RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 NISCHQ9Y2I1 1504 aa27.08■■□□□ 1.93
NSMCE1-210ENST00000565626 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
NSMCE1-210ENST00000565626 ABCC9O60706 1549 aa24.04■■□□□ 1.44
NSMCE1-210ENST00000565626 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
NSMCE1-210ENST00000565626 DCAF8L2P0C7V8 631 aa22.86■■□□□ 1.25
NSMCE1-210ENST00000565626 NACADO15069 1562 aa22.78■■□□□ 1.24
NSMCE1-210ENST00000565626 MYO15BQ96JP2 1530 aa22.51■■□□□ 1.19
NSMCE1-210ENST00000565626 ZCCHC6Q5VYS8 1495 aaKnown RBP22.48■■□□□ 1.19
NSMCE1-210ENST00000565626 PABPN1Q86U42 306 aaKnown RBP eCLIP22.47■■□□□ 1.19
NSMCE1-210ENST00000565626 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
NSMCE1-210ENST00000565626 UNC13AQ9UPW8 1703 aa22.35■■□□□ 1.17
NSMCE1-210ENST00000565626 DCAF1Q9Y4B6 1507 aa22.32■■□□□ 1.16
NSMCE1-210ENST00000565626 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
NSMCE1-210ENST00000565626 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
NSMCE1-210ENST00000565626 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
NSMCE1-210ENST00000565626 EIF4G1Q04637 1599 aaKnown RBP21.68■■□□□ 1.06
NSMCE1-210ENST00000565626 CC2D2AQ9P2K1 1620 aa21.67■■□□□ 1.06
NSMCE1-210ENST00000565626 CECR2Q9BXF3 1484 aa21.6■■□□□ 1.05
NSMCE1-210ENST00000565626 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
NSMCE1-210ENST00000565626 ATAD2BQ9ULI0 1458 aa21.06■□□□□ 0.96
NSMCE1-210ENST00000565626 SMARCA4P51532 1647 aa21.05■□□□□ 0.96
NSMCE1-210ENST00000565626 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
NSMCE1-210ENST00000565626 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
NSMCE1-210ENST00000565626 MROH2BQ7Z745 1585 aa20.9■□□□□ 0.94
NSMCE1-210ENST00000565626 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
NSMCE1-210ENST00000565626 BAZ1BQ9UIG0 1483 aaKnown RBP20.84■□□□□ 0.93
NSMCE1-210ENST00000565626 PEG3Q9GZU2 1588 aa20.82■□□□□ 0.92
NSMCE1-210ENST00000565626 NESP48681 1621 aa20.72■□□□□ 0.91
NSMCE1-210ENST00000565626 ERCC6Q03468 1493 aa20.69■□□□□ 0.9
NSMCE1-210ENST00000565626 WIZO95785 1651 aa20.64■□□□□ 0.9
NSMCE1-210ENST00000565626 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
NSMCE1-210ENST00000565626 CUX2O14529 1486 aa20.54■□□□□ 0.88
NSMCE1-210ENST00000565626 LAMC3Q9Y6N6 1575 aa20.51■□□□□ 0.87
NSMCE1-210ENST00000565626 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
NSMCE1-210ENST00000565626 PDS5BQ9NTI5 1447 aa20.42■□□□□ 0.86
NSMCE1-210ENST00000565626 THOC2Q8NI27 1593 aaKnown RBP20.39■□□□□ 0.85
NSMCE1-210ENST00000565626 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
NSMCE1-210ENST00000565626 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
NSMCE1-210ENST00000565626 DNAJC5Q9H3Z4 198 aa20.34■□□□□ 0.85
NSMCE1-210ENST00000565626 CFTRP13569 1480 aa20.25■□□□□ 0.83
NSMCE1-210ENST00000565626 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
NSMCE1-210ENST00000565626 FANCD2Q9BXW9 1451 aa20.22■□□□□ 0.83
NSMCE1-210ENST00000565626 CEP164Q9UPV0 1460 aa20.2■□□□□ 0.82
NSMCE1-210ENST00000565626 CCDC88BA6NC98 1476 aa20.18■□□□□ 0.82
NSMCE1-210ENST00000565626 WDR62O43379 1518 aa20.17■□□□□ 0.82
NSMCE1-210ENST00000565626 URB2Q14146 1524 aaKnown RBP20.06■□□□□ 0.8
NSMCE1-210ENST00000565626 PRDM2Q13029 1718 aa19.96■□□□□ 0.79
NSMCE1-210ENST00000565626 SUPT5HO00267 1087 aaKnown RBP19.88■□□□□ 0.77
NSMCE1-210ENST00000565626 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
NSMCE1-210ENST00000565626 ZNF608Q9ULD9 1512 aaPredicted RBP19.8■□□□□ 0.76
NSMCE1-210ENST00000565626 IFT140Q96RY7 1462 aa19.79■□□□□ 0.76
NSMCE1-210ENST00000565626 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
NSMCE1-210ENST00000565626 ABCC8Q09428 1581 aa19.76■□□□□ 0.75
NSMCE1-210ENST00000565626 OSCARQ8IYS5 282 aa19.69■□□□□ 0.74
NSMCE1-210ENST00000565626 POLA1P09884 1462 aaPredicted RBP19.68■□□□□ 0.74
NSMCE1-210ENST00000565626 AQRO60306 1485 aaKnown RBP eCLIP19.65■□□□□ 0.74
NSMCE1-210ENST00000565626 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
NSMCE1-210ENST00000565626 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
NSMCE1-210ENST00000565626 EIF4G3O43432 1585 aaKnown RBP19.63■□□□□ 0.73
NSMCE1-210ENST00000565626 CUX1P39880 1505 aa19.61■□□□□ 0.73
NSMCE1-210ENST00000565626 SOGA1O94964 1423 aa19.6■□□□□ 0.73
NSMCE1-210ENST00000565626 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
NSMCE1-210ENST00000565626 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
NSMCE1-210ENST00000565626 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
NSMCE1-210ENST00000565626 FBLN2P98095 1184 aa19.49■□□□□ 0.71
NSMCE1-210ENST00000565626 CHD1O14646 1710 aa19.42■□□□□ 0.7
NSMCE1-210ENST00000565626 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
NSMCE1-210ENST00000565626 RIMBP3CA6NJZ7 1639 aa19.38■□□□□ 0.69
NSMCE1-210ENST00000565626 RIMBP3BA6NNM3 1639 aa19.38■□□□□ 0.69
NSMCE1-210ENST00000565626 GRIN2BQ13224 1484 aa19.38■□□□□ 0.69
NSMCE1-210ENST00000565626 RIMBP3Q9UFD9 1639 aa19.38■□□□□ 0.69
NSMCE1-210ENST00000565626 WDR97A6NE52 1622 aa19.37■□□□□ 0.69
NSMCE1-210ENST00000565626 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
NSMCE1-210ENST00000565626 ARHGEF11O15085 1522 aa19.36■□□□□ 0.69
NSMCE1-210ENST00000565626 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
NSMCE1-210ENST00000565626 GAPVD1Q14C86 1478 aa19.35■□□□□ 0.69
NSMCE1-210ENST00000565626 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
NSMCE1-210ENST00000565626 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
NSMCE1-210ENST00000565626 MAGI1Q96QZ7 1491 aaPredicted RBP19.34■□□□□ 0.69
NSMCE1-210ENST00000565626 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
NSMCE1-210ENST00000565626 ABCA5Q8WWZ7 1642 aa19.29■□□□□ 0.68
NSMCE1-210ENST00000565626 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
NSMCE1-210ENST00000565626 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
NSMCE1-210ENST00000565626 PBRM1Q86U86 1689 aa19.27■□□□□ 0.68
NSMCE1-210ENST00000565626 CYB5RLQ6IPT4 315 aa19.27■□□□□ 0.68
NSMCE1-210ENST00000565626 CLASP1Q7Z460 1538 aa19.23■□□□□ 0.67
NSMCE1-210ENST00000565626 ARAP1Q96P48 1450 aa19.22■□□□□ 0.67
NSMCE1-210ENST00000565626 GRIN2AQ12879 1464 aa19.14■□□□□ 0.65
NSMCE1-210ENST00000565626 ADAMTS12P58397 1594 aa19.14■□□□□ 0.65
NSMCE1-210ENST00000565626 FHAD1B1AJZ9 1412 aa19.1■□□□□ 0.65
NSMCE1-210ENST00000565626 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
NSMCE1-210ENST00000565626 NUP160Q12769 1436 aa19.07■□□□□ 0.64
NSMCE1-210ENST00000565626 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
NSMCE1-210ENST00000565626 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.63
NSMCE1-210ENST00000565626 IGF1RP08069 1367 aa18.98■□□□□ 0.63
NSMCE1-210ENST00000565626 KIF27Q86VH2 1401 aa18.97■□□□□ 0.63
NSMCE1-210ENST00000565626 TRHP20396 242 aaPredicted RBP18.96■□□□□ 0.63
NSMCE1-210ENST00000565626 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
NSMCE1-210ENST00000565626 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
NSMCE1-210ENST00000565626 PRG4Q92954 1404 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms