RNA–Protein interactions for RNA: ENST00000565239.5

PML-213, Transcript of promyelocytic leukemia, humanhuman

TSL 3

Gene PML, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-213ENST00000565239 NISCHQ9Y2I1 1504 aa40.25■■■■■ 4.03
PML-213ENST00000565239 ABCC9O60706 1549 aa36.38■■■■□ 3.41
PML-213ENST00000565239 CCDC180Q9P1Z9 1646 aa36.31■■■■□ 3.4
PML-213ENST00000565239 RB1CC1Q8TDY2 1594 aa34.59■■■■□ 3.13
PML-213ENST00000565239 NACADO15069 1562 aa34.28■■■■□ 3.08
PML-213ENST00000565239 DNAJC5BQ9UF47 199 aa34.18■■■■□ 3.06
PML-213ENST00000565239 DCAF8L2P0C7V8 631 aa34■■■■□ 3.03
PML-213ENST00000565239 UNC13AQ9UPW8 1703 aa33.96■■■■□ 3.03
PML-213ENST00000565239 PABPN1Q86U42 306 aaKnown RBP eCLIP33.77■■■■□ 3
PML-213ENST00000565239 MYO15BQ96JP2 1530 aa33.71■■■□□ 2.99
PML-213ENST00000565239 BICRAQ9NZM4 1560 aa33.59■■■□□ 2.97
PML-213ENST00000565239 ZCCHC6Q5VYS8 1495 aaKnown RBP33.33■■■□□ 2.93
PML-213ENST00000565239 DCAF1Q9Y4B6 1507 aa33.23■■■□□ 2.91
PML-213ENST00000565239 SHROOM4Q9ULL8 1493 aa33.07■■■□□ 2.88
PML-213ENST00000565239 SCRIBQ14160 1630 aa33.06■■■□□ 2.88
PML-213ENST00000565239 CC2D2AQ9P2K1 1620 aa32.91■■■□□ 2.86
PML-213ENST00000565239 EIF4G1Q04637 1599 aaKnown RBP32.78■■■□□ 2.84
PML-213ENST00000565239 CECR2Q9BXF3 1484 aa32.77■■■□□ 2.84
PML-213ENST00000565239 NCAPD3P42695 1498 aa31.59■■■□□ 2.65
PML-213ENST00000565239 DNAJC5Q9H3Z4 198 aa31.52■■■□□ 2.64
PML-213ENST00000565239 SMARCA4P51532 1647 aa31.5■■■□□ 2.63
PML-213ENST00000565239 ATAD2BQ9ULI0 1458 aa31.49■■■□□ 2.63
PML-213ENST00000565239 SMARCA2P51531 1590 aa31.44■■■□□ 2.62
PML-213ENST00000565239 ERCC6Q03468 1493 aa31.43■■■□□ 2.62
PML-213ENST00000565239 CUX2O14529 1486 aa31.42■■■□□ 2.62
PML-213ENST00000565239 HMGXB3Q12766 1538 aa31.42■■■□□ 2.62
PML-213ENST00000565239 BAZ1AQ9NRL2 1556 aaPredicted RBP31.29■■■□□ 2.6
PML-213ENST00000565239 BAZ1BQ9UIG0 1483 aaKnown RBP31.21■■■□□ 2.59
PML-213ENST00000565239 NESP48681 1621 aa31.21■■■□□ 2.59
PML-213ENST00000565239 PEG3Q9GZU2 1588 aa31.16■■■□□ 2.58
PML-213ENST00000565239 MROH2BQ7Z745 1585 aa31.02■■■□□ 2.56
PML-213ENST00000565239 LAMC3Q9Y6N6 1575 aa31■■■□□ 2.55
PML-213ENST00000565239 THOC2Q8NI27 1593 aaKnown RBP31■■■□□ 2.55
PML-213ENST00000565239 KIF21AQ7Z4S6 1674 aa30.93■■■□□ 2.54
PML-213ENST00000565239 PDS5BQ9NTI5 1447 aa30.75■■■□□ 2.51
PML-213ENST00000565239 WIZO95785 1651 aa30.72■■■□□ 2.51
PML-213ENST00000565239 CADPSQ9ULU8 1353 aa30.62■■■□□ 2.49
PML-213ENST00000565239 MRC2Q9UBG0 1479 aa30.53■■■□□ 2.48
PML-213ENST00000565239 WDR62O43379 1518 aa30.48■■■□□ 2.47
PML-213ENST00000565239 CEP164Q9UPV0 1460 aa30.38■■■□□ 2.45
PML-213ENST00000565239 FANCD2Q9BXW9 1451 aa30.31■■■□□ 2.44
PML-213ENST00000565239 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
PML-213ENST00000565239 TOP2AP11388 1531 aaKnown RBP30.27■■■□□ 2.44
PML-213ENST00000565239 CFTRP13569 1480 aa30.25■■■□□ 2.43
PML-213ENST00000565239 PRDM2Q13029 1718 aa30.16■■■□□ 2.42
PML-213ENST00000565239 TRIM41Q8WV44 630 aa30.12■■■□□ 2.41
PML-213ENST00000565239 URB2Q14146 1524 aaKnown RBP30.09■■■□□ 2.41
PML-213ENST00000565239 OSCARQ8IYS5 282 aa29.89■■■□□ 2.38
PML-213ENST00000565239 CCDC88BA6NC98 1476 aa29.88■■■□□ 2.37
PML-213ENST00000565239 IFT140Q96RY7 1462 aa29.75■■■□□ 2.35
PML-213ENST00000565239 ZNF608Q9ULD9 1512 aaPredicted RBP29.74■■■□□ 2.35
PML-213ENST00000565239 TOPBP1Q92547 1522 aa29.73■■■□□ 2.35
PML-213ENST00000565239 RIMBP3CA6NJZ7 1639 aa29.67■■■□□ 2.34
PML-213ENST00000565239 RIMBP3BA6NNM3 1639 aa29.67■■■□□ 2.34
PML-213ENST00000565239 RIMBP3Q9UFD9 1639 aa29.67■■■□□ 2.34
PML-213ENST00000565239 EIF4G3O43432 1585 aaKnown RBP29.65■■■□□ 2.34
PML-213ENST00000565239 DNMBPQ6XZF7 1577 aa29.64■■■□□ 2.34
PML-213ENST00000565239 ABCC8Q09428 1581 aa29.64■■■□□ 2.33
PML-213ENST00000565239 TARBP1Q13395 1621 aaKnown RBP29.53■■■□□ 2.32
PML-213ENST00000565239 CHD1O14646 1710 aa29.52■■■□□ 2.32
PML-213ENST00000565239 ARHGEF11O15085 1522 aa29.5■■■□□ 2.31
PML-213ENST00000565239 AQRO60306 1485 aaKnown RBP eCLIP29.42■■■□□ 2.31e-6■■■■■ 29.8
PML-213ENST00000565239 POLA1P09884 1462 aaPredicted RBP29.42■■■□□ 2.3
PML-213ENST00000565239 RAD54L2Q9Y4B4 1467 aa29.3■■■□□ 2.28
PML-213ENST00000565239 FBLN2P98095 1184 aa29.25■■■□□ 2.27
PML-213ENST00000565239 SOGA1O94964 1423 aa29.24■■■□□ 2.27
PML-213ENST00000565239 WDR97A6NE52 1622 aa29.22■■■□□ 2.27
PML-213ENST00000565239 FGD5Q6ZNL6 1462 aa29.22■■■□□ 2.27
PML-213ENST00000565239 CYB5RLQ6IPT4 315 aa29.21■■■□□ 2.27
PML-213ENST00000565239 TDRD9Q8NDG6 1382 aaKnown RBP29.2■■■□□ 2.26
PML-213ENST00000565239 ARAP1Q96P48 1450 aa29.18■■■□□ 2.26
PML-213ENST00000565239 CUX1P39880 1505 aa29.17■■■□□ 2.26
PML-213ENST00000565239 SNAPC4Q5SXM2 1469 aa29.16■■■□□ 2.26
PML-213ENST00000565239 CLASP1Q7Z460 1538 aa29.08■■■□□ 2.25
PML-213ENST00000565239 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
PML-213ENST00000565239 SYNJ1O43426 1573 aa29.06■■■□□ 2.24
PML-213ENST00000565239 MAGI1Q96QZ7 1491 aaPredicted RBP29.06■■■□□ 2.24
PML-213ENST00000565239 GRIN2BQ13224 1484 aa29.03■■■□□ 2.24
PML-213ENST00000565239 CHMP7Q8WUX9 453 aaPredicted RBP29■■■□□ 2.23
PML-213ENST00000565239 TRHP20396 242 aaPredicted RBP28.98■■■□□ 2.23
PML-213ENST00000565239 SYNJ2O15056 1496 aa28.97■■■□□ 2.23
PML-213ENST00000565239 GAPVD1Q14C86 1478 aa28.91■■■□□ 2.22
PML-213ENST00000565239 ABCA5Q8WWZ7 1642 aa28.9■■■□□ 2.22
PML-213ENST00000565239 ABCA10Q8WWZ4 1543 aa28.85■■■□□ 2.21
PML-213ENST00000565239 SUPT5HO00267 1087 aaKnown RBP28.79■■■□□ 2.2
PML-213ENST00000565239 BIVM-ERCC5R4GMW8 1640 aa28.73■■■□□ 2.19
PML-213ENST00000565239 ADAMTS12P58397 1594 aa28.69■■■□□ 2.18
PML-213ENST00000565239 TOP2BQ02880 1626 aa28.69■■■□□ 2.18
PML-213ENST00000565239 WRNQ14191 1432 aaPredicted RBP eCLIP28.68■■■□□ 2.18
PML-213ENST00000565239 GRIN2AQ12879 1464 aa28.67■■■□□ 2.18
PML-213ENST00000565239 CEP170Q5SW79 1584 aa28.62■■■□□ 2.17
PML-213ENST00000565239 ERCC6L2Q5T890 1561 aa28.62■■■□□ 2.17
PML-213ENST00000565239 NUP160Q12769 1436 aa28.55■■■□□ 2.16
PML-213ENST00000565239 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
PML-213ENST00000565239 ERICH3Q5RHP9 1530 aa28.52■■■□□ 2.16
PML-213ENST00000565239 FHAD1B1AJZ9 1412 aa28.52■■■□□ 2.16
PML-213ENST00000565239 KIF13AQ9H1H9 1805 aa28.32■■■□□ 2.12
PML-213ENST00000565239 RUSC2Q8N2Y8 1516 aa28.3■■■□□ 2.12
PML-213ENST00000565239 PRG4Q92954 1404 aaPredicted RBP28.29■■■□□ 2.12
PML-213ENST00000565239 AEBP2Q6ZN18 517 aaPredicted RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms