
IFT140-207ENST00000566052 CHD1O14646 1710 aa27.11■■□□□ 1.93
IFT140-207ENST00000566052 ARHGEF11O15085 1522 aa27.11■■□□□ 1.93
IFT140-207ENST00000566052 RAD54L2Q9Y4B4 1467 aa27.08■■□□□ 1.93
IFT140-207ENST00000566052 SOGA1O94964 1423 aa27.07■■□□□ 1.92
IFT140-207ENST00000566052 WDR97A6NE52 1622 aa27.05■■□□□ 1.92
IFT140-207ENST00000566052 FGD5Q6ZNL6 1462 aa27.03■■□□□ 1.92
IFT140-207ENST00000566052 CUX1P39880 1505 aa27.02■■□□□ 1.92
IFT140-207ENST00000566052 TDRD9Q8NDG6 1382 aaKnown RBP26.99■■□□□ 1.91
IFT140-207ENST00000566052 FBLN2P98095 1184 aa26.93■■□□□ 1.9
IFT140-207ENST00000566052 SNAPC4Q5SXM2 1469 aa26.89■■□□□ 1.9
IFT140-207ENST00000566052 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
IFT140-207ENST00000566052 CYB5RLQ6IPT4 315 aa26.85■■□□□ 1.89
IFT140-207ENST00000566052 GRIN2BQ13224 1484 aa26.85■■□□□ 1.89
IFT140-207ENST00000566052 ARAP1Q96P48 1450 aa26.82■■□□□ 1.88
IFT140-207ENST00000566052 CLASP1Q7Z460 1538 aa26.81■■□□□ 1.88
IFT140-207ENST00000566052 SUPT5HO00267 1087 aaKnown RBP26.81■■□□□ 1.88
IFT140-207ENST00000566052 CHMP7Q8WUX9 453 aaPredicted RBP26.78■■□□□ 1.88
IFT140-207ENST00000566052 PBRM1Q86U86 1689 aa26.77■■□□□ 1.88
IFT140-207ENST00000566052 SYNJ1O43426 1573 aa26.77■■□□□ 1.88
IFT140-207ENST00000566052 SYNJ2O15056 1496 aa26.77■■□□□ 1.88
IFT140-207ENST00000566052 ABCA10Q8WWZ4 1543 aa26.75■■□□□ 1.87
IFT140-207ENST00000566052 GAPVD1Q14C86 1478 aa26.75■■□□□ 1.87
IFT140-207ENST00000566052 ABCA5Q8WWZ7 1642 aa26.73■■□□□ 1.87
IFT140-207ENST00000566052 BIVM-ERCC5R4GMW8 1640 aa26.63■■□□□ 1.85
IFT140-207ENST00000566052 WRNQ14191 1432 aaPredicted RBP eCLIP26.62■■□□□ 1.85
IFT140-207ENST00000566052 TOP2BQ02880 1626 aa26.61■■□□□ 1.85
IFT140-207ENST00000566052 GRIN2AQ12879 1464 aa26.51■■□□□ 1.83
IFT140-207ENST00000566052 TRHP20396 242 aaPredicted RBP26.51■■□□□ 1.83
IFT140-207ENST00000566052 ADAMTS12P58397 1594 aa26.5■■□□□ 1.83
IFT140-207ENST00000566052 NUP160Q12769 1436 aa26.44■■□□□ 1.82
IFT140-207ENST00000566052 ERICH3Q5RHP9 1530 aa26.43■■□□□ 1.82
IFT140-207ENST00000566052 CEP170Q5SW79 1584 aa26.41■■□□□ 1.82
IFT140-207ENST00000566052 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
IFT140-207ENST00000566052 SHROOM2Q13796 1616 aa26.36■■□□□ 1.81
IFT140-207ENST00000566052 ERCC6L2Q5T890 1561 aa26.35■■□□□ 1.81
IFT140-207ENST00000566052 PRG4Q92954 1404 aaPredicted RBP26.14■■□□□ 1.78
IFT140-207ENST00000566052 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.77
IFT140-207ENST00000566052 JPH4Q96JJ6 628 aa26.13■■□□□ 1.77
IFT140-207ENST00000566052 IGF1RP08069 1367 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms