RNA–Protein interactions for RNA: ENST00000565167.1

RPAP1-208, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 1,712 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-208ENST00000565167 NISCHQ9Y2I1 1504 aa32.7■■■□□ 2.82
RPAP1-208ENST00000565167 CCDC180Q9P1Z9 1646 aa28.57■■■□□ 2.16
RPAP1-208ENST00000565167 ZCCHC6Q5VYS8 1495 aaKnown RBP27.41■■□□□ 1.98
RPAP1-208ENST00000565167 ABCC9O60706 1549 aa27.26■■□□□ 1.95
RPAP1-208ENST00000565167 DCAF8L2P0C7V8 631 aa27.1■■□□□ 1.93
RPAP1-208ENST00000565167 DCAF1Q9Y4B6 1507 aa27.04■■□□□ 1.92
RPAP1-208ENST00000565167 MYO15BQ96JP2 1530 aa26.79■■□□□ 1.88
RPAP1-208ENST00000565167 NACADO15069 1562 aa26.67■■□□□ 1.86
RPAP1-208ENST00000565167 SHROOM4Q9ULL8 1493 aa26.53■■□□□ 1.84
RPAP1-208ENST00000565167 RB1CC1Q8TDY2 1594 aa26.47■■□□□ 1.83
RPAP1-208ENST00000565167 SCRIBQ14160 1630 aa26.22■■□□□ 1.79
RPAP1-208ENST00000565167 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
RPAP1-208ENST00000565167 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
RPAP1-208ENST00000565167 PABPN1Q86U42 306 aaKnown RBP eCLIP25.62■■□□□ 1.69
RPAP1-208ENST00000565167 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
RPAP1-208ENST00000565167 CECR2Q9BXF3 1484 aa25.42■■□□□ 1.66
RPAP1-208ENST00000565167 RSF1Q96T23 1441 aaPredicted RBP25.31■■□□□ 1.64
RPAP1-208ENST00000565167 MROH2BQ7Z745 1585 aa25.25■■□□□ 1.63
RPAP1-208ENST00000565167 BAZ1AQ9NRL2 1556 aaPredicted RBP25.25■■□□□ 1.63
RPAP1-208ENST00000565167 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
RPAP1-208ENST00000565167 WIZO95785 1651 aa25.03■■□□□ 1.6
RPAP1-208ENST00000565167 EIF4G1Q04637 1599 aaKnown RBP24.93■■□□□ 1.58
RPAP1-208ENST00000565167 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
RPAP1-208ENST00000565167 ATAD2BQ9ULI0 1458 aa24.8■■□□□ 1.56
RPAP1-208ENST00000565167 SMARCA2P51531 1590 aa24.77■■□□□ 1.56
RPAP1-208ENST00000565167 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
RPAP1-208ENST00000565167 DNAJC5BQ9UF47 199 aa24.75■■□□□ 1.55
RPAP1-208ENST00000565167 CC2D2AQ9P2K1 1620 aa24.73■■□□□ 1.55
RPAP1-208ENST00000565167 NCAPD3P42695 1498 aa24.64■■□□□ 1.53
RPAP1-208ENST00000565167 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.53
RPAP1-208ENST00000565167 HMGXB3Q12766 1538 aa24.55■■□□□ 1.52
RPAP1-208ENST00000565167 CCDC88BA6NC98 1476 aa24.53■■□□□ 1.52
RPAP1-208ENST00000565167 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
RPAP1-208ENST00000565167 CFTRP13569 1480 aa24.02■■□□□ 1.44
RPAP1-208ENST00000565167 TRIM41Q8WV44 630 aa24■■□□□ 1.43
RPAP1-208ENST00000565167 CADPSQ9ULU8 1353 aa23.99■■□□□ 1.43
RPAP1-208ENST00000565167 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
RPAP1-208ENST00000565167 PRDM2Q13029 1718 aa23.87■■□□□ 1.41
RPAP1-208ENST00000565167 WRNQ14191 1432 aaPredicted RBP eCLIP23.81■■□□□ 1.4
RPAP1-208ENST00000565167 NESP48681 1621 aa23.81■■□□□ 1.4
RPAP1-208ENST00000565167 LAMC3Q9Y6N6 1575 aa23.8■■□□□ 1.4
RPAP1-208ENST00000565167 SYNJ1O43426 1573 aa23.7■■□□□ 1.38
RPAP1-208ENST00000565167 FANCD2Q9BXW9 1451 aa23.7■■□□□ 1.38
RPAP1-208ENST00000565167 TOP2BQ02880 1626 aa23.64■■□□□ 1.37
RPAP1-208ENST00000565167 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
RPAP1-208ENST00000565167 CUX1P39880 1505 aa23.61■■□□□ 1.37
RPAP1-208ENST00000565167 BIVM-ERCC5R4GMW8 1640 aa23.61■■□□□ 1.37
RPAP1-208ENST00000565167 CEP164Q9UPV0 1460 aa23.56■■□□□ 1.36
RPAP1-208ENST00000565167 FAM9AQ8IZU1 332 aaPredicted RBP23.53■■□□□ 1.36
RPAP1-208ENST00000565167 KIF21AQ7Z4S6 1674 aa23.5■■□□□ 1.35
RPAP1-208ENST00000565167 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
RPAP1-208ENST00000565167 SOGA1O94964 1423 aa23.47■■□□□ 1.35
RPAP1-208ENST00000565167 DNMBPQ6XZF7 1577 aa23.45■■□□□ 1.34
RPAP1-208ENST00000565167 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
RPAP1-208ENST00000565167 URB2Q14146 1524 aaKnown RBP23.41■■□□□ 1.34
RPAP1-208ENST00000565167 RUSC2Q8N2Y8 1516 aa23.4■■□□□ 1.34
RPAP1-208ENST00000565167 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
RPAP1-208ENST00000565167 EEA1Q15075 1411 aa23.4■■□□□ 1.34
RPAP1-208ENST00000565167 FGD5Q6ZNL6 1462 aa23.38■■□□□ 1.33
RPAP1-208ENST00000565167 THOC2Q8NI27 1593 aaKnown RBP23.35■■□□□ 1.33
RPAP1-208ENST00000565167 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.32
RPAP1-208ENST00000565167 MRC2Q9UBG0 1479 aa23.32■■□□□ 1.32
RPAP1-208ENST00000565167 POLA1P09884 1462 aaPredicted RBP23.29■■□□□ 1.32
RPAP1-208ENST00000565167 WDR62O43379 1518 aa23.24■■□□□ 1.31
RPAP1-208ENST00000565167 KIF27Q86VH2 1401 aa23.23■■□□□ 1.31
RPAP1-208ENST00000565167 CUX2O14529 1486 aa23.22■■□□□ 1.31
RPAP1-208ENST00000565167 RAD54L2Q9Y4B4 1467 aa23.22■■□□□ 1.31
RPAP1-208ENST00000565167 EHMT2Q96KQ7 1210 aa23.18■■□□□ 1.3
RPAP1-208ENST00000565167 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
RPAP1-208ENST00000565167 TARBP1Q13395 1621 aaKnown RBP23.09■■□□□ 1.29
RPAP1-208ENST00000565167 WDR97A6NE52 1622 aa23.09■■□□□ 1.29
RPAP1-208ENST00000565167 KIF21BO75037 1637 aa23.08■■□□□ 1.29
RPAP1-208ENST00000565167 IGF1RP08069 1367 aa23.08■■□□□ 1.28
RPAP1-208ENST00000565167 GOLGA3Q08378 1498 aa23.05■■□□□ 1.28
RPAP1-208ENST00000565167 PRXQ9BXM0 1461 aa23.04■■□□□ 1.28
RPAP1-208ENST00000565167 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
RPAP1-208ENST00000565167 IFT140Q96RY7 1462 aa23.01■■□□□ 1.27
RPAP1-208ENST00000565167 UBTFP17480 764 aaKnown RBP23■■□□□ 1.27
RPAP1-208ENST00000565167 RAPGEF2Q9Y4G8 1499 aa22.99■■□□□ 1.27
RPAP1-208ENST00000565167 ABCA5Q8WWZ7 1642 aa22.98■■□□□ 1.27
RPAP1-208ENST00000565167 TNIKQ9UKE5 1360 aa22.98■■□□□ 1.27
RPAP1-208ENST00000565167 GAPVD1Q14C86 1478 aa22.97■■□□□ 1.27
RPAP1-208ENST00000565167 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
RPAP1-208ENST00000565167 CARMIL1Q5VZK9 1371 aa22.95■■□□□ 1.26
RPAP1-208ENST00000565167 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.26
RPAP1-208ENST00000565167 ZNF608Q9ULD9 1512 aaPredicted RBP22.89■■□□□ 1.25
RPAP1-208ENST00000565167 CUL7Q14999 1698 aa22.86■■□□□ 1.25
RPAP1-208ENST00000565167 PBRM1Q86U86 1689 aa22.83■■□□□ 1.24
RPAP1-208ENST00000565167 GRIN2BQ13224 1484 aa22.82■■□□□ 1.24
RPAP1-208ENST00000565167 CEP162Q5TB80 1403 aa22.81■■□□□ 1.24
RPAP1-208ENST00000565167 EIF4G3O43432 1585 aaKnown RBP22.78■■□□□ 1.24
RPAP1-208ENST00000565167 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
RPAP1-208ENST00000565167 CLIP1P30622 1438 aa22.68■■□□□ 1.22
RPAP1-208ENST00000565167 ADAMTS12P58397 1594 aa22.68■■□□□ 1.22
RPAP1-208ENST00000565167 SNAPC4Q5SXM2 1469 aa22.66■■□□□ 1.22
RPAP1-208ENST00000565167 RANGAP1P46060 587 aaPredicted RBP22.65■■□□□ 1.22
RPAP1-208ENST00000565167 MAGI1Q96QZ7 1491 aaPredicted RBP22.63■■□□□ 1.21
RPAP1-208ENST00000565167 CTTNBP2Q8WZ74 1663 aa22.58■■□□□ 1.21
RPAP1-208ENST00000565167 SYNJ2O15056 1496 aa22.55■■□□□ 1.2
RPAP1-208ENST00000565167 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms