RNA–Protein interactions for RNA: ENST00000565349.1

IMP3-203, Transcript of IMP3, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 4

Gene IMP3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP3-203ENST00000565349 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.78
IMP3-203ENST00000565349 ABCC9O60706 1549 aa23.7■■□□□ 1.38
IMP3-203ENST00000565349 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
IMP3-203ENST00000565349 RB1CC1Q8TDY2 1594 aa22.53■■□□□ 1.2
IMP3-203ENST00000565349 DNAJC5BQ9UF47 199 aa22.34■■□□□ 1.17
IMP3-203ENST00000565349 NACADO15069 1562 aa22.33■■□□□ 1.16
IMP3-203ENST00000565349 UNC13AQ9UPW8 1703 aa22.15■■□□□ 1.14
IMP3-203ENST00000565349 MYO15BQ96JP2 1530 aa21.96■■□□□ 1.11
IMP3-203ENST00000565349 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
IMP3-203ENST00000565349 PABPN1Q86U42 306 aaKnown RBP eCLIP21.94■■□□□ 1.1
IMP3-203ENST00000565349 BICRAQ9NZM4 1560 aa21.91■■□□□ 1.1
IMP3-203ENST00000565349 ZCCHC6Q5VYS8 1495 aaKnown RBP21.66■■□□□ 1.06
IMP3-203ENST00000565349 DCAF1Q9Y4B6 1507 aa21.62■■□□□ 1.05
IMP3-203ENST00000565349 SHROOM4Q9ULL8 1493 aa21.59■■□□□ 1.05
IMP3-203ENST00000565349 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
IMP3-203ENST00000565349 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
IMP3-203ENST00000565349 EIF4G1Q04637 1599 aaKnown RBP21.37■■□□□ 1.01
IMP3-203ENST00000565349 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
IMP3-203ENST00000565349 DNAJC5Q9H3Z4 198 aa20.64■□□□□ 0.89
IMP3-203ENST00000565349 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
IMP3-203ENST00000565349 CUX2O14529 1486 aa20.54■□□□□ 0.88
IMP3-203ENST00000565349 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
IMP3-203ENST00000565349 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
IMP3-203ENST00000565349 HMGXB3Q12766 1538 aa20.47■□□□□ 0.87
IMP3-203ENST00000565349 ERCC6Q03468 1493 aa20.46■□□□□ 0.87
IMP3-203ENST00000565349 SMARCA2P51531 1590 aa20.45■□□□□ 0.86
IMP3-203ENST00000565349 NESP48681 1621 aa20.32■□□□□ 0.84
IMP3-203ENST00000565349 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
IMP3-203ENST00000565349 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
IMP3-203ENST00000565349 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
IMP3-203ENST00000565349 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
IMP3-203ENST00000565349 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
IMP3-203ENST00000565349 KIF21AQ7Z4S6 1674 aa20.16■□□□□ 0.82
IMP3-203ENST00000565349 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.81
IMP3-203ENST00000565349 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
IMP3-203ENST00000565349 WIZO95785 1651 aa19.93■□□□□ 0.78
IMP3-203ENST00000565349 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
IMP3-203ENST00000565349 WDR62O43379 1518 aa19.89■□□□□ 0.77
IMP3-203ENST00000565349 MRC2Q9UBG0 1479 aa19.89■□□□□ 0.77
IMP3-203ENST00000565349 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
IMP3-203ENST00000565349 FANCD2Q9BXW9 1451 aa19.72■□□□□ 0.75
IMP3-203ENST00000565349 CFTRP13569 1480 aa19.67■□□□□ 0.74
IMP3-203ENST00000565349 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
IMP3-203ENST00000565349 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
IMP3-203ENST00000565349 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
IMP3-203ENST00000565349 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
IMP3-203ENST00000565349 URB2Q14146 1524 aaKnown RBP19.59■□□□□ 0.73
IMP3-203ENST00000565349 OSCARQ8IYS5 282 aa19.44■□□□□ 0.7
IMP3-203ENST00000565349 RIMBP3CA6NJZ7 1639 aa19.38■□□□□ 0.69
IMP3-203ENST00000565349 RIMBP3BA6NNM3 1639 aa19.38■□□□□ 0.69
IMP3-203ENST00000565349 RIMBP3Q9UFD9 1639 aa19.38■□□□□ 0.69
IMP3-203ENST00000565349 CCDC88BA6NC98 1476 aa19.37■□□□□ 0.69
IMP3-203ENST00000565349 ZNF608Q9ULD9 1512 aaPredicted RBP19.36■□□□□ 0.69
IMP3-203ENST00000565349 IFT140Q96RY7 1462 aa19.36■□□□□ 0.69
IMP3-203ENST00000565349 TOPBP1Q92547 1522 aa19.34■□□□□ 0.69
IMP3-203ENST00000565349 EIF4G3O43432 1585 aaKnown RBP19.32■□□□□ 0.68
IMP3-203ENST00000565349 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
IMP3-203ENST00000565349 ARHGEF11O15085 1522 aa19.26■□□□□ 0.67
IMP3-203ENST00000565349 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
IMP3-203ENST00000565349 CHD1O14646 1710 aa19.25■□□□□ 0.67
IMP3-203ENST00000565349 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
IMP3-203ENST00000565349 POLA1P09884 1462 aaPredicted RBP19.13■□□□□ 0.65
IMP3-203ENST00000565349 AQRO60306 1485 aaKnown RBP eCLIP19.11■□□□□ 0.65
IMP3-203ENST00000565349 ARAP1Q96P48 1450 aa19.06■□□□□ 0.64
IMP3-203ENST00000565349 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
IMP3-203ENST00000565349 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
IMP3-203ENST00000565349 CYB5RLQ6IPT4 315 aa18.99■□□□□ 0.63
IMP3-203ENST00000565349 CLASP1Q7Z460 1538 aa18.98■□□□□ 0.63
IMP3-203ENST00000565349 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
IMP3-203ENST00000565349 SOGA1O94964 1423 aa18.97■□□□□ 0.63
IMP3-203ENST00000565349 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
IMP3-203ENST00000565349 CUX1P39880 1505 aa18.95■□□□□ 0.62
IMP3-203ENST00000565349 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
IMP3-203ENST00000565349 FBLN2P98095 1184 aa18.93■□□□□ 0.62
IMP3-203ENST00000565349 SYNJ1O43426 1573 aa18.92■□□□□ 0.62
IMP3-203ENST00000565349 MAGI1Q96QZ7 1491 aaPredicted RBP18.91■□□□□ 0.62
IMP3-203ENST00000565349 PBRM1Q86U86 1689 aa18.91■□□□□ 0.62
IMP3-203ENST00000565349 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
IMP3-203ENST00000565349 SYNJ2O15056 1496 aa18.84■□□□□ 0.61
IMP3-203ENST00000565349 TRHP20396 242 aaPredicted RBP18.82■□□□□ 0.6
IMP3-203ENST00000565349 ABCA5Q8WWZ7 1642 aa18.82■□□□□ 0.6
IMP3-203ENST00000565349 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
IMP3-203ENST00000565349 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.59
IMP3-203ENST00000565349 ABCA10Q8WWZ4 1543 aa18.75■□□□□ 0.59
IMP3-203ENST00000565349 ADAMTS12P58397 1594 aa18.68■□□□□ 0.58
IMP3-203ENST00000565349 BIVM-ERCC5R4GMW8 1640 aa18.66■□□□□ 0.58
IMP3-203ENST00000565349 GRIN2AQ12879 1464 aa18.65■□□□□ 0.58
IMP3-203ENST00000565349 ERCC6L2Q5T890 1561 aa18.64■□□□□ 0.58
IMP3-203ENST00000565349 CEP170Q5SW79 1584 aa18.63■□□□□ 0.57
IMP3-203ENST00000565349 TOP2BQ02880 1626 aa18.61■□□□□ 0.57
IMP3-203ENST00000565349 SHROOM2Q13796 1616 aa18.61■□□□□ 0.57
IMP3-203ENST00000565349 NUP160Q12769 1436 aa18.6■□□□□ 0.57
IMP3-203ENST00000565349 WRNQ14191 1432 aaPredicted RBP eCLIP18.58■□□□□ 0.57
IMP3-203ENST00000565349 ERICH3Q5RHP9 1530 aa18.53■□□□□ 0.56
IMP3-203ENST00000565349 FHAD1B1AJZ9 1412 aa18.52■□□□□ 0.56
IMP3-203ENST00000565349 KIF13AQ9H1H9 1805 aa18.49■□□□□ 0.55
IMP3-203ENST00000565349 SUPT5HO00267 1087 aaKnown RBP18.48■□□□□ 0.55
IMP3-203ENST00000565349 RUSC2Q8N2Y8 1516 aa18.43■□□□□ 0.54
IMP3-203ENST00000565349 AEBP2Q6ZN18 517 aaPredicted RBP18.41■□□□□ 0.54
IMP3-203ENST00000565349 PRG4Q92954 1404 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms