RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 NISCHQ9Y2I1 1504 aa36.05■■■■□ 3.36
KNOP1-203ENST00000565844 CCDC180Q9P1Z9 1646 aa32.09■■■□□ 2.73
KNOP1-203ENST00000565844 ABCC9O60706 1549 aa31.96■■■□□ 2.71
KNOP1-203ENST00000565844 RB1CC1Q8TDY2 1594 aa30.42■■■□□ 2.46
KNOP1-203ENST00000565844 DCAF8L2P0C7V8 631 aa30.28■■■□□ 2.44
KNOP1-203ENST00000565844 NACADO15069 1562 aa30.22■■■□□ 2.43
KNOP1-203ENST00000565844 ZCCHC6Q5VYS8 1495 aaKnown RBP30.15■■■□□ 2.42
KNOP1-203ENST00000565844 UNC13AQ9UPW8 1703 aa29.94■■■□□ 2.38
KNOP1-203ENST00000565844 DCAF1Q9Y4B6 1507 aa29.84■■■□□ 2.37
KNOP1-203ENST00000565844 PABPN1Q86U42 306 aaKnown RBP eCLIP29.78■■■□□ 2.36
KNOP1-203ENST00000565844 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.35
KNOP1-203ENST00000565844 DNAJC5BQ9UF47 199 aa29.75■■■□□ 2.35
KNOP1-203ENST00000565844 BICRAQ9NZM4 1560 aa29.58■■■□□ 2.33
KNOP1-203ENST00000565844 SCRIBQ14160 1630 aa29.38■■■□□ 2.29
KNOP1-203ENST00000565844 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
KNOP1-203ENST00000565844 CC2D2AQ9P2K1 1620 aa28.87■■■□□ 2.21
KNOP1-203ENST00000565844 EIF4G1Q04637 1599 aaKnown RBP28.82■■■□□ 2.2
KNOP1-203ENST00000565844 CECR2Q9BXF3 1484 aa28.7■■■□□ 2.18
KNOP1-203ENST00000565844 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
KNOP1-203ENST00000565844 BAZ1AQ9NRL2 1556 aaPredicted RBP27.92■■■□□ 2.06
KNOP1-203ENST00000565844 ATAD2BQ9ULI0 1458 aa27.87■■■□□ 2.05
KNOP1-203ENST00000565844 NCAPD3P42695 1498 aa27.85■■■□□ 2.05
KNOP1-203ENST00000565844 MROH2BQ7Z745 1585 aa27.81■■■□□ 2.04
KNOP1-203ENST00000565844 SMARCA2P51531 1590 aa27.8■■■□□ 2.04
KNOP1-203ENST00000565844 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
KNOP1-203ENST00000565844 RSF1Q96T23 1441 aaPredicted RBP27.65■■■□□ 2.02
KNOP1-203ENST00000565844 BAZ1BQ9UIG0 1483 aaKnown RBP27.65■■■□□ 2.02
KNOP1-203ENST00000565844 WIZO95785 1651 aa27.59■■■□□ 2.01
KNOP1-203ENST00000565844 PEG3Q9GZU2 1588 aa27.59■■■□□ 2.01
KNOP1-203ENST00000565844 ERCC6Q03468 1493 aa27.54■■■□□ 2
KNOP1-203ENST00000565844 NESP48681 1621 aa27.54■■■□□ 2
KNOP1-203ENST00000565844 SUPT5HO00267 1087 aaKnown RBP27.39■■□□□ 1.98
KNOP1-203ENST00000565844 CUX2O14529 1486 aa27.32■■□□□ 1.96
KNOP1-203ENST00000565844 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
KNOP1-203ENST00000565844 LAMC3Q9Y6N6 1575 aa27.26■■□□□ 1.96
KNOP1-203ENST00000565844 KIF21AQ7Z4S6 1674 aa27.25■■□□□ 1.95
KNOP1-203ENST00000565844 THOC2Q8NI27 1593 aaKnown RBP27.18■■□□□ 1.94
KNOP1-203ENST00000565844 PDS5BQ9NTI5 1447 aa27.06■■□□□ 1.92
KNOP1-203ENST00000565844 CADPSQ9ULU8 1353 aa27.05■■□□□ 1.92
KNOP1-203ENST00000565844 DNAJC5Q9H3Z4 198 aa27.05■■□□□ 1.92
KNOP1-203ENST00000565844 CCDC88BA6NC98 1476 aa26.94■■□□□ 1.9
KNOP1-203ENST00000565844 MRC2Q9UBG0 1479 aa26.86■■□□□ 1.89
KNOP1-203ENST00000565844 CEP164Q9UPV0 1460 aa26.82■■□□□ 1.88
KNOP1-203ENST00000565844 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
KNOP1-203ENST00000565844 CFTRP13569 1480 aa26.8■■□□□ 1.88
KNOP1-203ENST00000565844 WDR62O43379 1518 aa26.79■■□□□ 1.88
KNOP1-203ENST00000565844 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
KNOP1-203ENST00000565844 URB2Q14146 1524 aaKnown RBP26.61■■□□□ 1.85
KNOP1-203ENST00000565844 TOPBP1Q92547 1522 aa26.34■■□□□ 1.81
KNOP1-203ENST00000565844 ZNF608Q9ULD9 1512 aaPredicted RBP26.27■■□□□ 1.8
KNOP1-203ENST00000565844 DNMBPQ6XZF7 1577 aa26.26■■□□□ 1.79
KNOP1-203ENST00000565844 IFT140Q96RY7 1462 aa26.23■■□□□ 1.79
KNOP1-203ENST00000565844 ABCC8Q09428 1581 aa26.18■■□□□ 1.78
KNOP1-203ENST00000565844 EIF4G3O43432 1585 aaKnown RBP26.15■■□□□ 1.78
KNOP1-203ENST00000565844 TRIM41Q8WV44 630 aa26.12■■□□□ 1.77
KNOP1-203ENST00000565844 OSCARQ8IYS5 282 aa26.11■■□□□ 1.77
KNOP1-203ENST00000565844 TARBP1Q13395 1621 aaKnown RBP26.1■■□□□ 1.77
KNOP1-203ENST00000565844 WRNQ14191 1432 aaPredicted RBP eCLIP26.08■■□□□ 1.77
KNOP1-203ENST00000565844 POLA1P09884 1462 aaPredicted RBP26.07■■□□□ 1.76
KNOP1-203ENST00000565844 CUX1P39880 1505 aa26.06■■□□□ 1.76
KNOP1-203ENST00000565844 SYNJ1O43426 1573 aa26.04■■□□□ 1.76
KNOP1-203ENST00000565844 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.762e-6■■□□□ 11.8
KNOP1-203ENST00000565844 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
KNOP1-203ENST00000565844 BIVM-ERCC5R4GMW8 1640 aa26.02■■□□□ 1.76
KNOP1-203ENST00000565844 TOP2BQ02880 1626 aa26.01■■□□□ 1.75
KNOP1-203ENST00000565844 CHD1O14646 1710 aa26■■□□□ 1.75
KNOP1-203ENST00000565844 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
KNOP1-203ENST00000565844 SOGA1O94964 1423 aa25.94■■□□□ 1.74
KNOP1-203ENST00000565844 TDRD9Q8NDG6 1382 aaKnown RBP25.9■■□□□ 1.74
KNOP1-203ENST00000565844 RIMBP3CA6NJZ7 1639 aa25.89■■□□□ 1.74
KNOP1-203ENST00000565844 RIMBP3BA6NNM3 1639 aa25.89■■□□□ 1.74
KNOP1-203ENST00000565844 RIMBP3Q9UFD9 1639 aa25.89■■□□□ 1.74
KNOP1-203ENST00000565844 FBLN2P98095 1184 aa25.85■■□□□ 1.73
KNOP1-203ENST00000565844 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
KNOP1-203ENST00000565844 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
KNOP1-203ENST00000565844 SNAPC4Q5SXM2 1469 aa25.79■■□□□ 1.72
KNOP1-203ENST00000565844 ARHGEF11O15085 1522 aa25.77■■□□□ 1.72
KNOP1-203ENST00000565844 PBRM1Q86U86 1689 aa25.75■■□□□ 1.71
KNOP1-203ENST00000565844 GRIN2BQ13224 1484 aa25.67■■□□□ 1.7
KNOP1-203ENST00000565844 GAPVD1Q14C86 1478 aa25.64■■□□□ 1.7
KNOP1-203ENST00000565844 MAGI1Q96QZ7 1491 aaPredicted RBP25.64■■□□□ 1.7
KNOP1-203ENST00000565844 ABCA10Q8WWZ4 1543 aa25.64■■□□□ 1.69
KNOP1-203ENST00000565844 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
KNOP1-203ENST00000565844 CHMP7Q8WUX9 453 aaPredicted RBP25.62■■□□□ 1.69
KNOP1-203ENST00000565844 CYB5RLQ6IPT4 315 aa25.57■■□□□ 1.68
KNOP1-203ENST00000565844 SYNJ2O15056 1496 aa25.56■■□□□ 1.68
KNOP1-203ENST00000565844 CLASP1Q7Z460 1538 aa25.56■■□□□ 1.68
KNOP1-203ENST00000565844 ARAP1Q96P48 1450 aa25.55■■□□□ 1.68
KNOP1-203ENST00000565844 KIF27Q86VH2 1401 aa25.48■■□□□ 1.67
KNOP1-203ENST00000565844 RUSC2Q8N2Y8 1516 aa25.44■■□□□ 1.66
KNOP1-203ENST00000565844 ADAMTS12P58397 1594 aa25.44■■□□□ 1.66
KNOP1-203ENST00000565844 GRIN2AQ12879 1464 aa25.38■■□□□ 1.65
KNOP1-203ENST00000565844 EEA1Q15075 1411 aa25.36■■□□□ 1.65
KNOP1-203ENST00000565844 ERICH3Q5RHP9 1530 aa25.36■■□□□ 1.65
KNOP1-203ENST00000565844 CEP170Q5SW79 1584 aa25.34■■□□□ 1.65
KNOP1-203ENST00000565844 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
KNOP1-203ENST00000565844 CUL7Q14999 1698 aa25.29■■□□□ 1.64
KNOP1-203ENST00000565844 ERCC6L2Q5T890 1561 aa25.28■■□□□ 1.64
KNOP1-203ENST00000565844 FHAD1B1AJZ9 1412 aa25.28■■□□□ 1.64
KNOP1-203ENST00000565844 IGF1RP08069 1367 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms