RNA–Protein interactions for RNA: ENST00000565582.5

FANCA-218, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-218ENST00000565582 NISCHQ9Y2I1 1504 aa29.86■■■□□ 2.37
FANCA-218ENST00000565582 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
FANCA-218ENST00000565582 ABCC9O60706 1549 aa26.7■■□□□ 1.87
FANCA-218ENST00000565582 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
FANCA-218ENST00000565582 NACADO15069 1562 aa25.23■■□□□ 1.63
FANCA-218ENST00000565582 DCAF8L2P0C7V8 631 aa25.16■■□□□ 1.62
FANCA-218ENST00000565582 DNAJC5BQ9UF47 199 aa24.91■■□□□ 1.58
FANCA-218ENST00000565582 UNC13AQ9UPW8 1703 aa24.89■■□□□ 1.58
FANCA-218ENST00000565582 MYO15BQ96JP2 1530 aa24.88■■□□□ 1.57
FANCA-218ENST00000565582 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.572e-8■□□□□ 10
FANCA-218ENST00000565582 ZCCHC6Q5VYS8 1495 aaKnown RBP24.8■■□□□ 1.56
FANCA-218ENST00000565582 BICRAQ9NZM4 1560 aa24.71■■□□□ 1.55
FANCA-218ENST00000565582 DCAF1Q9Y4B6 1507 aa24.62■■□□□ 1.53
FANCA-218ENST00000565582 SCRIBQ14160 1630 aa24.47■■□□□ 1.51
FANCA-218ENST00000565582 SHROOM4Q9ULL8 1493 aa24.29■■□□□ 1.48
FANCA-218ENST00000565582 CC2D2AQ9P2K1 1620 aa24.11■■□□□ 1.45
FANCA-218ENST00000565582 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.45
FANCA-218ENST00000565582 CECR2Q9BXF3 1484 aa24.01■■□□□ 1.43
FANCA-218ENST00000565582 SMARCA4P51532 1647 aa23.31■■□□□ 1.32
FANCA-218ENST00000565582 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
FANCA-218ENST00000565582 ATAD2BQ9ULI0 1458 aa23.27■■□□□ 1.32
FANCA-218ENST00000565582 SMARCA2P51531 1590 aa23.19■■□□□ 1.3
FANCA-218ENST00000565582 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
FANCA-218ENST00000565582 HMGXB3Q12766 1538 aa23.16■■□□□ 1.3
FANCA-218ENST00000565582 BAZ1BQ9UIG0 1483 aaKnown RBP23.07■■□□□ 1.28
FANCA-218ENST00000565582 MROH2BQ7Z745 1585 aa23.06■■□□□ 1.28
FANCA-218ENST00000565582 PEG3Q9GZU2 1588 aa23.03■■□□□ 1.28
FANCA-218ENST00000565582 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
FANCA-218ENST00000565582 NESP48681 1621 aa22.99■■□□□ 1.27
FANCA-218ENST00000565582 CUX2O14529 1486 aa22.89■■□□□ 1.25
FANCA-218ENST00000565582 WIZO95785 1651 aa22.81■■□□□ 1.24
FANCA-218ENST00000565582 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
FANCA-218ENST00000565582 THOC2Q8NI27 1593 aaKnown RBP22.73■■□□□ 1.23
FANCA-218ENST00000565582 DNAJC5Q9H3Z4 198 aa22.72■■□□□ 1.23
FANCA-218ENST00000565582 KIF21AQ7Z4S6 1674 aa22.7■■□□□ 1.22
FANCA-218ENST00000565582 PDS5BQ9NTI5 1447 aa22.6■■□□□ 1.21
FANCA-218ENST00000565582 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
FANCA-218ENST00000565582 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.21
FANCA-218ENST00000565582 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
FANCA-218ENST00000565582 MRC2Q9UBG0 1479 aa22.46■■□□□ 1.19
FANCA-218ENST00000565582 WDR62O43379 1518 aa22.41■■□□□ 1.18
FANCA-218ENST00000565582 CEP164Q9UPV0 1460 aa22.4■■□□□ 1.18
FANCA-218ENST00000565582 FANCD2Q9BXW9 1451 aa22.38■■□□□ 1.17
FANCA-218ENST00000565582 CFTRP13569 1480 aa22.37■■□□□ 1.17
FANCA-218ENST00000565582 CCDC88BA6NC98 1476 aa22.22■■□□□ 1.15
FANCA-218ENST00000565582 URB2Q14146 1524 aaKnown RBP22.21■■□□□ 1.15
FANCA-218ENST00000565582 PRDM2Q13029 1718 aa22.2■■□□□ 1.14
FANCA-218ENST00000565582 TOPBP1Q92547 1522 aa21.97■■□□□ 1.11
FANCA-218ENST00000565582 ZNF608Q9ULD9 1512 aaPredicted RBP21.94■■□□□ 1.1
FANCA-218ENST00000565582 IFT140Q96RY7 1462 aa21.91■■□□□ 1.1
FANCA-218ENST00000565582 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
FANCA-218ENST00000565582 TRIM41Q8WV44 630 aa21.86■■□□□ 1.09
FANCA-218ENST00000565582 ABCC8Q09428 1581 aa21.84■■□□□ 1.09
FANCA-218ENST00000565582 EIF4G3O43432 1585 aaKnown RBP21.83■■□□□ 1.09
FANCA-218ENST00000565582 OSCARQ8IYS5 282 aa21.82■■□□□ 1.08
FANCA-218ENST00000565582 TARBP1Q13395 1621 aaKnown RBP21.78■■□□□ 1.08
FANCA-218ENST00000565582 POLA1P09884 1462 aaPredicted RBP21.77■■□□□ 1.07
FANCA-218ENST00000565582 AQRO60306 1485 aaKnown RBP eCLIP21.72■■□□□ 1.075e-10■■■□□ 18.1
FANCA-218ENST00000565582 RAD54L2Q9Y4B4 1467 aa21.7■■□□□ 1.06
FANCA-218ENST00000565582 SUPT5HO00267 1087 aaKnown RBP21.69■■□□□ 1.06
FANCA-218ENST00000565582 CUX1P39880 1505 aa21.66■■□□□ 1.06
FANCA-218ENST00000565582 FGD5Q6ZNL6 1462 aa21.65■■□□□ 1.06
FANCA-218ENST00000565582 CHD1O14646 1710 aa21.65■■□□□ 1.06
FANCA-218ENST00000565582 RIMBP3CA6NJZ7 1639 aa21.64■■□□□ 1.05
FANCA-218ENST00000565582 RIMBP3BA6NNM3 1639 aa21.64■■□□□ 1.05
FANCA-218ENST00000565582 RIMBP3Q9UFD9 1639 aa21.64■■□□□ 1.05
FANCA-218ENST00000565582 SOGA1O94964 1423 aa21.62■■□□□ 1.05
FANCA-218ENST00000565582 TDRD9Q8NDG6 1382 aaKnown RBP21.6■■□□□ 1.05
FANCA-218ENST00000565582 ARHGEF11O15085 1522 aa21.57■■□□□ 1.04
FANCA-218ENST00000565582 FBLN2P98095 1184 aa21.54■■□□□ 1.04
FANCA-218ENST00000565582 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.04
FANCA-218ENST00000565582 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
FANCA-218ENST00000565582 GRIN2BQ13224 1484 aa21.44■■□□□ 1.02
FANCA-218ENST00000565582 PBRM1Q86U86 1689 aa21.42■■□□□ 1.02
FANCA-218ENST00000565582 MAGI1Q96QZ7 1491 aaPredicted RBP21.42■■□□□ 1.02
FANCA-218ENST00000565582 ABCA5Q8WWZ7 1642 aa21.38■■□□□ 1.01
FANCA-218ENST00000565582 CLASP1Q7Z460 1538 aa21.38■■□□□ 1.01
FANCA-218ENST00000565582 GAPVD1Q14C86 1478 aa21.38■■□□□ 1.01
FANCA-218ENST00000565582 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
FANCA-218ENST00000565582 ABCA10Q8WWZ4 1543 aa21.37■■□□□ 1.01
FANCA-218ENST00000565582 CYB5RLQ6IPT4 315 aa21.36■■□□□ 1.01
FANCA-218ENST00000565582 SYNJ2O15056 1496 aa21.35■■□□□ 1.01
FANCA-218ENST00000565582 CHMP7Q8WUX9 453 aaPredicted RBP21.35■■□□□ 1.01
FANCA-218ENST00000565582 SYNJ1O43426 1573 aa21.35■■□□□ 1.01
FANCA-218ENST00000565582 BIVM-ERCC5R4GMW8 1640 aa21.33■■□□□ 1
FANCA-218ENST00000565582 TOP2BQ02880 1626 aa21.32■■□□□ 1
FANCA-218ENST00000565582 WRNQ14191 1432 aaPredicted RBP eCLIP21.3■■□□□ 1
FANCA-218ENST00000565582 ADAMTS12P58397 1594 aa21.23■□□□□ 0.99
FANCA-218ENST00000565582 GRIN2AQ12879 1464 aa21.19■□□□□ 0.98
FANCA-218ENST00000565582 CEP170Q5SW79 1584 aa21.14■□□□□ 0.97
FANCA-218ENST00000565582 ERCC6L2Q5T890 1561 aa21.1■□□□□ 0.97
FANCA-218ENST00000565582 ERICH3Q5RHP9 1530 aa21.1■□□□□ 0.97
FANCA-218ENST00000565582 FHAD1B1AJZ9 1412 aa21.1■□□□□ 0.97
FANCA-218ENST00000565582 TRHP20396 242 aaPredicted RBP21.09■□□□□ 0.97
FANCA-218ENST00000565582 NUP160Q12769 1436 aa21.09■□□□□ 0.97
FANCA-218ENST00000565582 SHROOM2Q13796 1616 aa21■□□□□ 0.95
FANCA-218ENST00000565582 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
FANCA-218ENST00000565582 PRG4Q92954 1404 aaPredicted RBP20.88■□□□□ 0.93
FANCA-218ENST00000565582 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
FANCA-218ENST00000565582 CUL7Q14999 1698 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms