RNA–Protein interactions for RNA: ENST00000565158.5

ULK4P3-202, Transcript of ULK4 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene ULK4P3, Length 593 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ULK4P3-202ENST00000565158 NISCHQ9Y2I1 1504 aa22.89■■□□□ 1.26
ULK4P3-202ENST00000565158 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
ULK4P3-202ENST00000565158 ABCC9O60706 1549 aa20.62■□□□□ 0.89
ULK4P3-202ENST00000565158 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
ULK4P3-202ENST00000565158 NACADO15069 1562 aa19.51■□□□□ 0.71
ULK4P3-202ENST00000565158 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
ULK4P3-202ENST00000565158 UNC13AQ9UPW8 1703 aa19.26■□□□□ 0.67
ULK4P3-202ENST00000565158 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
ULK4P3-202ENST00000565158 DCAF8L2P0C7V8 631 aa19.14■□□□□ 0.65
ULK4P3-202ENST00000565158 BICRAQ9NZM4 1560 aa19.12■□□□□ 0.65
ULK4P3-202ENST00000565158 PABPN1Q86U42 306 aaKnown RBP eCLIP19.1■□□□□ 0.65
ULK4P3-202ENST00000565158 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
ULK4P3-202ENST00000565158 DCAF1Q9Y4B6 1507 aa18.96■□□□□ 0.63
ULK4P3-202ENST00000565158 SHROOM4Q9ULL8 1493 aa18.89■□□□□ 0.61
ULK4P3-202ENST00000565158 SCRIBQ14160 1630 aa18.72■□□□□ 0.59
ULK4P3-202ENST00000565158 CC2D2AQ9P2K1 1620 aa18.68■□□□□ 0.58
ULK4P3-202ENST00000565158 EIF4G1Q04637 1599 aaKnown RBP18.63■□□□□ 0.57
ULK4P3-202ENST00000565158 CECR2Q9BXF3 1484 aa18.6■□□□□ 0.57
ULK4P3-202ENST00000565158 NCAPD3P42695 1498 aa18■□□□□ 0.47
ULK4P3-202ENST00000565158 DNAJC5Q9H3Z4 198 aa17.91■□□□□ 0.46
ULK4P3-202ENST00000565158 ATAD2BQ9ULI0 1458 aa17.9■□□□□ 0.46
ULK4P3-202ENST00000565158 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
ULK4P3-202ENST00000565158 HMGXB3Q12766 1538 aa17.89■□□□□ 0.45
ULK4P3-202ENST00000565158 CUX2O14529 1486 aa17.88■□□□□ 0.45
ULK4P3-202ENST00000565158 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
ULK4P3-202ENST00000565158 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
ULK4P3-202ENST00000565158 PEG3Q9GZU2 1588 aa17.78■□□□□ 0.44
ULK4P3-202ENST00000565158 BAZ1AQ9NRL2 1556 aaPredicted RBP17.78■□□□□ 0.44
ULK4P3-202ENST00000565158 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
ULK4P3-202ENST00000565158 NESP48681 1621 aa17.7■□□□□ 0.42
ULK4P3-202ENST00000565158 THOC2Q8NI27 1593 aaKnown RBP17.63■□□□□ 0.41
ULK4P3-202ENST00000565158 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
ULK4P3-202ENST00000565158 MROH2BQ7Z745 1585 aa17.62■□□□□ 0.41
ULK4P3-202ENST00000565158 KIF21AQ7Z4S6 1674 aa17.54■□□□□ 0.4
ULK4P3-202ENST00000565158 PDS5BQ9NTI5 1447 aa17.46■□□□□ 0.39
ULK4P3-202ENST00000565158 WIZO95785 1651 aa17.41■□□□□ 0.38
ULK4P3-202ENST00000565158 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
ULK4P3-202ENST00000565158 MRC2Q9UBG0 1479 aa17.35■□□□□ 0.37
ULK4P3-202ENST00000565158 WDR62O43379 1518 aa17.35■□□□□ 0.37
ULK4P3-202ENST00000565158 CEP164Q9UPV0 1460 aa17.25■□□□□ 0.35
ULK4P3-202ENST00000565158 CFTRP13569 1480 aa17.22■□□□□ 0.35
ULK4P3-202ENST00000565158 FANCD2Q9BXW9 1451 aa17.21■□□□□ 0.35
ULK4P3-202ENST00000565158 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.34
ULK4P3-202ENST00000565158 RSF1Q96T23 1441 aaPredicted RBP17.2■□□□□ 0.34
ULK4P3-202ENST00000565158 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
ULK4P3-202ENST00000565158 URB2Q14146 1524 aaKnown RBP17.1■□□□□ 0.33
ULK4P3-202ENST00000565158 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
ULK4P3-202ENST00000565158 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
ULK4P3-202ENST00000565158 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
ULK4P3-202ENST00000565158 IFT140Q96RY7 1462 aa16.91■□□□□ 0.3
ULK4P3-202ENST00000565158 TOPBP1Q92547 1522 aa16.89■□□□□ 0.29
ULK4P3-202ENST00000565158 ZNF608Q9ULD9 1512 aaPredicted RBP16.87■□□□□ 0.29
ULK4P3-202ENST00000565158 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
ULK4P3-202ENST00000565158 EIF4G3O43432 1585 aaKnown RBP16.84■□□□□ 0.29
ULK4P3-202ENST00000565158 DNMBPQ6XZF7 1577 aa16.84■□□□□ 0.29
ULK4P3-202ENST00000565158 RIMBP3CA6NJZ7 1639 aa16.84■□□□□ 0.29
ULK4P3-202ENST00000565158 RIMBP3BA6NNM3 1639 aa16.84■□□□□ 0.29
ULK4P3-202ENST00000565158 RIMBP3Q9UFD9 1639 aa16.84■□□□□ 0.29
ULK4P3-202ENST00000565158 TARBP1Q13395 1621 aaKnown RBP16.8■□□□□ 0.28
ULK4P3-202ENST00000565158 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
ULK4P3-202ENST00000565158 CHD1O14646 1710 aa16.73■□□□□ 0.27
ULK4P3-202ENST00000565158 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
ULK4P3-202ENST00000565158 AQRO60306 1485 aaKnown RBP eCLIP16.68■□□□□ 0.26
ULK4P3-202ENST00000565158 WDR97A6NE52 1622 aa16.66■□□□□ 0.26
ULK4P3-202ENST00000565158 RAD54L2Q9Y4B4 1467 aa16.61■□□□□ 0.25
ULK4P3-202ENST00000565158 SOGA1O94964 1423 aa16.58■□□□□ 0.24
ULK4P3-202ENST00000565158 FGD5Q6ZNL6 1462 aa16.58■□□□□ 0.24
ULK4P3-202ENST00000565158 ARAP1Q96P48 1450 aa16.58■□□□□ 0.24
ULK4P3-202ENST00000565158 CUX1P39880 1505 aa16.57■□□□□ 0.24
ULK4P3-202ENST00000565158 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
ULK4P3-202ENST00000565158 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
ULK4P3-202ENST00000565158 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
ULK4P3-202ENST00000565158 CYB5RLQ6IPT4 315 aa16.52■□□□□ 0.24
ULK4P3-202ENST00000565158 MAGI1Q96QZ7 1491 aaPredicted RBP16.52■□□□□ 0.23
ULK4P3-202ENST00000565158 GRIN2BQ13224 1484 aa16.49■□□□□ 0.23
ULK4P3-202ENST00000565158 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
ULK4P3-202ENST00000565158 FBLN2P98095 1184 aa16.49■□□□□ 0.23
ULK4P3-202ENST00000565158 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
ULK4P3-202ENST00000565158 SYNJ2O15056 1496 aa16.46■□□□□ 0.23
ULK4P3-202ENST00000565158 ABCA5Q8WWZ7 1642 aa16.44■□□□□ 0.22
ULK4P3-202ENST00000565158 ABCA10Q8WWZ4 1543 aa16.41■□□□□ 0.22
ULK4P3-202ENST00000565158 GAPVD1Q14C86 1478 aa16.41■□□□□ 0.22
ULK4P3-202ENST00000565158 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
ULK4P3-202ENST00000565158 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
ULK4P3-202ENST00000565158 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.2
ULK4P3-202ENST00000565158 TOP2BQ02880 1626 aa16.3■□□□□ 0.2
ULK4P3-202ENST00000565158 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
ULK4P3-202ENST00000565158 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
ULK4P3-202ENST00000565158 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
ULK4P3-202ENST00000565158 NUP160Q12769 1436 aa16.26■□□□□ 0.19
ULK4P3-202ENST00000565158 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
ULK4P3-202ENST00000565158 SHROOM2Q13796 1616 aa16.24■□□□□ 0.19
ULK4P3-202ENST00000565158 ERCC6L2Q5T890 1561 aa16.24■□□□□ 0.19
ULK4P3-202ENST00000565158 ERICH3Q5RHP9 1530 aa16.22■□□□□ 0.19
ULK4P3-202ENST00000565158 SUPT5HO00267 1087 aaKnown RBP16.2■□□□□ 0.18
ULK4P3-202ENST00000565158 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
ULK4P3-202ENST00000565158 RUSC2Q8N2Y8 1516 aa16.09■□□□□ 0.17
ULK4P3-202ENST00000565158 KIF13AQ9H1H9 1805 aa16.06■□□□□ 0.16
ULK4P3-202ENST00000565158 PRG4Q92954 1404 aaPredicted RBP16.04■□□□□ 0.16
ULK4P3-202ENST00000565158 JPH4Q96JJ6 628 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms