RNA–Protein interactions for RNA: ENST00000565317.1

PML-214, Transcript of promyelocytic leukemia, humanhuman

TSL 3

Gene PML, Length 596 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-214ENST00000565317 NISCHQ9Y2I1 1504 aa29.18■■■□□ 2.26
PML-214ENST00000565317 ABCC9O60706 1549 aa26.6■■□□□ 1.85
PML-214ENST00000565317 CCDC180Q9P1Z9 1646 aa26.16■■□□□ 1.78
PML-214ENST00000565317 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
PML-214ENST00000565317 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
PML-214ENST00000565317 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
PML-214ENST00000565317 NACADO15069 1562 aa24.81■■□□□ 1.56
PML-214ENST00000565317 PABPN1Q86U42 306 aaKnown RBP eCLIP24.8■■□□□ 1.56
PML-214ENST00000565317 UNC13AQ9UPW8 1703 aa24.59■■□□□ 1.53
PML-214ENST00000565317 BICRAQ9NZM4 1560 aa24.47■■□□□ 1.51
PML-214ENST00000565317 MYO15BQ96JP2 1530 aa24.34■■□□□ 1.49
PML-214ENST00000565317 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
PML-214ENST00000565317 SCRIBQ14160 1630 aa23.98■■□□□ 1.43
PML-214ENST00000565317 DCAF1Q9Y4B6 1507 aa23.97■■□□□ 1.43
PML-214ENST00000565317 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.43
PML-214ENST00000565317 CECR2Q9BXF3 1484 aa23.92■■□□□ 1.42
PML-214ENST00000565317 SHROOM4Q9ULL8 1493 aa23.85■■□□□ 1.41
PML-214ENST00000565317 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
PML-214ENST00000565317 DNAJC5Q9H3Z4 198 aa23.25■■□□□ 1.31
PML-214ENST00000565317 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
PML-214ENST00000565317 ATAD2BQ9ULI0 1458 aa22.9■■□□□ 1.26
PML-214ENST00000565317 ERCC6Q03468 1493 aa22.87■■□□□ 1.25
PML-214ENST00000565317 CUX2O14529 1486 aa22.85■■□□□ 1.25
PML-214ENST00000565317 NESP48681 1621 aa22.82■■□□□ 1.24
PML-214ENST00000565317 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
PML-214ENST00000565317 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
PML-214ENST00000565317 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
PML-214ENST00000565317 BAZ1BQ9UIG0 1483 aaKnown RBP22.62■■□□□ 1.21
PML-214ENST00000565317 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
PML-214ENST00000565317 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
PML-214ENST00000565317 THOC2Q8NI27 1593 aaKnown RBP22.52■■□□□ 1.2
PML-214ENST00000565317 PEG3Q9GZU2 1588 aa22.51■■□□□ 1.19
PML-214ENST00000565317 KIF21AQ7Z4S6 1674 aa22.43■■□□□ 1.18
PML-214ENST00000565317 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
PML-214ENST00000565317 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
PML-214ENST00000565317 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
PML-214ENST00000565317 WIZO95785 1651 aa22.27■■□□□ 1.16
PML-214ENST00000565317 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
PML-214ENST00000565317 MRC2Q9UBG0 1479 aa22.18■■□□□ 1.14
PML-214ENST00000565317 WDR62O43379 1518 aa22.12■■□□□ 1.13
PML-214ENST00000565317 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
PML-214ENST00000565317 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
PML-214ENST00000565317 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
PML-214ENST00000565317 CFTRP13569 1480 aa21.96■■□□□ 1.11
PML-214ENST00000565317 URB2Q14146 1524 aaKnown RBP21.91■■□□□ 1.1
PML-214ENST00000565317 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
PML-214ENST00000565317 OSCARQ8IYS5 282 aa21.86■■□□□ 1.09
PML-214ENST00000565317 ZNF608Q9ULD9 1512 aaPredicted RBP21.72■■□□□ 1.07
PML-214ENST00000565317 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
PML-214ENST00000565317 PRDM2Q13029 1718 aa21.64■■□□□ 1.06
PML-214ENST00000565317 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
PML-214ENST00000565317 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
PML-214ENST00000565317 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
PML-214ENST00000565317 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
PML-214ENST00000565317 IFT140Q96RY7 1462 aa21.59■■□□□ 1.05
PML-214ENST00000565317 ARHGEF11O15085 1522 aa21.51■■□□□ 1.03
PML-214ENST00000565317 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.03
PML-214ENST00000565317 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
PML-214ENST00000565317 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.02
PML-214ENST00000565317 CYB5RLQ6IPT4 315 aa21.45■■□□□ 1.02
PML-214ENST00000565317 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
PML-214ENST00000565317 CHD1O14646 1710 aa21.41■■□□□ 1.02
PML-214ENST00000565317 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
PML-214ENST00000565317 FBLN2P98095 1184 aa21.39■■□□□ 1.01
PML-214ENST00000565317 RAD54L2Q9Y4B4 1467 aa21.38■■□□□ 1.01
PML-214ENST00000565317 POLA1P09884 1462 aaPredicted RBP21.37■■□□□ 1.01
PML-214ENST00000565317 TDRD9Q8NDG6 1382 aaKnown RBP21.33■■□□□ 1
PML-214ENST00000565317 ARAP1Q96P48 1450 aa21.32■■□□□ 1
PML-214ENST00000565317 SOGA1O94964 1423 aa21.28■■□□□ 1
PML-214ENST00000565317 TRHP20396 242 aaPredicted RBP21.25■□□□□ 0.99
PML-214ENST00000565317 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
PML-214ENST00000565317 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
PML-214ENST00000565317 CUX1P39880 1505 aa21.18■□□□□ 0.98
PML-214ENST00000565317 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
PML-214ENST00000565317 CLASP1Q7Z460 1538 aa21.13■□□□□ 0.97
PML-214ENST00000565317 GRIN2BQ13224 1484 aa21.06■□□□□ 0.96
PML-214ENST00000565317 MAGI1Q96QZ7 1491 aaPredicted RBP21.04■□□□□ 0.96
PML-214ENST00000565317 SYNJ1O43426 1573 aa21.03■□□□□ 0.96
PML-214ENST00000565317 WDR97A6NE52 1622 aa21.03■□□□□ 0.96
PML-214ENST00000565317 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
PML-214ENST00000565317 GAPVD1Q14C86 1478 aa20.98■□□□□ 0.95
PML-214ENST00000565317 PBRM1Q86U86 1689 aa20.97■□□□□ 0.95
PML-214ENST00000565317 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
PML-214ENST00000565317 ERCC6L2Q5T890 1561 aa20.92■□□□□ 0.94
PML-214ENST00000565317 ABCA5Q8WWZ7 1642 aa20.9■□□□□ 0.94
PML-214ENST00000565317 ABCA10Q8WWZ4 1543 aa20.9■□□□□ 0.94
PML-214ENST00000565317 GRIN2AQ12879 1464 aa20.81■□□□□ 0.92
PML-214ENST00000565317 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
PML-214ENST00000565317 WRNQ14191 1432 aaPredicted RBP eCLIP20.76■□□□□ 0.91
PML-214ENST00000565317 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
PML-214ENST00000565317 NUP160Q12769 1436 aa20.75■□□□□ 0.91
PML-214ENST00000565317 AEBP2Q6ZN18 517 aaPredicted RBP20.74■□□□□ 0.91
PML-214ENST00000565317 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
PML-214ENST00000565317 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
PML-214ENST00000565317 FHAD1B1AJZ9 1412 aa20.69■□□□□ 0.9
PML-214ENST00000565317 SHROOM2Q13796 1616 aa20.67■□□□□ 0.9
PML-214ENST00000565317 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
PML-214ENST00000565317 ERICH3Q5RHP9 1530 aa20.6■□□□□ 0.89
PML-214ENST00000565317 JPH4Q96JJ6 628 aa20.59■□□□□ 0.89
PML-214ENST00000565317 KIF13AQ9H1H9 1805 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms