RNA–Protein interactions for RNA: ENST00000565848.1

NR4A1-221, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 691 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-221ENST00000565848 NISCHQ9Y2I1 1504 aa29.56■■■□□ 2.32
NR4A1-221ENST00000565848 ABCC9O60706 1549 aa26.17■■□□□ 1.78
NR4A1-221ENST00000565848 CCDC180Q9P1Z9 1646 aa26.12■■□□□ 1.77
NR4A1-221ENST00000565848 AEBP2Q6ZN18 517 aaPredicted RBP25.22■■□□□ 1.63
NR4A1-221ENST00000565848 DNAJC5BQ9UF47 199 aa25.15■■□□□ 1.62
NR4A1-221ENST00000565848 ZCCHC6Q5VYS8 1495 aaKnown RBP24.76■■□□□ 1.55
NR4A1-221ENST00000565848 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
NR4A1-221ENST00000565848 DCAF1Q9Y4B6 1507 aa24.56■■□□□ 1.52
NR4A1-221ENST00000565848 MYO15BQ96JP2 1530 aa24.5■■□□□ 1.51
NR4A1-221ENST00000565848 RB1CC1Q8TDY2 1594 aa24.48■■□□□ 1.51
NR4A1-221ENST00000565848 DCAF8L2P0C7V8 631 aa24.46■■□□□ 1.51
NR4A1-221ENST00000565848 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
NR4A1-221ENST00000565848 NACADO15069 1562 aa24.39■■□□□ 1.5
NR4A1-221ENST00000565848 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
NR4A1-221ENST00000565848 BICRAQ9NZM4 1560 aa23.76■■□□□ 1.39
NR4A1-221ENST00000565848 SCRIBQ14160 1630 aa23.74■■□□□ 1.39
NR4A1-221ENST00000565848 CECR2Q9BXF3 1484 aa23.59■■□□□ 1.37
NR4A1-221ENST00000565848 CC2D2AQ9P2K1 1620 aa23.46■■□□□ 1.35
NR4A1-221ENST00000565848 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
NR4A1-221ENST00000565848 DNAJC5Q9H3Z4 198 aa23.44■■□□□ 1.34
NR4A1-221ENST00000565848 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
NR4A1-221ENST00000565848 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
NR4A1-221ENST00000565848 SMARCA4P51532 1647 aa22.84■■□□□ 1.25
NR4A1-221ENST00000565848 MROH2BQ7Z745 1585 aa22.78■■□□□ 1.24
NR4A1-221ENST00000565848 PEG3Q9GZU2 1588 aa22.69■■□□□ 1.22
NR4A1-221ENST00000565848 RSF1Q96T23 1441 aaPredicted RBP22.69■■□□□ 1.22
NR4A1-221ENST00000565848 ERCC6Q03468 1493 aa22.64■■□□□ 1.21
NR4A1-221ENST00000565848 CUX2O14529 1486 aa22.62■■□□□ 1.21
NR4A1-221ENST00000565848 ATAD2BQ9ULI0 1458 aa22.57■■□□□ 1.2
NR4A1-221ENST00000565848 WIZO95785 1651 aa22.55■■□□□ 1.2
NR4A1-221ENST00000565848 SMARCA2P51531 1590 aa22.55■■□□□ 1.2
NR4A1-221ENST00000565848 NCAPD3P42695 1498 aa22.51■■□□□ 1.19
NR4A1-221ENST00000565848 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
NR4A1-221ENST00000565848 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
NR4A1-221ENST00000565848 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
NR4A1-221ENST00000565848 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
NR4A1-221ENST00000565848 NESP48681 1621 aa22.29■■□□□ 1.16
NR4A1-221ENST00000565848 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
NR4A1-221ENST00000565848 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
NR4A1-221ENST00000565848 THOC2Q8NI27 1593 aaKnown RBP21.96■■□□□ 1.11
NR4A1-221ENST00000565848 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
NR4A1-221ENST00000565848 LAMC3Q9Y6N6 1575 aa21.88■■□□□ 1.09
NR4A1-221ENST00000565848 CFTRP13569 1480 aa21.84■■□□□ 1.09
NR4A1-221ENST00000565848 CADPSQ9ULU8 1353 aa21.82■■□□□ 1.08
NR4A1-221ENST00000565848 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
NR4A1-221ENST00000565848 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
NR4A1-221ENST00000565848 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
NR4A1-221ENST00000565848 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
NR4A1-221ENST00000565848 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
NR4A1-221ENST00000565848 WDR62O43379 1518 aa21.59■■□□□ 1.05
NR4A1-221ENST00000565848 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
NR4A1-221ENST00000565848 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
NR4A1-221ENST00000565848 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
NR4A1-221ENST00000565848 ABCC8Q09428 1581 aa21.39■■□□□ 1.01
NR4A1-221ENST00000565848 URB2Q14146 1524 aaKnown RBP21.36■■□□□ 1.01
NR4A1-221ENST00000565848 TRHP20396 242 aaPredicted RBP21.36■■□□□ 1.01
NR4A1-221ENST00000565848 CYB5RLQ6IPT4 315 aa21.36■■□□□ 1.01
NR4A1-221ENST00000565848 CUX1P39880 1505 aa21.34■■□□□ 1.01
NR4A1-221ENST00000565848 BIVM-ERCC5R4GMW8 1640 aa21.33■■□□□ 1.01
NR4A1-221ENST00000565848 DNMBPQ6XZF7 1577 aa21.33■■□□□ 1.01
NR4A1-221ENST00000565848 WRNQ14191 1432 aaPredicted RBP eCLIP21.33■■□□□ 1.01
NR4A1-221ENST00000565848 SYNJ1O43426 1573 aa21.31■■□□□ 1
NR4A1-221ENST00000565848 TOP2BQ02880 1626 aa21.31■■□□□ 1
NR4A1-221ENST00000565848 TOPBP1Q92547 1522 aa21.3■■□□□ 1
NR4A1-221ENST00000565848 RIMBP3CA6NJZ7 1639 aa21.29■■□□□ 1
NR4A1-221ENST00000565848 RIMBP3BA6NNM3 1639 aa21.29■■□□□ 1
NR4A1-221ENST00000565848 RIMBP3Q9UFD9 1639 aa21.29■■□□□ 1
NR4A1-221ENST00000565848 ARHGEF11O15085 1522 aa21.2■□□□□ 0.98
NR4A1-221ENST00000565848 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
NR4A1-221ENST00000565848 FBLN2P98095 1184 aa21.17■□□□□ 0.98
NR4A1-221ENST00000565848 POLA1P09884 1462 aaPredicted RBP21.15■□□□□ 0.98
NR4A1-221ENST00000565848 FGD5Q6ZNL6 1462 aa21.15■□□□□ 0.98
NR4A1-221ENST00000565848 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
NR4A1-221ENST00000565848 TARBP1Q13395 1621 aaKnown RBP21.09■□□□□ 0.97
NR4A1-221ENST00000565848 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
NR4A1-221ENST00000565848 ABCA10Q8WWZ4 1543 aa21.02■□□□□ 0.96
NR4A1-221ENST00000565848 SOGA1O94964 1423 aa21.02■□□□□ 0.96
NR4A1-221ENST00000565848 RAD54L2Q9Y4B4 1467 aa21.01■□□□□ 0.95
NR4A1-221ENST00000565848 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.95
NR4A1-221ENST00000565848 ARAP1Q96P48 1450 aa20.97■□□□□ 0.95
NR4A1-221ENST00000565848 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
NR4A1-221ENST00000565848 EIF4G3O43432 1585 aaKnown RBP20.9■□□□□ 0.94
NR4A1-221ENST00000565848 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
NR4A1-221ENST00000565848 TDRD9Q8NDG6 1382 aaKnown RBP20.84■□□□□ 0.93
NR4A1-221ENST00000565848 RUSC2Q8N2Y8 1516 aa20.83■□□□□ 0.93
NR4A1-221ENST00000565848 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
NR4A1-221ENST00000565848 CHD1O14646 1710 aa20.81■□□□□ 0.92
NR4A1-221ENST00000565848 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
NR4A1-221ENST00000565848 EEA1Q15075 1411 aa20.8■□□□□ 0.92
NR4A1-221ENST00000565848 PBRM1Q86U86 1689 aa20.79■□□□□ 0.92
NR4A1-221ENST00000565848 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
NR4A1-221ENST00000565848 GRIN2BQ13224 1484 aa20.74■□□□□ 0.91
NR4A1-221ENST00000565848 IGF1RP08069 1367 aa20.72■□□□□ 0.91
NR4A1-221ENST00000565848 SNAPC4Q5SXM2 1469 aa20.69■□□□□ 0.9
NR4A1-221ENST00000565848 CUL7Q14999 1698 aa20.68■□□□□ 0.9
NR4A1-221ENST00000565848 MAGI1Q96QZ7 1491 aaPredicted RBP20.66■□□□□ 0.9
NR4A1-221ENST00000565848 ADAMTS12P58397 1594 aa20.66■□□□□ 0.9
NR4A1-221ENST00000565848 PRXQ9BXM0 1461 aa20.64■□□□□ 0.89
NR4A1-221ENST00000565848 CSRNP3Q8WYN3 585 aa20.62■□□□□ 0.89
NR4A1-221ENST00000565848 KIF21BO75037 1637 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms