RNA–Protein interactions for RNA: ENST00000566015.1

PSMD7-203, Transcript of proteasome 26S subunit, non-ATPase 7, humanhuman

TSL 2

Gene PSMD7, Length 537 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD7-203ENST00000566015 NISCHQ9Y2I1 1504 aa46.84■■■■■ 5.09
PSMD7-203ENST00000566015 CCDC180Q9P1Z9 1646 aa41.87■■■■■ 4.29
PSMD7-203ENST00000566015 ABCC9O60706 1549 aa41.51■■■■■ 4.24
PSMD7-203ENST00000566015 RB1CC1Q8TDY2 1594 aa39.67■■■■□ 3.94
PSMD7-203ENST00000566015 NACADO15069 1562 aa39.5■■■■□ 3.91
PSMD7-203ENST00000566015 DCAF8L2P0C7V8 631 aa39.31■■■■□ 3.88
PSMD7-203ENST00000566015 MYO15BQ96JP2 1530 aa39.09■■■■□ 3.85
PSMD7-203ENST00000566015 ZCCHC6Q5VYS8 1495 aaKnown RBP38.9■■■■□ 3.82
PSMD7-203ENST00000566015 UNC13AQ9UPW8 1703 aa38.82■■■■□ 3.8
PSMD7-203ENST00000566015 DCAF1Q9Y4B6 1507 aa38.72■■■■□ 3.79
PSMD7-203ENST00000566015 PABPN1Q86U42 306 aaKnown RBP eCLIP38.69■■■■□ 3.78
PSMD7-203ENST00000566015 DNAJC5BQ9UF47 199 aa38.65■■■■□ 3.78
PSMD7-203ENST00000566015 BICRAQ9NZM4 1560 aa38.54■■■■□ 3.76
PSMD7-203ENST00000566015 SCRIBQ14160 1630 aa38.16■■■■□ 3.7
PSMD7-203ENST00000566015 SHROOM4Q9ULL8 1493 aa38.03■■■■□ 3.68
PSMD7-203ENST00000566015 EIF4G1Q04637 1599 aaKnown RBP37.54■■■■□ 3.6
PSMD7-203ENST00000566015 CC2D2AQ9P2K1 1620 aa37.53■■■■□ 3.6
PSMD7-203ENST00000566015 CECR2Q9BXF3 1484 aa37.35■■■■□ 3.57
PSMD7-203ENST00000566015 SMARCA4P51532 1647 aa36.46■■■■□ 3.43
PSMD7-203ENST00000566015 NCAPD3P42695 1498 aa36.46■■■■□ 3.43
PSMD7-203ENST00000566015 ATAD2BQ9ULI0 1458 aa36.41■■■■□ 3.42
PSMD7-203ENST00000566015 BAZ1AQ9NRL2 1556 aaPredicted RBP36.32■■■■□ 3.4
PSMD7-203ENST00000566015 SMARCA2P51531 1590 aa36.31■■■■□ 3.4
PSMD7-203ENST00000566015 HMGXB3Q12766 1538 aa36.23■■■■□ 3.39
PSMD7-203ENST00000566015 PEG3Q9GZU2 1588 aa36.12■■■■□ 3.37
PSMD7-203ENST00000566015 MROH2BQ7Z745 1585 aa36.1■■■■□ 3.37
PSMD7-203ENST00000566015 BAZ1BQ9UIG0 1483 aaKnown RBP36.05■■■■□ 3.36
PSMD7-203ENST00000566015 ERCC6Q03468 1493 aa35.79■■■■□ 3.32
PSMD7-203ENST00000566015 NESP48681 1621 aa35.78■■■■□ 3.32
PSMD7-203ENST00000566015 WIZO95785 1651 aa35.68■■■■□ 3.3
PSMD7-203ENST00000566015 CUX2O14529 1486 aa35.62■■■■□ 3.29
PSMD7-203ENST00000566015 LAMC3Q9Y6N6 1575 aa35.58■■■■□ 3.29
PSMD7-203ENST00000566015 RSF1Q96T23 1441 aaPredicted RBP35.48■■■■□ 3.27
PSMD7-203ENST00000566015 CADPSQ9ULU8 1353 aa35.37■■■■□ 3.25
PSMD7-203ENST00000566015 THOC2Q8NI27 1593 aaKnown RBP35.35■■■■□ 3.25
PSMD7-203ENST00000566015 PDS5BQ9NTI5 1447 aa35.34■■■■□ 3.25
PSMD7-203ENST00000566015 KIF21AQ7Z4S6 1674 aa35.33■■■■□ 3.25
PSMD7-203ENST00000566015 TOP2AP11388 1531 aaKnown RBP35.25■■■■□ 3.23
PSMD7-203ENST00000566015 DNAJC5Q9H3Z4 198 aa35.2■■■■□ 3.23
PSMD7-203ENST00000566015 CFTRP13569 1480 aa35.04■■■■□ 3.2
PSMD7-203ENST00000566015 MRC2Q9UBG0 1479 aa35.03■■■■□ 3.2
PSMD7-203ENST00000566015 FANCD2Q9BXW9 1451 aa34.96■■■■□ 3.19
PSMD7-203ENST00000566015 CEP164Q9UPV0 1460 aa34.95■■■■□ 3.19
PSMD7-203ENST00000566015 WDR62O43379 1518 aa34.95■■■■□ 3.19
PSMD7-203ENST00000566015 CCDC88BA6NC98 1476 aa34.85■■■■□ 3.17
PSMD7-203ENST00000566015 PRDM2Q13029 1718 aa34.74■■■■□ 3.15
PSMD7-203ENST00000566015 URB2Q14146 1524 aaKnown RBP34.66■■■■□ 3.14
PSMD7-203ENST00000566015 TOPBP1Q92547 1522 aa34.35■■■■□ 3.09
PSMD7-203ENST00000566015 ABCC8Q09428 1581 aa34.28■■■■□ 3.08
PSMD7-203ENST00000566015 DNMBPQ6XZF7 1577 aa34.25■■■■□ 3.07
PSMD7-203ENST00000566015 IFT140Q96RY7 1462 aa34.25■■■■□ 3.07
PSMD7-203ENST00000566015 ZNF608Q9ULD9 1512 aaPredicted RBP34.17■■■■□ 3.06
PSMD7-203ENST00000566015 SUPT5HO00267 1087 aaKnown RBP34.13■■■■□ 3.05
PSMD7-203ENST00000566015 OSCARQ8IYS5 282 aa34.04■■■■□ 3.04
PSMD7-203ENST00000566015 TARBP1Q13395 1621 aaKnown RBP34.03■■■■□ 3.04
PSMD7-203ENST00000566015 POLA1P09884 1462 aaPredicted RBP34.01■■■■□ 3.04
PSMD7-203ENST00000566015 EIF4G3O43432 1585 aaKnown RBP34■■■■□ 3.03
PSMD7-203ENST00000566015 AQRO60306 1485 aaKnown RBP eCLIP33.9■■■■□ 3.029e-7■■■■■ 31.1
PSMD7-203ENST00000566015 CUX1P39880 1505 aa33.89■■■■□ 3.02
PSMD7-203ENST00000566015 RAD54L2Q9Y4B4 1467 aa33.88■■■■□ 3.01
PSMD7-203ENST00000566015 SOGA1O94964 1423 aa33.86■■■■□ 3.01
PSMD7-203ENST00000566015 FGD5Q6ZNL6 1462 aa33.85■■■■□ 3.01
PSMD7-203ENST00000566015 TRIM41Q8WV44 630 aa33.77■■■■□ 3
PSMD7-203ENST00000566015 TDRD9Q8NDG6 1382 aaKnown RBP33.74■■■□□ 2.99
PSMD7-203ENST00000566015 WDR97A6NE52 1622 aa33.69■■■□□ 2.98
PSMD7-203ENST00000566015 CHD1O14646 1710 aa33.69■■■□□ 2.98
PSMD7-203ENST00000566015 RIMBP3CA6NJZ7 1639 aa33.59■■■□□ 2.97
PSMD7-203ENST00000566015 RIMBP3BA6NNM3 1639 aa33.59■■■□□ 2.97
PSMD7-203ENST00000566015 RIMBP3Q9UFD9 1639 aa33.59■■■□□ 2.97
PSMD7-203ENST00000566015 SNAPC4Q5SXM2 1469 aa33.56■■■□□ 2.96
PSMD7-203ENST00000566015 FBLN2P98095 1184 aa33.56■■■□□ 2.96
PSMD7-203ENST00000566015 GRIN2BQ13224 1484 aa33.52■■■□□ 2.96
PSMD7-203ENST00000566015 ARHGEF11O15085 1522 aa33.52■■■□□ 2.96
PSMD7-203ENST00000566015 ABCA10Q8WWZ4 1543 aa33.49■■■□□ 2.95
PSMD7-203ENST00000566015 MAGI1Q96QZ7 1491 aaPredicted RBP33.49■■■□□ 2.95
PSMD7-203ENST00000566015 BIVM-ERCC5R4GMW8 1640 aa33.46■■■□□ 2.95
PSMD7-203ENST00000566015 GAPVD1Q14C86 1478 aa33.45■■■□□ 2.95
PSMD7-203ENST00000566015 WRNQ14191 1432 aaPredicted RBP eCLIP33.45■■■□□ 2.94
PSMD7-203ENST00000566015 TOP2BQ02880 1626 aa33.44■■■□□ 2.94
PSMD7-203ENST00000566015 PBRM1Q86U86 1689 aa33.44■■■□□ 2.94
PSMD7-203ENST00000566015 SYNJ1O43426 1573 aa33.43■■■□□ 2.94
PSMD7-203ENST00000566015 ABCA5Q8WWZ7 1642 aa33.42■■■□□ 2.94
PSMD7-203ENST00000566015 CHMP7Q8WUX9 453 aaPredicted RBP33.39■■■□□ 2.94
PSMD7-203ENST00000566015 SYNJ2O15056 1496 aa33.37■■■□□ 2.93
PSMD7-203ENST00000566015 CLASP1Q7Z460 1538 aa33.32■■■□□ 2.92
PSMD7-203ENST00000566015 CYB5RLQ6IPT4 315 aa33.22■■■□□ 2.91
PSMD7-203ENST00000566015 ARAP1Q96P48 1450 aa33.22■■■□□ 2.91
PSMD7-203ENST00000566015 ADAMTS12P58397 1594 aa33.13■■■□□ 2.89
PSMD7-203ENST00000566015 GRIN2AQ12879 1464 aa33.1■■■□□ 2.89
PSMD7-203ENST00000566015 ERICH3Q5RHP9 1530 aa33.08■■■□□ 2.89
PSMD7-203ENST00000566015 FHAD1B1AJZ9 1412 aa33.04■■■□□ 2.88
PSMD7-203ENST00000566015 NUP160Q12769 1436 aa32.99■■■□□ 2.87
PSMD7-203ENST00000566015 CEP170Q5SW79 1584 aa32.98■■■□□ 2.87
PSMD7-203ENST00000566015 ERCC6L2Q5T890 1561 aa32.83■■■□□ 2.85
PSMD7-203ENST00000566015 SHROOM2Q13796 1616 aa32.81■■■□□ 2.84
PSMD7-203ENST00000566015 KIF27Q86VH2 1401 aa32.77■■■□□ 2.84
PSMD7-203ENST00000566015 IGF1RP08069 1367 aa32.75■■■□□ 2.83
PSMD7-203ENST00000566015 TRHP20396 242 aaPredicted RBP32.71■■■□□ 2.83
PSMD7-203ENST00000566015 CUL7Q14999 1698 aa32.66■■■□□ 2.82
PSMD7-203ENST00000566015 RUSC2Q8N2Y8 1516 aa32.66■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms