RNA–Protein interactions for RNA: ENST00000565775.1

SIRPB1-211, Transcript of signal regulatory protein beta 1, humanhuman

TSL 4

Gene SIRPB1, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-211ENST00000565775 NISCHQ9Y2I1 1504 aa21.99■■□□□ 1.11
SIRPB1-211ENST00000565775 ABCC9O60706 1549 aa20.24■□□□□ 0.83
SIRPB1-211ENST00000565775 CCDC180Q9P1Z9 1646 aa19.87■□□□□ 0.77
SIRPB1-211ENST00000565775 DNAJC5BQ9UF47 199 aa19.24■□□□□ 0.67
SIRPB1-211ENST00000565775 RB1CC1Q8TDY2 1594 aa19.12■□□□□ 0.65
SIRPB1-211ENST00000565775 NACADO15069 1562 aa18.9■□□□□ 0.62
SIRPB1-211ENST00000565775 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
SIRPB1-211ENST00000565775 DCAF8L2P0C7V8 631 aa18.78■□□□□ 0.6
SIRPB1-211ENST00000565775 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
SIRPB1-211ENST00000565775 MYO15BQ96JP2 1530 aa18.54■□□□□ 0.56
SIRPB1-211ENST00000565775 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
SIRPB1-211ENST00000565775 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.52
SIRPB1-211ENST00000565775 CECR2Q9BXF3 1484 aa18.29■□□□□ 0.52
SIRPB1-211ENST00000565775 CC2D2AQ9P2K1 1620 aa18.23■□□□□ 0.51
SIRPB1-211ENST00000565775 ZCCHC6Q5VYS8 1495 aaKnown RBP18.15■□□□□ 0.5
SIRPB1-211ENST00000565775 DCAF1Q9Y4B6 1507 aa18.15■□□□□ 0.5
SIRPB1-211ENST00000565775 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
SIRPB1-211ENST00000565775 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
SIRPB1-211ENST00000565775 DNAJC5Q9H3Z4 198 aa17.99■□□□□ 0.47
SIRPB1-211ENST00000565775 CUX2O14529 1486 aa17.62■□□□□ 0.41
SIRPB1-211ENST00000565775 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
SIRPB1-211ENST00000565775 NCAPD3P42695 1498 aa17.46■□□□□ 0.39
SIRPB1-211ENST00000565775 ATAD2BQ9ULI0 1458 aa17.34■□□□□ 0.37
SIRPB1-211ENST00000565775 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
SIRPB1-211ENST00000565775 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
SIRPB1-211ENST00000565775 NESP48681 1621 aa17.25■□□□□ 0.35
SIRPB1-211ENST00000565775 SMARCA4P51532 1647 aa17.21■□□□□ 0.35
SIRPB1-211ENST00000565775 BAZ1BQ9UIG0 1483 aaKnown RBP17.19■□□□□ 0.34
SIRPB1-211ENST00000565775 THOC2Q8NI27 1593 aaKnown RBP17.14■□□□□ 0.33
SIRPB1-211ENST00000565775 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
SIRPB1-211ENST00000565775 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
SIRPB1-211ENST00000565775 TRIM41Q8WV44 630 aa17.09■□□□□ 0.33
SIRPB1-211ENST00000565775 PDS5BQ9NTI5 1447 aa17.07■□□□□ 0.32
SIRPB1-211ENST00000565775 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
SIRPB1-211ENST00000565775 KIF21AQ7Z4S6 1674 aa16.98■□□□□ 0.31
SIRPB1-211ENST00000565775 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
SIRPB1-211ENST00000565775 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
SIRPB1-211ENST00000565775 MROH2BQ7Z745 1585 aa16.92■□□□□ 0.3
SIRPB1-211ENST00000565775 WDR62O43379 1518 aa16.86■□□□□ 0.29
SIRPB1-211ENST00000565775 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
SIRPB1-211ENST00000565775 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
SIRPB1-211ENST00000565775 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
SIRPB1-211ENST00000565775 WIZO95785 1651 aa16.67■□□□□ 0.26
SIRPB1-211ENST00000565775 CFTRP13569 1480 aa16.64■□□□□ 0.25
SIRPB1-211ENST00000565775 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.24
SIRPB1-211ENST00000565775 RIMBP3CA6NJZ7 1639 aa16.51■□□□□ 0.23
SIRPB1-211ENST00000565775 RIMBP3BA6NNM3 1639 aa16.51■□□□□ 0.23
SIRPB1-211ENST00000565775 RIMBP3Q9UFD9 1639 aa16.51■□□□□ 0.23
SIRPB1-211ENST00000565775 TOP2AP11388 1531 aaKnown RBP16.49■□□□□ 0.23
SIRPB1-211ENST00000565775 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
SIRPB1-211ENST00000565775 RSF1Q96T23 1441 aaPredicted RBP16.46■□□□□ 0.23
SIRPB1-211ENST00000565775 ARHGEF11O15085 1522 aa16.46■□□□□ 0.23
SIRPB1-211ENST00000565775 ZNF608Q9ULD9 1512 aaPredicted RBP16.43■□□□□ 0.22
SIRPB1-211ENST00000565775 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
SIRPB1-211ENST00000565775 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
SIRPB1-211ENST00000565775 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
SIRPB1-211ENST00000565775 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
SIRPB1-211ENST00000565775 ABCC8Q09428 1581 aa16.34■□□□□ 0.21
SIRPB1-211ENST00000565775 EIF4G3O43432 1585 aaKnown RBP16.32■□□□□ 0.2
SIRPB1-211ENST00000565775 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
SIRPB1-211ENST00000565775 FBLN2P98095 1184 aa16.28■□□□□ 0.2
SIRPB1-211ENST00000565775 ARAP1Q96P48 1450 aa16.27■□□□□ 0.19
SIRPB1-211ENST00000565775 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
SIRPB1-211ENST00000565775 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.19
SIRPB1-211ENST00000565775 CHD1O14646 1710 aa16.22■□□□□ 0.19
SIRPB1-211ENST00000565775 TARBP1Q13395 1621 aaKnown RBP16.19■□□□□ 0.18
SIRPB1-211ENST00000565775 AEBP2Q6ZN18 517 aaPredicted RBP16.17■□□□□ 0.18
SIRPB1-211ENST00000565775 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
SIRPB1-211ENST00000565775 TDRD9Q8NDG6 1382 aaKnown RBP16.12■□□□□ 0.17
SIRPB1-211ENST00000565775 SOGA1O94964 1423 aa16.11■□□□□ 0.17
SIRPB1-211ENST00000565775 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
SIRPB1-211ENST00000565775 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
SIRPB1-211ENST00000565775 SNAPC4Q5SXM2 1469 aa16.09■□□□□ 0.17
SIRPB1-211ENST00000565775 CLASP1Q7Z460 1538 aa16.07■□□□□ 0.16
SIRPB1-211ENST00000565775 SYNJ1O43426 1573 aa16.07■□□□□ 0.16
SIRPB1-211ENST00000565775 WDR97A6NE52 1622 aa16.06■□□□□ 0.16
SIRPB1-211ENST00000565775 MAGI1Q96QZ7 1491 aaPredicted RBP16.06■□□□□ 0.16
SIRPB1-211ENST00000565775 GRIN2BQ13224 1484 aa16.02■□□□□ 0.15
SIRPB1-211ENST00000565775 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
SIRPB1-211ENST00000565775 SYNJ2O15056 1496 aa16■□□□□ 0.15
SIRPB1-211ENST00000565775 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
SIRPB1-211ENST00000565775 CUX1P39880 1505 aa15.92■□□□□ 0.14
SIRPB1-211ENST00000565775 PBRM1Q86U86 1689 aa15.84■□□□□ 0.13
SIRPB1-211ENST00000565775 ABCA10Q8WWZ4 1543 aa15.82■□□□□ 0.12
SIRPB1-211ENST00000565775 ABCA5Q8WWZ7 1642 aa15.79■□□□□ 0.12
SIRPB1-211ENST00000565775 GRIN2AQ12879 1464 aa15.79■□□□□ 0.12
SIRPB1-211ENST00000565775 ERCC6L2Q5T890 1561 aa15.76■□□□□ 0.11
SIRPB1-211ENST00000565775 NUP160Q12769 1436 aa15.76■□□□□ 0.11
SIRPB1-211ENST00000565775 CEP170Q5SW79 1584 aa15.75■□□□□ 0.11
SIRPB1-211ENST00000565775 WRNQ14191 1432 aaPredicted RBP eCLIP15.73■□□□□ 0.11
SIRPB1-211ENST00000565775 ADAMTS12P58397 1594 aa15.72■□□□□ 0.11
SIRPB1-211ENST00000565775 FHAD1B1AJZ9 1412 aa15.7■□□□□ 0.1
SIRPB1-211ENST00000565775 SHROOM2Q13796 1616 aa15.68■□□□□ 0.1
SIRPB1-211ENST00000565775 PRG4Q92954 1404 aaPredicted RBP15.65■□□□□ 0.1
SIRPB1-211ENST00000565775 NPM1P06748 294 aaKnown RBP eCLIP15.63■□□□□ 0.09
SIRPB1-211ENST00000565775 FAM69CQ0P6D2 419 aa15.62■□□□□ 0.09
SIRPB1-211ENST00000565775 ERICH3Q5RHP9 1530 aa15.62■□□□□ 0.09
SIRPB1-211ENST00000565775 JPH4Q96JJ6 628 aa15.61■□□□□ 0.09
SIRPB1-211ENST00000565775 KIF13AQ9H1H9 1805 aa15.61■□□□□ 0.09
SIRPB1-211ENST00000565775 ABCC10Q5T3U5 1492 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms