RNA–Protein interactions for RNA: ENST00000565221.5

PMM2-207, Transcript of phosphomannomutase 2, humanhuman

TSL 1 (best)

Gene PMM2, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-207ENST00000565221 NISCHQ9Y2I1 1504 aa32.74■■■□□ 2.83
PMM2-207ENST00000565221 ABCC9O60706 1549 aa31.24■■■□□ 2.59
PMM2-207ENST00000565221 DNAJC5BQ9UF47 199 aa30.53■■■□□ 2.48
PMM2-207ENST00000565221 CCDC180Q9P1Z9 1646 aa29.89■■■□□ 2.37
PMM2-207ENST00000565221 RB1CC1Q8TDY2 1594 aa29.14■■■□□ 2.26
PMM2-207ENST00000565221 DNAJC5Q9H3Z4 198 aa29.03■■■□□ 2.24
PMM2-207ENST00000565221 PABPN1Q86U42 306 aaKnown RBP eCLIP28.9■■■□□ 2.22
PMM2-207ENST00000565221 NACADO15069 1562 aa28.63■■■□□ 2.17
PMM2-207ENST00000565221 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
PMM2-207ENST00000565221 BICRAQ9NZM4 1560 aa28.33■■■□□ 2.13
PMM2-207ENST00000565221 CECR2Q9BXF3 1484 aa28.31■■■□□ 2.12
PMM2-207ENST00000565221 DCAF8L2P0C7V8 631 aa28.21■■■□□ 2.11
PMM2-207ENST00000565221 CC2D2AQ9P2K1 1620 aa28.13■■■□□ 2.09
PMM2-207ENST00000565221 SHROOM4Q9ULL8 1493 aa27.88■■■□□ 2.05
PMM2-207ENST00000565221 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
PMM2-207ENST00000565221 EIF4G1Q04637 1599 aaKnown RBP27.76■■■□□ 2.03
PMM2-207ENST00000565221 CUX2O14529 1486 aa27.51■■□□□ 1.99
PMM2-207ENST00000565221 TRIM41Q8WV44 630 aa27.17■■□□□ 1.94
PMM2-207ENST00000565221 SCRIBQ14160 1630 aa27.16■■□□□ 1.94
PMM2-207ENST00000565221 ERCC6Q03468 1493 aa27.08■■□□□ 1.93
PMM2-207ENST00000565221 DCAF1Q9Y4B6 1507 aa26.97■■□□□ 1.91
PMM2-207ENST00000565221 ZCCHC6Q5VYS8 1495 aaKnown RBP26.85■■□□□ 1.89
PMM2-207ENST00000565221 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
PMM2-207ENST00000565221 NESP48681 1621 aa26.46■■□□□ 1.83
PMM2-207ENST00000565221 THOC2Q8NI27 1593 aaKnown RBP26.43■■□□□ 1.82
PMM2-207ENST00000565221 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
PMM2-207ENST00000565221 SMARCA2P51531 1590 aa26.17■■□□□ 1.78
PMM2-207ENST00000565221 HMGXB3Q12766 1538 aa26.13■■□□□ 1.77
PMM2-207ENST00000565221 LAMC3Q9Y6N6 1575 aa26.05■■□□□ 1.76
PMM2-207ENST00000565221 OSCARQ8IYS5 282 aa26.04■■□□□ 1.76
PMM2-207ENST00000565221 BAZ1AQ9NRL2 1556 aaPredicted RBP25.99■■□□□ 1.75
PMM2-207ENST00000565221 PDS5BQ9NTI5 1447 aa25.99■■□□□ 1.75
PMM2-207ENST00000565221 KIF21AQ7Z4S6 1674 aa25.98■■□□□ 1.75
PMM2-207ENST00000565221 AEBP2Q6ZN18 517 aaPredicted RBP25.89■■□□□ 1.74
PMM2-207ENST00000565221 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
PMM2-207ENST00000565221 MRC2Q9UBG0 1479 aa25.83■■□□□ 1.73
PMM2-207ENST00000565221 WDR62O43379 1518 aa25.8■■□□□ 1.72
PMM2-207ENST00000565221 SMARCA4P51532 1647 aa25.78■■□□□ 1.72
PMM2-207ENST00000565221 RIMBP3CA6NJZ7 1639 aa25.77■■□□□ 1.72
PMM2-207ENST00000565221 RIMBP3BA6NNM3 1639 aa25.77■■□□□ 1.72
PMM2-207ENST00000565221 RIMBP3Q9UFD9 1639 aa25.77■■□□□ 1.72
PMM2-207ENST00000565221 TRHP20396 242 aaPredicted RBP25.65■■□□□ 1.7
PMM2-207ENST00000565221 CADPSQ9ULU8 1353 aa25.62■■□□□ 1.69
PMM2-207ENST00000565221 ARHGEF11O15085 1522 aa25.6■■□□□ 1.69
PMM2-207ENST00000565221 PEG3Q9GZU2 1588 aa25.57■■□□□ 1.68
PMM2-207ENST00000565221 CYB5RLQ6IPT4 315 aa25.51■■□□□ 1.67
PMM2-207ENST00000565221 CEP164Q9UPV0 1460 aa25.46■■□□□ 1.67
PMM2-207ENST00000565221 FANCD2Q9BXW9 1451 aa25.32■■□□□ 1.64
PMM2-207ENST00000565221 ARAP1Q96P48 1450 aa25.27■■□□□ 1.64
PMM2-207ENST00000565221 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
PMM2-207ENST00000565221 URB2Q14146 1524 aaKnown RBP25.18■■□□□ 1.62
PMM2-207ENST00000565221 ZNF608Q9ULD9 1512 aaPredicted RBP25.1■■□□□ 1.61
PMM2-207ENST00000565221 RSF1Q96T23 1441 aaPredicted RBP25.04■■□□□ 1.6
PMM2-207ENST00000565221 CFTRP13569 1480 aa25.04■■□□□ 1.6
PMM2-207ENST00000565221 ILDR1Q86SU0 546 aaPredicted RBP25.02■■□□□ 1.6
PMM2-207ENST00000565221 IFT140Q96RY7 1462 aa25.01■■□□□ 1.59
PMM2-207ENST00000565221 EIF4G3O43432 1585 aaKnown RBP24.84■■□□□ 1.57
PMM2-207ENST00000565221 CHD1O14646 1710 aa24.84■■□□□ 1.57
PMM2-207ENST00000565221 FBLN2P98095 1184 aa24.81■■□□□ 1.56
PMM2-207ENST00000565221 WIZO95785 1651 aa24.78■■□□□ 1.56
PMM2-207ENST00000565221 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.541e-7■■■■□ 20.2
PMM2-207ENST00000565221 TOPBP1Q92547 1522 aa24.67■■□□□ 1.54
PMM2-207ENST00000565221 CLASP1Q7Z460 1538 aa24.62■■□□□ 1.53
PMM2-207ENST00000565221 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
PMM2-207ENST00000565221 TARBP1Q13395 1621 aaKnown RBP24.52■■□□□ 1.52
PMM2-207ENST00000565221 PRDM2Q13029 1718 aa24.51■■□□□ 1.51
PMM2-207ENST00000565221 GAPVD1Q14C86 1478 aa24.49■■□□□ 1.51
PMM2-207ENST00000565221 SYNJ1O43426 1573 aa24.48■■□□□ 1.51
PMM2-207ENST00000565221 DNMBPQ6XZF7 1577 aa24.45■■□□□ 1.5
PMM2-207ENST00000565221 TOP2AP11388 1531 aaKnown RBP24.42■■□□□ 1.5
PMM2-207ENST00000565221 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
PMM2-207ENST00000565221 SNAPC4Q5SXM2 1469 aa24.41■■□□□ 1.5
PMM2-207ENST00000565221 KDM4FA0A1W2PPD8 638 aa24.41■■□□□ 1.5
PMM2-207ENST00000565221 TDRD9Q8NDG6 1382 aaKnown RBP24.35■■□□□ 1.49
PMM2-207ENST00000565221 POLA1P09884 1462 aaPredicted RBP24.34■■□□□ 1.49
PMM2-207ENST00000565221 MAGI1Q96QZ7 1491 aaPredicted RBP24.29■■□□□ 1.48
PMM2-207ENST00000565221 RAD54L2Q9Y4B4 1467 aa24.27■■□□□ 1.48
PMM2-207ENST00000565221 SYNJ2O15056 1496 aa24.24■■□□□ 1.47
PMM2-207ENST00000565221 SOGA1O94964 1423 aa24.22■■□□□ 1.47
PMM2-207ENST00000565221 WDR97A6NE52 1622 aa24.2■■□□□ 1.46
PMM2-207ENST00000565221 KIF13AQ9H1H9 1805 aa24.18■■□□□ 1.46
PMM2-207ENST00000565221 CCDC88BA6NC98 1476 aa24.18■■□□□ 1.46
PMM2-207ENST00000565221 GRIN2BQ13224 1484 aa24.16■■□□□ 1.46
PMM2-207ENST00000565221 ERCC6L2Q5T890 1561 aa24.12■■□□□ 1.45
PMM2-207ENST00000565221 FAM69CQ0P6D2 419 aa24.05■■□□□ 1.44
PMM2-207ENST00000565221 ABCC10Q5T3U5 1492 aa24■■□□□ 1.43
PMM2-207ENST00000565221 KDM6BO15054 1643 aa23.99■■□□□ 1.43
PMM2-207ENST00000565221 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
PMM2-207ENST00000565221 FBXO41Q8TF61 875 aa23.98■■□□□ 1.43
PMM2-207ENST00000565221 CEP170Q5SW79 1584 aa23.96■■□□□ 1.43
PMM2-207ENST00000565221 HECW2Q9P2P5 1572 aa23.95■■□□□ 1.43
PMM2-207ENST00000565221 ADGRL1O94910 1474 aa23.87■■□□□ 1.41
PMM2-207ENST00000565221 DIP2BQ9P265 1576 aa23.86■■□□□ 1.41
PMM2-207ENST00000565221 PBRM1Q86U86 1689 aa23.86■■□□□ 1.41
PMM2-207ENST00000565221 GRIN2AQ12879 1464 aa23.84■■□□□ 1.41
PMM2-207ENST00000565221 MAPKBP1O60336 1514 aa23.83■■□□□ 1.41
PMM2-207ENST00000565221 NUP160Q12769 1436 aa23.83■■□□□ 1.4
PMM2-207ENST00000565221 SHROOM2Q13796 1616 aa23.82■■□□□ 1.4
PMM2-207ENST00000565221 NPM1P06748 294 aaKnown RBP eCLIP23.8■■□□□ 1.4
PMM2-207ENST00000565221 CUX1P39880 1505 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms