RNA–Protein interactions for RNA: ENST00000565658.1

GFER-203, Transcript of growth factor, augmenter of liver regeneration, humanhuman

TSL 1 (best)

Gene GFER, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFER-203ENST00000565658 NISCHQ9Y2I1 1504 aa37.12■■■■□ 3.53
GFER-203ENST00000565658 CCDC180Q9P1Z9 1646 aa33.05■■■□□ 2.88
GFER-203ENST00000565658 ABCC9O60706 1549 aa32.45■■■□□ 2.79
GFER-203ENST00000565658 RB1CC1Q8TDY2 1594 aa31.14■■■□□ 2.58
GFER-203ENST00000565658 NACADO15069 1562 aa31.08■■■□□ 2.57
GFER-203ENST00000565658 DCAF8L2P0C7V8 631 aa30.98■■■□□ 2.55
GFER-203ENST00000565658 ZCCHC6Q5VYS8 1495 aaKnown RBP30.92■■■□□ 2.54
GFER-203ENST00000565658 MYO15BQ96JP2 1530 aa30.86■■■□□ 2.53
GFER-203ENST00000565658 DCAF1Q9Y4B6 1507 aa30.69■■■□□ 2.5
GFER-203ENST00000565658 UNC13AQ9UPW8 1703 aa30.52■■■□□ 2.48
GFER-203ENST00000565658 PABPN1Q86U42 306 aaKnown RBP eCLIP30.28■■■□□ 2.44
GFER-203ENST00000565658 BICRAQ9NZM4 1560 aa30.27■■■□□ 2.44
GFER-203ENST00000565658 SCRIBQ14160 1630 aa30.17■■■□□ 2.42
GFER-203ENST00000565658 DNAJC5BQ9UF47 199 aa29.9■■■□□ 2.38
GFER-203ENST00000565658 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
GFER-203ENST00000565658 EIF4G1Q04637 1599 aaKnown RBP29.45■■■□□ 2.3
GFER-203ENST00000565658 CC2D2AQ9P2K1 1620 aa29.36■■■□□ 2.29
GFER-203ENST00000565658 CECR2Q9BXF3 1484 aa29.15■■■□□ 2.26
GFER-203ENST00000565658 SMARCA4P51532 1647 aa28.85■■■□□ 2.21
GFER-203ENST00000565658 BAZ1AQ9NRL2 1556 aaPredicted RBP28.76■■■□□ 2.2
GFER-203ENST00000565658 ATAD2BQ9ULI0 1458 aa28.7■■■□□ 2.19
GFER-203ENST00000565658 NCAPD3P42695 1498 aa28.69■■■□□ 2.18
GFER-203ENST00000565658 SMARCA2P51531 1590 aa28.64■■■□□ 2.17
GFER-203ENST00000565658 MROH2BQ7Z745 1585 aa28.63■■■□□ 2.17
GFER-203ENST00000565658 PEG3Q9GZU2 1588 aa28.56■■■□□ 2.16
GFER-203ENST00000565658 HMGXB3Q12766 1538 aa28.55■■■□□ 2.16
GFER-203ENST00000565658 BAZ1BQ9UIG0 1483 aaKnown RBP28.44■■■□□ 2.14
GFER-203ENST00000565658 WIZO95785 1651 aa28.32■■■□□ 2.12
GFER-203ENST00000565658 RSF1Q96T23 1441 aaPredicted RBP28.24■■■□□ 2.11
GFER-203ENST00000565658 NESP48681 1621 aa28.08■■■□□ 2.09
GFER-203ENST00000565658 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
GFER-203ENST00000565658 LAMC3Q9Y6N6 1575 aa27.95■■■□□ 2.06
GFER-203ENST00000565658 ERCC6Q03468 1493 aa27.93■■■□□ 2.06
GFER-203ENST00000565658 CADPSQ9ULU8 1353 aa27.82■■■□□ 2.04
GFER-203ENST00000565658 KIF21AQ7Z4S6 1674 aa27.75■■■□□ 2.03
GFER-203ENST00000565658 PDS5BQ9NTI5 1447 aa27.73■■■□□ 2.03
GFER-203ENST00000565658 CUX2O14529 1486 aa27.69■■■□□ 2.02
GFER-203ENST00000565658 THOC2Q8NI27 1593 aaKnown RBP27.68■■■□□ 2.02
GFER-203ENST00000565658 CFTRP13569 1480 aa27.66■■■□□ 2.02
GFER-203ENST00000565658 CCDC88BA6NC98 1476 aa27.65■■■□□ 2.02
GFER-203ENST00000565658 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
GFER-203ENST00000565658 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
GFER-203ENST00000565658 MRC2Q9UBG0 1479 aa27.48■■□□□ 1.99
GFER-203ENST00000565658 PRDM2Q13029 1718 aa27.48■■□□□ 1.99
GFER-203ENST00000565658 WDR62O43379 1518 aa27.42■■□□□ 1.98
GFER-203ENST00000565658 SUPT5HO00267 1087 aaKnown RBP27.4■■□□□ 1.98
GFER-203ENST00000565658 URB2Q14146 1524 aaKnown RBP27.3■■□□□ 1.96
GFER-203ENST00000565658 TOPBP1Q92547 1522 aa27.1■■□□□ 1.93
GFER-203ENST00000565658 DNMBPQ6XZF7 1577 aa27.05■■□□□ 1.92
GFER-203ENST00000565658 ABCC8Q09428 1581 aa27.02■■□□□ 1.92
GFER-203ENST00000565658 DNAJC5Q9H3Z4 198 aa26.97■■□□□ 1.91
GFER-203ENST00000565658 IFT140Q96RY7 1462 aa26.92■■□□□ 1.9
GFER-203ENST00000565658 CUX1P39880 1505 aa26.86■■□□□ 1.89
GFER-203ENST00000565658 POLA1P09884 1462 aaPredicted RBP26.86■■□□□ 1.89
GFER-203ENST00000565658 ZNF608Q9ULD9 1512 aaPredicted RBP26.86■■□□□ 1.89
GFER-203ENST00000565658 TARBP1Q13395 1621 aaKnown RBP26.82■■□□□ 1.88
GFER-203ENST00000565658 FGD5Q6ZNL6 1462 aa26.77■■□□□ 1.88
GFER-203ENST00000565658 RAD54L2Q9Y4B4 1467 aa26.75■■□□□ 1.87
GFER-203ENST00000565658 EIF4G3O43432 1585 aaKnown RBP26.74■■□□□ 1.87
GFER-203ENST00000565658 SOGA1O94964 1423 aa26.71■■□□□ 1.87
GFER-203ENST00000565658 AQRO60306 1485 aaKnown RBP eCLIP26.66■■□□□ 1.86
GFER-203ENST00000565658 WRNQ14191 1432 aaPredicted RBP eCLIP26.62■■□□□ 1.85
GFER-203ENST00000565658 SYNJ1O43426 1573 aa26.6■■□□□ 1.85
GFER-203ENST00000565658 WDR97A6NE52 1622 aa26.6■■□□□ 1.85
GFER-203ENST00000565658 BIVM-ERCC5R4GMW8 1640 aa26.6■■□□□ 1.85
GFER-203ENST00000565658 TDRD9Q8NDG6 1382 aaKnown RBP26.59■■□□□ 1.85
GFER-203ENST00000565658 TOP2BQ02880 1626 aa26.58■■□□□ 1.85
GFER-203ENST00000565658 ABCA10Q8WWZ4 1543 aa26.5■■□□□ 1.83
GFER-203ENST00000565658 OSCARQ8IYS5 282 aa26.48■■□□□ 1.83
GFER-203ENST00000565658 CHD1O14646 1710 aa26.44■■□□□ 1.82
GFER-203ENST00000565658 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
GFER-203ENST00000565658 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
GFER-203ENST00000565658 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
GFER-203ENST00000565658 GAPVD1Q14C86 1478 aa26.41■■□□□ 1.82
GFER-203ENST00000565658 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
GFER-203ENST00000565658 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
GFER-203ENST00000565658 FBLN2P98095 1184 aa26.31■■□□□ 1.8
GFER-203ENST00000565658 SYNJ2O15056 1496 aa26.26■■□□□ 1.79
GFER-203ENST00000565658 CHMP7Q8WUX9 453 aaPredicted RBP26.21■■□□□ 1.79
GFER-203ENST00000565658 ADAMTS12P58397 1594 aa26.18■■□□□ 1.78
GFER-203ENST00000565658 ERICH3Q5RHP9 1530 aa26.17■■□□□ 1.78
GFER-203ENST00000565658 RIMBP3CA6NJZ7 1639 aa26.16■■□□□ 1.78
GFER-203ENST00000565658 RIMBP3BA6NNM3 1639 aa26.16■■□□□ 1.78
GFER-203ENST00000565658 RIMBP3Q9UFD9 1639 aa26.16■■□□□ 1.78
GFER-203ENST00000565658 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.78
GFER-203ENST00000565658 ARHGEF11O15085 1522 aa26.13■■□□□ 1.77
GFER-203ENST00000565658 GRIN2AQ12879 1464 aa26.1■■□□□ 1.77
GFER-203ENST00000565658 FHAD1B1AJZ9 1412 aa26.09■■□□□ 1.77
GFER-203ENST00000565658 KIF27Q86VH2 1401 aa26.04■■□□□ 1.76
GFER-203ENST00000565658 TRIM41Q8WV44 630 aa26.02■■□□□ 1.76
GFER-203ENST00000565658 CEP170Q5SW79 1584 aa26■■□□□ 1.75
GFER-203ENST00000565658 NUP160Q12769 1436 aa25.99■■□□□ 1.75
GFER-203ENST00000565658 IGF1RP08069 1367 aa25.98■■□□□ 1.75
GFER-203ENST00000565658 ARAP1Q96P48 1450 aa25.93■■□□□ 1.74
GFER-203ENST00000565658 CUL7Q14999 1698 aa25.91■■□□□ 1.74
GFER-203ENST00000565658 CYB5RLQ6IPT4 315 aa25.84■■□□□ 1.73
GFER-203ENST00000565658 RUSC2Q8N2Y8 1516 aa25.84■■□□□ 1.73
GFER-203ENST00000565658 SHROOM2Q13796 1616 aa25.82■■□□□ 1.72
GFER-203ENST00000565658 CARMIL1Q5VZK9 1371 aa25.81■■□□□ 1.72
GFER-203ENST00000565658 ERCC6L2Q5T890 1561 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 345.7 ms