RNA–Protein interactions for RNA: ENST00000565235.2

CDH16-203, Transcript of cadherin 16, humanhuman

TSL 3

Gene CDH16, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-203ENST00000565235 NISCHQ9Y2I1 1504 aa32.72■■■□□ 2.83
CDH16-203ENST00000565235 CCDC180Q9P1Z9 1646 aa29.18■■■□□ 2.26
CDH16-203ENST00000565235 ABCC9O60706 1549 aa28.88■■■□□ 2.21
CDH16-203ENST00000565235 RB1CC1Q8TDY2 1594 aa27.48■■□□□ 1.99
CDH16-203ENST00000565235 NACADO15069 1562 aa27.45■■□□□ 1.99
CDH16-203ENST00000565235 MYO15BQ96JP2 1530 aa27.37■■□□□ 1.97
CDH16-203ENST00000565235 DNAJC5BQ9UF47 199 aa27.28■■□□□ 1.96
CDH16-203ENST00000565235 ZCCHC6Q5VYS8 1495 aaKnown RBP27.27■■□□□ 1.96
CDH16-203ENST00000565235 DCAF8L2P0C7V8 631 aa27.24■■□□□ 1.95
CDH16-203ENST00000565235 DCAF1Q9Y4B6 1507 aa27.19■■□□□ 1.94
CDH16-203ENST00000565235 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
CDH16-203ENST00000565235 UNC13AQ9UPW8 1703 aa26.66■■□□□ 1.86
CDH16-203ENST00000565235 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
CDH16-203ENST00000565235 SHROOM4Q9ULL8 1493 aa26.53■■□□□ 1.84
CDH16-203ENST00000565235 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
CDH16-203ENST00000565235 CECR2Q9BXF3 1484 aa26.05■■□□□ 1.76
CDH16-203ENST00000565235 CC2D2AQ9P2K1 1620 aa25.94■■□□□ 1.74
CDH16-203ENST00000565235 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
CDH16-203ENST00000565235 BAZ1AQ9NRL2 1556 aaPredicted RBP25.41■■□□□ 1.66
CDH16-203ENST00000565235 SMARCA4P51532 1647 aa25.38■■□□□ 1.65
CDH16-203ENST00000565235 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
CDH16-203ENST00000565235 NCAPD3P42695 1498 aa25.32■■□□□ 1.64
CDH16-203ENST00000565235 SMARCA2P51531 1590 aa25.31■■□□□ 1.64
CDH16-203ENST00000565235 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
CDH16-203ENST00000565235 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
CDH16-203ENST00000565235 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
CDH16-203ENST00000565235 MROH2BQ7Z745 1585 aa25.14■■□□□ 1.61
CDH16-203ENST00000565235 ERCC6Q03468 1493 aa25.08■■□□□ 1.6
CDH16-203ENST00000565235 BAZ1BQ9UIG0 1483 aaKnown RBP25.08■■□□□ 1.6
CDH16-203ENST00000565235 CUX2O14529 1486 aa24.98■■□□□ 1.59
CDH16-203ENST00000565235 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
CDH16-203ENST00000565235 WIZO95785 1651 aa24.81■■□□□ 1.56
CDH16-203ENST00000565235 TOP2AP11388 1531 aaKnown RBP24.69■■□□□ 1.54
CDH16-203ENST00000565235 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
CDH16-203ENST00000565235 NESP48681 1621 aa24.64■■□□□ 1.53
CDH16-203ENST00000565235 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
CDH16-203ENST00000565235 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
CDH16-203ENST00000565235 CFTRP13569 1480 aa24.41■■□□□ 1.5
CDH16-203ENST00000565235 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
CDH16-203ENST00000565235 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
CDH16-203ENST00000565235 THOC2Q8NI27 1593 aaKnown RBP24.31■■□□□ 1.48
CDH16-203ENST00000565235 KIF21AQ7Z4S6 1674 aa24.28■■□□□ 1.48
CDH16-203ENST00000565235 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
CDH16-203ENST00000565235 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
CDH16-203ENST00000565235 MRC2Q9UBG0 1479 aa24.23■■□□□ 1.47
CDH16-203ENST00000565235 PRDM2Q13029 1718 aa24.15■■□□□ 1.46
CDH16-203ENST00000565235 WDR62O43379 1518 aa24.15■■□□□ 1.46
CDH16-203ENST00000565235 SUPT5HO00267 1087 aaKnown RBP24.05■■□□□ 1.44
CDH16-203ENST00000565235 OSCARQ8IYS5 282 aa23.99■■□□□ 1.43
CDH16-203ENST00000565235 URB2Q14146 1524 aaKnown RBP23.97■■□□□ 1.43
CDH16-203ENST00000565235 ABCC8Q09428 1581 aa23.95■■□□□ 1.43
CDH16-203ENST00000565235 DNMBPQ6XZF7 1577 aa23.84■■□□□ 1.41
CDH16-203ENST00000565235 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
CDH16-203ENST00000565235 IFT140Q96RY7 1462 aa23.76■■□□□ 1.39
CDH16-203ENST00000565235 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
CDH16-203ENST00000565235 CUX1P39880 1505 aa23.61■■□□□ 1.37
CDH16-203ENST00000565235 TARBP1Q13395 1621 aaKnown RBP23.58■■□□□ 1.36
CDH16-203ENST00000565235 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
CDH16-203ENST00000565235 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
CDH16-203ENST00000565235 ZNF608Q9ULD9 1512 aaPredicted RBP23.54■■□□□ 1.36
CDH16-203ENST00000565235 SOGA1O94964 1423 aa23.53■■□□□ 1.36
CDH16-203ENST00000565235 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
CDH16-203ENST00000565235 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
CDH16-203ENST00000565235 FBLN2P98095 1184 aa23.48■■□□□ 1.35
CDH16-203ENST00000565235 CYB5RLQ6IPT4 315 aa23.46■■□□□ 1.35
CDH16-203ENST00000565235 RAD54L2Q9Y4B4 1467 aa23.45■■□□□ 1.34
CDH16-203ENST00000565235 TOP2BQ02880 1626 aa23.44■■□□□ 1.34
CDH16-203ENST00000565235 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
CDH16-203ENST00000565235 TRHP20396 242 aaPredicted RBP23.41■■□□□ 1.34
CDH16-203ENST00000565235 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
CDH16-203ENST00000565235 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
CDH16-203ENST00000565235 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
CDH16-203ENST00000565235 AQRO60306 1485 aaKnown RBP eCLIP23.4■■□□□ 1.34
CDH16-203ENST00000565235 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
CDH16-203ENST00000565235 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
CDH16-203ENST00000565235 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
CDH16-203ENST00000565235 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
CDH16-203ENST00000565235 GRIN2BQ13224 1484 aa23.31■■□□□ 1.32
CDH16-203ENST00000565235 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
CDH16-203ENST00000565235 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
CDH16-203ENST00000565235 ABCA5Q8WWZ7 1642 aa23.27■■□□□ 1.32
CDH16-203ENST00000565235 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
CDH16-203ENST00000565235 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
CDH16-203ENST00000565235 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
CDH16-203ENST00000565235 PBRM1Q86U86 1689 aa23.17■■□□□ 1.3
CDH16-203ENST00000565235 CHD1O14646 1710 aa23.13■■□□□ 1.29
CDH16-203ENST00000565235 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
CDH16-203ENST00000565235 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
CDH16-203ENST00000565235 ADAMTS12P58397 1594 aa23.06■■□□□ 1.28
CDH16-203ENST00000565235 FHAD1B1AJZ9 1412 aa23.04■■□□□ 1.28
CDH16-203ENST00000565235 KIF27Q86VH2 1401 aa23.03■■□□□ 1.28
CDH16-203ENST00000565235 AEBP2Q6ZN18 517 aaPredicted RBP23■■□□□ 1.27
CDH16-203ENST00000565235 GRIN2AQ12879 1464 aa22.99■■□□□ 1.27
CDH16-203ENST00000565235 CLASP1Q7Z460 1538 aa22.99■■□□□ 1.27
CDH16-203ENST00000565235 NUP160Q12769 1436 aa22.91■■□□□ 1.26
CDH16-203ENST00000565235 CUL7Q14999 1698 aa22.9■■□□□ 1.26
CDH16-203ENST00000565235 IGF1RP08069 1367 aa22.88■■□□□ 1.25
CDH16-203ENST00000565235 CEP170Q5SW79 1584 aa22.83■■□□□ 1.25
CDH16-203ENST00000565235 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
CDH16-203ENST00000565235 SHROOM2Q13796 1616 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms