RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 NISCHQ9Y2I1 1504 aa21.47■■□□□ 1.03
CNEP1R1-206ENST00000565556 CCDC180Q9P1Z9 1646 aa18.86■□□□□ 0.61
CNEP1R1-206ENST00000565556 ZCCHC6Q5VYS8 1495 aaKnown RBP18■□□□□ 0.47
CNEP1R1-206ENST00000565556 ABCC9O60706 1549 aa17.87■□□□□ 0.45
CNEP1R1-206ENST00000565556 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
CNEP1R1-206ENST00000565556 DCAF8L2P0C7V8 631 aa17.73■□□□□ 0.43
CNEP1R1-206ENST00000565556 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
CNEP1R1-206ENST00000565556 NACADO15069 1562 aa17.6■□□□□ 0.41
CNEP1R1-206ENST00000565556 RB1CC1Q8TDY2 1594 aa17.47■□□□□ 0.39
CNEP1R1-206ENST00000565556 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
CNEP1R1-206ENST00000565556 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
CNEP1R1-206ENST00000565556 UNC13AQ9UPW8 1703 aa17.08■□□□□ 0.32
CNEP1R1-206ENST00000565556 BICRAQ9NZM4 1560 aa16.9■□□□□ 0.3
CNEP1R1-206ENST00000565556 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
CNEP1R1-206ENST00000565556 AEBP2Q6ZN18 517 aaPredicted RBP16.84■□□□□ 0.29
CNEP1R1-206ENST00000565556 PABPN1Q86U42 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
CNEP1R1-206ENST00000565556 CECR2Q9BXF3 1484 aa16.64■□□□□ 0.25
CNEP1R1-206ENST00000565556 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
CNEP1R1-206ENST00000565556 SUPT5HO00267 1087 aaKnown RBP16.6■□□□□ 0.25
CNEP1R1-206ENST00000565556 RSF1Q96T23 1441 aaPredicted RBP16.57■□□□□ 0.24
CNEP1R1-206ENST00000565556 MROH2BQ7Z745 1585 aa16.55■□□□□ 0.24
CNEP1R1-206ENST00000565556 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
CNEP1R1-206ENST00000565556 EIF4G1Q04637 1599 aaKnown RBP16.41■□□□□ 0.22
CNEP1R1-206ENST00000565556 WIZO95785 1651 aa16.41■□□□□ 0.22
CNEP1R1-206ENST00000565556 PEG3Q9GZU2 1588 aa16.37■□□□□ 0.21
CNEP1R1-206ENST00000565556 SMARCA2P51531 1590 aa16.33■□□□□ 0.21
CNEP1R1-206ENST00000565556 ATAD2BQ9ULI0 1458 aa16.3■□□□□ 0.2
CNEP1R1-206ENST00000565556 TOP2AP11388 1531 aaKnown RBP16.27■□□□□ 0.2
CNEP1R1-206ENST00000565556 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
CNEP1R1-206ENST00000565556 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
CNEP1R1-206ENST00000565556 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
CNEP1R1-206ENST00000565556 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
CNEP1R1-206ENST00000565556 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.16
CNEP1R1-206ENST00000565556 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
CNEP1R1-206ENST00000565556 CFTRP13569 1480 aa15.8■□□□□ 0.12
CNEP1R1-206ENST00000565556 CADPSQ9ULU8 1353 aa15.78■□□□□ 0.12
CNEP1R1-206ENST00000565556 PRDM2Q13029 1718 aa15.76■□□□□ 0.11
CNEP1R1-206ENST00000565556 LAMC3Q9Y6N6 1575 aa15.71■□□□□ 0.1
CNEP1R1-206ENST00000565556 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
CNEP1R1-206ENST00000565556 ABCC8Q09428 1581 aa15.65■□□□□ 0.1
CNEP1R1-206ENST00000565556 NESP48681 1621 aa15.63■□□□□ 0.09
CNEP1R1-206ENST00000565556 WRNQ14191 1432 aaPredicted RBP eCLIP15.62■□□□□ 0.09
CNEP1R1-206ENST00000565556 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
CNEP1R1-206ENST00000565556 PDS5BQ9NTI5 1447 aa15.59■□□□□ 0.09
CNEP1R1-206ENST00000565556 SYNJ1O43426 1573 aa15.53■□□□□ 0.08
CNEP1R1-206ENST00000565556 TOP2BQ02880 1626 aa15.53■□□□□ 0.08
CNEP1R1-206ENST00000565556 CEP164Q9UPV0 1460 aa15.53■□□□□ 0.08
CNEP1R1-206ENST00000565556 BIVM-ERCC5R4GMW8 1640 aa15.52■□□□□ 0.08
CNEP1R1-206ENST00000565556 CUX1P39880 1505 aa15.5■□□□□ 0.07
CNEP1R1-206ENST00000565556 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
CNEP1R1-206ENST00000565556 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
CNEP1R1-206ENST00000565556 TOPBP1Q92547 1522 aa15.41■□□□□ 0.06
CNEP1R1-206ENST00000565556 URB2Q14146 1524 aaKnown RBP15.39■□□□□ 0.05
CNEP1R1-206ENST00000565556 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
CNEP1R1-206ENST00000565556 MRC2Q9UBG0 1479 aa15.38■□□□□ 0.05
CNEP1R1-206ENST00000565556 EEA1Q15075 1411 aa15.37■□□□□ 0.05
CNEP1R1-206ENST00000565556 FGD5Q6ZNL6 1462 aa15.35■□□□□ 0.05
CNEP1R1-206ENST00000565556 SOGA1O94964 1423 aa15.33■□□□□ 0.04
CNEP1R1-206ENST00000565556 FAM9AQ8IZU1 332 aaPredicted RBP15.31■□□□□ 0.04
CNEP1R1-206ENST00000565556 POLA1P09884 1462 aaPredicted RBP15.31■□□□□ 0.04
CNEP1R1-206ENST00000565556 WDR62O43379 1518 aa15.3■□□□□ 0.04
CNEP1R1-206ENST00000565556 THOC2Q8NI27 1593 aaKnown RBP15.27■□□□□ 0.03
CNEP1R1-206ENST00000565556 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
CNEP1R1-206ENST00000565556 KIF27Q86VH2 1401 aa15.26■□□□□ 0.03
CNEP1R1-206ENST00000565556 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
CNEP1R1-206ENST00000565556 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
CNEP1R1-206ENST00000565556 CUX2O14529 1486 aa15.23■□□□□ 0.03
CNEP1R1-206ENST00000565556 RAD54L2Q9Y4B4 1467 aa15.23■□□□□ 0.03
CNEP1R1-206ENST00000565556 WDR97A6NE52 1622 aa15.21■□□□□ 0.02
CNEP1R1-206ENST00000565556 TARBP1Q13395 1621 aaKnown RBP15.19■□□□□ 0.02
CNEP1R1-206ENST00000565556 LOC105371045A0A1W2PR82 267 aa15.18■□□□□ 0.02
CNEP1R1-206ENST00000565556 IFT140Q96RY7 1462 aa15.17■□□□□ 0.02
CNEP1R1-206ENST00000565556 KIF21BO75037 1637 aa15.15■□□□□ 0.02
CNEP1R1-206ENST00000565556 ABCA5Q8WWZ7 1642 aa15.12■□□□□ 0.01
CNEP1R1-206ENST00000565556 IGF1RP08069 1367 aa15.12■□□□□ 0.01
CNEP1R1-206ENST00000565556 GOLGA3Q08378 1498 aa15.11■□□□□ 0.01
CNEP1R1-206ENST00000565556 TDRD9Q8NDG6 1382 aaKnown RBP15.11■□□□□ 0.01
CNEP1R1-206ENST00000565556 GAPVD1Q14C86 1478 aa15.1■□□□□ 0.01
CNEP1R1-206ENST00000565556 PRXQ9BXM0 1461 aa15.1■□□□□ 0.01
CNEP1R1-206ENST00000565556 HRCP23327 699 aa15.09■□□□□ 0.01
CNEP1R1-206ENST00000565556 ERICH3Q5RHP9 1530 aa15.08■□□□□ 0.01
CNEP1R1-206ENST00000565556 CUL7Q14999 1698 aa15.06■□□□□ 0
CNEP1R1-206ENST00000565556 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
CNEP1R1-206ENST00000565556 CARMIL1Q5VZK9 1371 aa15.05■□□□□ -0
CNEP1R1-206ENST00000565556 PBRM1Q86U86 1689 aa15.04■□□□□ -0
CNEP1R1-206ENST00000565556 UBTFP17480 764 aaKnown RBP15.03■□□□□ -0
CNEP1R1-206ENST00000565556 AQRO60306 1485 aaKnown RBP eCLIP15.03■□□□□ -0
CNEP1R1-206ENST00000565556 RAPGEF2Q9Y4G8 1499 aa15.03■□□□□ -0
CNEP1R1-206ENST00000565556 TNIKQ9UKE5 1360 aa15.03■□□□□ -0
CNEP1R1-206ENST00000565556 ZNF608Q9ULD9 1512 aaPredicted RBP15.03■□□□□ -0
CNEP1R1-206ENST00000565556 GRIN2BQ13224 1484 aa15.03■□□□□ -0
CNEP1R1-206ENST00000565556 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
CNEP1R1-206ENST00000565556 FHAD1B1AJZ9 1412 aa14.95□□□□□ -0.02
CNEP1R1-206ENST00000565556 ADAMTS12P58397 1594 aa14.93□□□□□ -0.02
CNEP1R1-206ENST00000565556 MAGI1Q96QZ7 1491 aaPredicted RBP14.92□□□□□ -0.02
CNEP1R1-206ENST00000565556 CEP162Q5TB80 1403 aa14.91□□□□□ -0.02
CNEP1R1-206ENST00000565556 SNAPC4Q5SXM2 1469 aa14.91□□□□□ -0.02
CNEP1R1-206ENST00000565556 CTTNBP2Q8WZ74 1663 aa14.86□□□□□ -0.03
CNEP1R1-206ENST00000565556 PHF23Q9BUL5 403 aaPredicted RBP14.86□□□□□ -0.03
CNEP1R1-206ENST00000565556 SYNJ2O15056 1496 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms