RNA–Protein interactions for RNA: ENST00000565457.5

CNEP1R1-205, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5

Gene CNEP1R1, Length 1,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-205ENST00000565457 NISCHQ9Y2I1 1504 aa25.11■■□□□ 1.61
CNEP1R1-205ENST00000565457 CCDC180Q9P1Z9 1646 aa22.25■■□□□ 1.15
CNEP1R1-205ENST00000565457 ABCC9O60706 1549 aa21.93■■□□□ 1.1
CNEP1R1-205ENST00000565457 AEBP2Q6ZN18 517 aaPredicted RBP21.66■■□□□ 1.06
CNEP1R1-205ENST00000565457 CHIC1Q5VXU3 224 aa21.12■□□□□ 0.97
CNEP1R1-205ENST00000565457 DCAF8L2P0C7V8 631 aa21.1■□□□□ 0.97
CNEP1R1-205ENST00000565457 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
CNEP1R1-205ENST00000565457 NACADO15069 1562 aa20.95■□□□□ 0.94
CNEP1R1-205ENST00000565457 ZCCHC6Q5VYS8 1495 aaKnown RBP20.91■□□□□ 0.94
CNEP1R1-205ENST00000565457 MYO15BQ96JP2 1530 aa20.79■□□□□ 0.92
CNEP1R1-205ENST00000565457 DCAF1Q9Y4B6 1507 aa20.71■□□□□ 0.91
CNEP1R1-205ENST00000565457 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.88
CNEP1R1-205ENST00000565457 UNC13AQ9UPW8 1703 aa20.51■□□□□ 0.87
CNEP1R1-205ENST00000565457 SCRIBQ14160 1630 aa20.41■□□□□ 0.86
CNEP1R1-205ENST00000565457 BICRAQ9NZM4 1560 aa20.4■□□□□ 0.86
CNEP1R1-205ENST00000565457 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
CNEP1R1-205ENST00000565457 SHROOM4Q9ULL8 1493 aa20.08■□□□□ 0.81
CNEP1R1-205ENST00000565457 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
CNEP1R1-205ENST00000565457 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
CNEP1R1-205ENST00000565457 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
CNEP1R1-205ENST00000565457 SMARCA4P51532 1647 aa19.48■□□□□ 0.71
CNEP1R1-205ENST00000565457 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
CNEP1R1-205ENST00000565457 ATAD2BQ9ULI0 1458 aa19.4■□□□□ 0.7
CNEP1R1-205ENST00000565457 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
CNEP1R1-205ENST00000565457 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
CNEP1R1-205ENST00000565457 SMARCA2P51531 1590 aa19.33■□□□□ 0.68
CNEP1R1-205ENST00000565457 PEG3Q9GZU2 1588 aa19.25■□□□□ 0.67
CNEP1R1-205ENST00000565457 BAZ1BQ9UIG0 1483 aaKnown RBP19.24■□□□□ 0.67
CNEP1R1-205ENST00000565457 HMGXB3Q12766 1538 aa19.24■□□□□ 0.67
CNEP1R1-205ENST00000565457 WIZO95785 1651 aa19.17■□□□□ 0.66
CNEP1R1-205ENST00000565457 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
CNEP1R1-205ENST00000565457 NESP48681 1621 aa18.99■□□□□ 0.63
CNEP1R1-205ENST00000565457 TOP2AP11388 1531 aaKnown RBP18.93■□□□□ 0.62
CNEP1R1-205ENST00000565457 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
CNEP1R1-205ENST00000565457 CADPSQ9ULU8 1353 aa18.83■□□□□ 0.6
CNEP1R1-205ENST00000565457 LAMC3Q9Y6N6 1575 aa18.82■□□□□ 0.6
CNEP1R1-205ENST00000565457 CCDC88BA6NC98 1476 aa18.76■□□□□ 0.59
CNEP1R1-205ENST00000565457 SUPT5HO00267 1087 aaKnown RBP18.75■□□□□ 0.59
CNEP1R1-205ENST00000565457 PDS5BQ9NTI5 1447 aa18.73■□□□□ 0.59
CNEP1R1-205ENST00000565457 CFTRP13569 1480 aa18.7■□□□□ 0.58
CNEP1R1-205ENST00000565457 KIF21AQ7Z4S6 1674 aa18.68■□□□□ 0.58
CNEP1R1-205ENST00000565457 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
CNEP1R1-205ENST00000565457 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
CNEP1R1-205ENST00000565457 POTEDQ86YR6 584 aa18.62■□□□□ 0.57
CNEP1R1-205ENST00000565457 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
CNEP1R1-205ENST00000565457 CUX2O14529 1486 aa18.61■□□□□ 0.57
CNEP1R1-205ENST00000565457 CEP164Q9UPV0 1460 aa18.57■□□□□ 0.56
CNEP1R1-205ENST00000565457 MRC2Q9UBG0 1479 aa18.55■□□□□ 0.56
CNEP1R1-205ENST00000565457 SENP3Q9H4L4 574 aaPredicted RBP18.54■□□□□ 0.56
CNEP1R1-205ENST00000565457 WDR62O43379 1518 aa18.48■□□□□ 0.55
CNEP1R1-205ENST00000565457 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
CNEP1R1-205ENST00000565457 URB2Q14146 1524 aaKnown RBP18.45■□□□□ 0.54
CNEP1R1-205ENST00000565457 TOPBP1Q92547 1522 aa18.31■□□□□ 0.52
CNEP1R1-205ENST00000565457 DNMBPQ6XZF7 1577 aa18.26■□□□□ 0.51
CNEP1R1-205ENST00000565457 ABCC8Q09428 1581 aa18.24■□□□□ 0.51
CNEP1R1-205ENST00000565457 CUX1P39880 1505 aa18.19■□□□□ 0.5
CNEP1R1-205ENST00000565457 IFT140Q96RY7 1462 aa18.18■□□□□ 0.5
CNEP1R1-205ENST00000565457 POLA1P09884 1462 aaPredicted RBP18.16■□□□□ 0.5
CNEP1R1-205ENST00000565457 ZNF608Q9ULD9 1512 aaPredicted RBP18.16■□□□□ 0.5
CNEP1R1-205ENST00000565457 FGD5Q6ZNL6 1462 aa18.13■□□□□ 0.49
CNEP1R1-205ENST00000565457 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
CNEP1R1-205ENST00000565457 DNAJC5Q9H3Z4 198 aa18.12■□□□□ 0.49
CNEP1R1-205ENST00000565457 TARBP1Q13395 1621 aaKnown RBP18.1■□□□□ 0.49
CNEP1R1-205ENST00000565457 SOGA1O94964 1423 aa18.09■□□□□ 0.49
CNEP1R1-205ENST00000565457 AQRO60306 1485 aaKnown RBP eCLIP18.06■□□□□ 0.488e-7■■■□□ 16.1
CNEP1R1-205ENST00000565457 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
CNEP1R1-205ENST00000565457 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
CNEP1R1-205ENST00000565457 EIF4G3O43432 1585 aaKnown RBP18.03■□□□□ 0.48
CNEP1R1-205ENST00000565457 SYNJ1O43426 1573 aa18.03■□□□□ 0.48
CNEP1R1-205ENST00000565457 TOP2BQ02880 1626 aa17.99■□□□□ 0.47
CNEP1R1-205ENST00000565457 BIVM-ERCC5R4GMW8 1640 aa17.96■□□□□ 0.47
CNEP1R1-205ENST00000565457 ABCA10Q8WWZ4 1543 aa17.91■□□□□ 0.46
CNEP1R1-205ENST00000565457 WDR97A6NE52 1622 aa17.91■□□□□ 0.46
CNEP1R1-205ENST00000565457 OSCARQ8IYS5 282 aa17.9■□□□□ 0.46
CNEP1R1-205ENST00000565457 FBLN2P98095 1184 aa17.87■□□□□ 0.45
CNEP1R1-205ENST00000565457 GAPVD1Q14C86 1478 aa17.87■□□□□ 0.45
CNEP1R1-205ENST00000565457 GRIN2BQ13224 1484 aa17.86■□□□□ 0.45
CNEP1R1-205ENST00000565457 SNAPC4Q5SXM2 1469 aa17.86■□□□□ 0.45
CNEP1R1-205ENST00000565457 ABCA5Q8WWZ7 1642 aa17.84■□□□□ 0.45
CNEP1R1-205ENST00000565457 MAGI1Q96QZ7 1491 aaPredicted RBP17.79■□□□□ 0.44
CNEP1R1-205ENST00000565457 CHD1O14646 1710 aa17.79■□□□□ 0.44
CNEP1R1-205ENST00000565457 PBRM1Q86U86 1689 aa17.79■□□□□ 0.44
CNEP1R1-205ENST00000565457 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
CNEP1R1-205ENST00000565457 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
CNEP1R1-205ENST00000565457 ADAMTS12P58397 1594 aa17.68■□□□□ 0.42
CNEP1R1-205ENST00000565457 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
CNEP1R1-205ENST00000565457 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
CNEP1R1-205ENST00000565457 KIF27Q86VH2 1401 aa17.66■□□□□ 0.42
CNEP1R1-205ENST00000565457 FHAD1B1AJZ9 1412 aa17.66■□□□□ 0.42
CNEP1R1-205ENST00000565457 GRIN2AQ12879 1464 aa17.64■□□□□ 0.41
CNEP1R1-205ENST00000565457 IGF1RP08069 1367 aa17.63■□□□□ 0.41
CNEP1R1-205ENST00000565457 CLASP1Q7Z460 1538 aa17.61■□□□□ 0.41
CNEP1R1-205ENST00000565457 ARHGEF11O15085 1522 aa17.6■□□□□ 0.41
CNEP1R1-205ENST00000565457 RIMBP3CA6NJZ7 1639 aa17.6■□□□□ 0.41
CNEP1R1-205ENST00000565457 RIMBP3BA6NNM3 1639 aa17.6■□□□□ 0.41
CNEP1R1-205ENST00000565457 RIMBP3Q9UFD9 1639 aa17.6■□□□□ 0.41
CNEP1R1-205ENST00000565457 RUSC2Q8N2Y8 1516 aa17.59■□□□□ 0.41
CNEP1R1-205ENST00000565457 CEP170Q5SW79 1584 aa17.56■□□□□ 0.4
CNEP1R1-205ENST00000565457 NUP160Q12769 1436 aa17.55■□□□□ 0.4
CNEP1R1-205ENST00000565457 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms