RNA–Protein interactions for RNA: ENST00000566050.5

MTHFSD-213, Transcript of methenyltetrahydrofolate synthetase domain containing, humanhuman

TSL 1 (best)

Gene MTHFSD, Length 1,270 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFSD-213ENST00000566050 NISCHQ9Y2I1 1504 aa34.47■■■■□ 3.11
MTHFSD-213ENST00000566050 CCDC180Q9P1Z9 1646 aa30.75■■■□□ 2.51
MTHFSD-213ENST00000566050 ABCC9O60706 1549 aa30.21■■■□□ 2.43
MTHFSD-213ENST00000566050 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.24
MTHFSD-213ENST00000566050 NACADO15069 1562 aa28.95■■■□□ 2.22
MTHFSD-213ENST00000566050 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
MTHFSD-213ENST00000566050 ZCCHC6Q5VYS8 1495 aaKnown RBP28.72■■■□□ 2.19
MTHFSD-213ENST00000566050 DCAF8L2P0C7V8 631 aa28.68■■■□□ 2.18
MTHFSD-213ENST00000566050 DCAF1Q9Y4B6 1507 aa28.58■■■□□ 2.17
MTHFSD-213ENST00000566050 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
MTHFSD-213ENST00000566050 BICRAQ9NZM4 1560 aa28.17■■■□□ 2.1
MTHFSD-213ENST00000566050 PABPN1Q86U42 306 aaKnown RBP eCLIP28.15■■■□□ 2.1
MTHFSD-213ENST00000566050 SCRIBQ14160 1630 aa27.98■■■□□ 2.07
MTHFSD-213ENST00000566050 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.06
MTHFSD-213ENST00000566050 DNAJC5BQ9UF47 199 aa27.91■■■□□ 2.06
MTHFSD-213ENST00000566050 EIF4G1Q04637 1599 aaKnown RBP27.43■■□□□ 1.98
MTHFSD-213ENST00000566050 CC2D2AQ9P2K1 1620 aa27.34■■□□□ 1.97
MTHFSD-213ENST00000566050 CECR2Q9BXF3 1484 aa27.2■■□□□ 1.95
MTHFSD-213ENST00000566050 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
MTHFSD-213ENST00000566050 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
MTHFSD-213ENST00000566050 BAZ1AQ9NRL2 1556 aaPredicted RBP26.73■■□□□ 1.87
MTHFSD-213ENST00000566050 ATAD2BQ9ULI0 1458 aa26.69■■□□□ 1.86
MTHFSD-213ENST00000566050 SMARCA2P51531 1590 aa26.66■■□□□ 1.86
MTHFSD-213ENST00000566050 HMGXB3Q12766 1538 aa26.6■■□□□ 1.85
MTHFSD-213ENST00000566050 PEG3Q9GZU2 1588 aa26.58■■□□□ 1.85
MTHFSD-213ENST00000566050 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
MTHFSD-213ENST00000566050 BAZ1BQ9UIG0 1483 aaKnown RBP26.44■■□□□ 1.82
MTHFSD-213ENST00000566050 WIZO95785 1651 aa26.21■■□□□ 1.79
MTHFSD-213ENST00000566050 RSF1Q96T23 1441 aaPredicted RBP26.19■■□□□ 1.78
MTHFSD-213ENST00000566050 NESP48681 1621 aa26.1■■□□□ 1.77
MTHFSD-213ENST00000566050 ERCC6Q03468 1493 aa26.05■■□□□ 1.76
MTHFSD-213ENST00000566050 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
MTHFSD-213ENST00000566050 TOP2AP11388 1531 aaKnown RBP25.99■■□□□ 1.75
MTHFSD-213ENST00000566050 CUX2O14529 1486 aa25.92■■□□□ 1.74
MTHFSD-213ENST00000566050 CADPSQ9ULU8 1353 aa25.91■■□□□ 1.74
MTHFSD-213ENST00000566050 PDS5BQ9NTI5 1447 aa25.85■■□□□ 1.73
MTHFSD-213ENST00000566050 THOC2Q8NI27 1593 aaKnown RBP25.8■■□□□ 1.72
MTHFSD-213ENST00000566050 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
MTHFSD-213ENST00000566050 CFTRP13569 1480 aa25.75■■□□□ 1.71
MTHFSD-213ENST00000566050 CCDC88BA6NC98 1476 aa25.64■■□□□ 1.69
MTHFSD-213ENST00000566050 MRC2Q9UBG0 1479 aa25.62■■□□□ 1.69
MTHFSD-213ENST00000566050 FANCD2Q9BXW9 1451 aa25.61■■□□□ 1.69
MTHFSD-213ENST00000566050 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
MTHFSD-213ENST00000566050 WDR62O43379 1518 aa25.57■■□□□ 1.68
MTHFSD-213ENST00000566050 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
MTHFSD-213ENST00000566050 URB2Q14146 1524 aaKnown RBP25.38■■□□□ 1.65
MTHFSD-213ENST00000566050 DNAJC5Q9H3Z4 198 aa25.31■■□□□ 1.64
MTHFSD-213ENST00000566050 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
MTHFSD-213ENST00000566050 TOPBP1Q92547 1522 aa25.18■■□□□ 1.62
MTHFSD-213ENST00000566050 ABCC8Q09428 1581 aa25.17■■□□□ 1.62
MTHFSD-213ENST00000566050 DNMBPQ6XZF7 1577 aa25.14■■□□□ 1.62
MTHFSD-213ENST00000566050 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
MTHFSD-213ENST00000566050 ZNF608Q9ULD9 1512 aaPredicted RBP24.97■■□□□ 1.59
MTHFSD-213ENST00000566050 POLA1P09884 1462 aaPredicted RBP24.97■■□□□ 1.59
MTHFSD-213ENST00000566050 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
MTHFSD-213ENST00000566050 CUX1P39880 1505 aa24.92■■□□□ 1.58
MTHFSD-213ENST00000566050 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
MTHFSD-213ENST00000566050 FGD5Q6ZNL6 1462 aa24.86■■□□□ 1.57
MTHFSD-213ENST00000566050 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.56
MTHFSD-213ENST00000566050 SOGA1O94964 1423 aa24.81■■□□□ 1.56
MTHFSD-213ENST00000566050 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.56
MTHFSD-213ENST00000566050 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
MTHFSD-213ENST00000566050 OSCARQ8IYS5 282 aa24.72■■□□□ 1.55
MTHFSD-213ENST00000566050 TDRD9Q8NDG6 1382 aaKnown RBP24.69■■□□□ 1.54
MTHFSD-213ENST00000566050 WRNQ14191 1432 aaPredicted RBP eCLIP24.68■■□□□ 1.54
MTHFSD-213ENST00000566050 TOP2BQ02880 1626 aa24.66■■□□□ 1.54
MTHFSD-213ENST00000566050 BIVM-ERCC5R4GMW8 1640 aa24.66■■□□□ 1.54
MTHFSD-213ENST00000566050 ABCA10Q8WWZ4 1543 aa24.64■■□□□ 1.53
MTHFSD-213ENST00000566050 SYNJ1O43426 1573 aa24.63■■□□□ 1.53
MTHFSD-213ENST00000566050 GRIN2BQ13224 1484 aa24.58■■□□□ 1.53
MTHFSD-213ENST00000566050 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.52
MTHFSD-213ENST00000566050 ABCA5Q8WWZ7 1642 aa24.57■■□□□ 1.52
MTHFSD-213ENST00000566050 MAGI1Q96QZ7 1491 aaPredicted RBP24.56■■□□□ 1.52
MTHFSD-213ENST00000566050 CHD1O14646 1710 aa24.55■■□□□ 1.52
MTHFSD-213ENST00000566050 GAPVD1Q14C86 1478 aa24.54■■□□□ 1.52
MTHFSD-213ENST00000566050 PBRM1Q86U86 1689 aa24.48■■□□□ 1.51
MTHFSD-213ENST00000566050 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
MTHFSD-213ENST00000566050 FBLN2P98095 1184 aa24.43■■□□□ 1.5
MTHFSD-213ENST00000566050 ARHGEF11O15085 1522 aa24.39■■□□□ 1.49
MTHFSD-213ENST00000566050 RIMBP3CA6NJZ7 1639 aa24.39■■□□□ 1.49
MTHFSD-213ENST00000566050 RIMBP3BA6NNM3 1639 aa24.39■■□□□ 1.49
MTHFSD-213ENST00000566050 RIMBP3Q9UFD9 1639 aa24.39■■□□□ 1.49
MTHFSD-213ENST00000566050 CHMP7Q8WUX9 453 aaPredicted RBP24.38■■□□□ 1.49
MTHFSD-213ENST00000566050 CLASP1Q7Z460 1538 aa24.37■■□□□ 1.49
MTHFSD-213ENST00000566050 ADAMTS12P58397 1594 aa24.34■■□□□ 1.49
MTHFSD-213ENST00000566050 ERICH3Q5RHP9 1530 aa24.34■■□□□ 1.49
MTHFSD-213ENST00000566050 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
MTHFSD-213ENST00000566050 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
MTHFSD-213ENST00000566050 GRIN2AQ12879 1464 aa24.27■■□□□ 1.48
MTHFSD-213ENST00000566050 NUP160Q12769 1436 aa24.2■■□□□ 1.46
MTHFSD-213ENST00000566050 ARAP1Q96P48 1450 aa24.19■■□□□ 1.46
MTHFSD-213ENST00000566050 KIF27Q86VH2 1401 aa24.17■■□□□ 1.46
MTHFSD-213ENST00000566050 CEP170Q5SW79 1584 aa24.16■■□□□ 1.46
MTHFSD-213ENST00000566050 IGF1RP08069 1367 aa24.1■■□□□ 1.45
MTHFSD-213ENST00000566050 CYB5RLQ6IPT4 315 aa24.07■■□□□ 1.44
MTHFSD-213ENST00000566050 CUL7Q14999 1698 aa24.05■■□□□ 1.44
MTHFSD-213ENST00000566050 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
MTHFSD-213ENST00000566050 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
MTHFSD-213ENST00000566050 ERCC6L2Q5T890 1561 aa23.96■■□□□ 1.43
MTHFSD-213ENST00000566050 CARMIL1Q5VZK9 1371 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms