RNA–Protein interactions for RNA: ENST00000565035.1

RPAP1-207, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 4

Gene RPAP1, Length 601 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-207ENST00000565035 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
RPAP1-207ENST00000565035 ABCC9O60706 1549 aa22.53■■□□□ 1.2
RPAP1-207ENST00000565035 CCDC180Q9P1Z9 1646 aa22.37■■□□□ 1.17
RPAP1-207ENST00000565035 RB1CC1Q8TDY2 1594 aa21.39■■□□□ 1.01
RPAP1-207ENST00000565035 DNAJC5BQ9UF47 199 aa21.29■■□□□ 1
RPAP1-207ENST00000565035 NACADO15069 1562 aa21.23■□□□□ 0.99
RPAP1-207ENST00000565035 DCAF8L2P0C7V8 631 aa21.15■□□□□ 0.98
RPAP1-207ENST00000565035 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
RPAP1-207ENST00000565035 MYO15BQ96JP2 1530 aa20.94■□□□□ 0.94
RPAP1-207ENST00000565035 UNC13AQ9UPW8 1703 aa20.79■□□□□ 0.92
RPAP1-207ENST00000565035 BICRAQ9NZM4 1560 aa20.76■□□□□ 0.91
RPAP1-207ENST00000565035 ZCCHC6Q5VYS8 1495 aaKnown RBP20.65■□□□□ 0.9
RPAP1-207ENST00000565035 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
RPAP1-207ENST00000565035 SHROOM4Q9ULL8 1493 aa20.51■□□□□ 0.87
RPAP1-207ENST00000565035 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
RPAP1-207ENST00000565035 CECR2Q9BXF3 1484 aa20.32■□□□□ 0.84
RPAP1-207ENST00000565035 CC2D2AQ9P2K1 1620 aa20.32■□□□□ 0.84
RPAP1-207ENST00000565035 EIF4G1Q04637 1599 aaKnown RBP20.26■□□□□ 0.83
RPAP1-207ENST00000565035 DNAJC5Q9H3Z4 198 aa19.65■□□□□ 0.74
RPAP1-207ENST00000565035 NCAPD3P42695 1498 aa19.65■□□□□ 0.74
RPAP1-207ENST00000565035 ATAD2BQ9ULI0 1458 aa19.55■□□□□ 0.72
RPAP1-207ENST00000565035 CUX2O14529 1486 aa19.48■□□□□ 0.71
RPAP1-207ENST00000565035 SMARCA2P51531 1590 aa19.47■□□□□ 0.71
RPAP1-207ENST00000565035 ERCC6Q03468 1493 aa19.47■□□□□ 0.71
RPAP1-207ENST00000565035 SMARCA4P51532 1647 aa19.45■□□□□ 0.7
RPAP1-207ENST00000565035 HMGXB3Q12766 1538 aa19.44■□□□□ 0.7
RPAP1-207ENST00000565035 BAZ1AQ9NRL2 1556 aaPredicted RBP19.37■□□□□ 0.69
RPAP1-207ENST00000565035 BAZ1BQ9UIG0 1483 aaKnown RBP19.34■□□□□ 0.69
RPAP1-207ENST00000565035 NESP48681 1621 aa19.32■□□□□ 0.68
RPAP1-207ENST00000565035 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
RPAP1-207ENST00000565035 MROH2BQ7Z745 1585 aa19.22■□□□□ 0.67
RPAP1-207ENST00000565035 LAMC3Q9Y6N6 1575 aa19.17■□□□□ 0.66
RPAP1-207ENST00000565035 PDS5BQ9NTI5 1447 aa19.11■□□□□ 0.65
RPAP1-207ENST00000565035 THOC2Q8NI27 1593 aaKnown RBP19.1■□□□□ 0.65
RPAP1-207ENST00000565035 CADPSQ9ULU8 1353 aa19.05■□□□□ 0.64
RPAP1-207ENST00000565035 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
RPAP1-207ENST00000565035 WIZO95785 1651 aa18.93■□□□□ 0.62
RPAP1-207ENST00000565035 MRC2Q9UBG0 1479 aa18.92■□□□□ 0.62
RPAP1-207ENST00000565035 WDR62O43379 1518 aa18.86■□□□□ 0.61
RPAP1-207ENST00000565035 CEP164Q9UPV0 1460 aa18.82■□□□□ 0.6
RPAP1-207ENST00000565035 RSF1Q96T23 1441 aaPredicted RBP18.82■□□□□ 0.6
RPAP1-207ENST00000565035 FANCD2Q9BXW9 1451 aa18.8■□□□□ 0.6
RPAP1-207ENST00000565035 CFTRP13569 1480 aa18.79■□□□□ 0.6
RPAP1-207ENST00000565035 TOP2AP11388 1531 aaKnown RBP18.72■□□□□ 0.59
RPAP1-207ENST00000565035 TRIM41Q8WV44 630 aa18.7■□□□□ 0.58
RPAP1-207ENST00000565035 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.57
RPAP1-207ENST00000565035 OSCARQ8IYS5 282 aa18.63■□□□□ 0.57
RPAP1-207ENST00000565035 CCDC88BA6NC98 1476 aa18.54■□□□□ 0.56
RPAP1-207ENST00000565035 IFT140Q96RY7 1462 aa18.46■□□□□ 0.55
RPAP1-207ENST00000565035 PRDM2Q13029 1718 aa18.44■□□□□ 0.54
RPAP1-207ENST00000565035 ZNF608Q9ULD9 1512 aaPredicted RBP18.43■□□□□ 0.54
RPAP1-207ENST00000565035 TOPBP1Q92547 1522 aa18.42■□□□□ 0.54
RPAP1-207ENST00000565035 ABCC8Q09428 1581 aa18.41■□□□□ 0.54
RPAP1-207ENST00000565035 DNMBPQ6XZF7 1577 aa18.32■□□□□ 0.52
RPAP1-207ENST00000565035 RIMBP3CA6NJZ7 1639 aa18.28■□□□□ 0.52
RPAP1-207ENST00000565035 RIMBP3BA6NNM3 1639 aa18.28■□□□□ 0.52
RPAP1-207ENST00000565035 RIMBP3Q9UFD9 1639 aa18.28■□□□□ 0.52
RPAP1-207ENST00000565035 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.51
RPAP1-207ENST00000565035 EIF4G3O43432 1585 aaKnown RBP18.26■□□□□ 0.51
RPAP1-207ENST00000565035 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
RPAP1-207ENST00000565035 TARBP1Q13395 1621 aaKnown RBP18.24■□□□□ 0.51
RPAP1-207ENST00000565035 POLA1P09884 1462 aaPredicted RBP18.23■□□□□ 0.51
RPAP1-207ENST00000565035 FBLN2P98095 1184 aa18.19■□□□□ 0.5
RPAP1-207ENST00000565035 CYB5RLQ6IPT4 315 aa18.19■□□□□ 0.5
RPAP1-207ENST00000565035 SOGA1O94964 1423 aa18.18■□□□□ 0.5
RPAP1-207ENST00000565035 RAD54L2Q9Y4B4 1467 aa18.16■□□□□ 0.5
RPAP1-207ENST00000565035 TDRD9Q8NDG6 1382 aaKnown RBP18.15■□□□□ 0.5
RPAP1-207ENST00000565035 CHD1O14646 1710 aa18.11■□□□□ 0.49
RPAP1-207ENST00000565035 FGD5Q6ZNL6 1462 aa18.09■□□□□ 0.49
RPAP1-207ENST00000565035 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
RPAP1-207ENST00000565035 WDR97A6NE52 1622 aa18.05■□□□□ 0.48
RPAP1-207ENST00000565035 CUX1P39880 1505 aa18.05■□□□□ 0.48
RPAP1-207ENST00000565035 CHMP7Q8WUX9 453 aaPredicted RBP18.05■□□□□ 0.48
RPAP1-207ENST00000565035 SNAPC4Q5SXM2 1469 aa18.05■□□□□ 0.48
RPAP1-207ENST00000565035 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
RPAP1-207ENST00000565035 MAGI1Q96QZ7 1491 aaPredicted RBP18.01■□□□□ 0.47
RPAP1-207ENST00000565035 TRHP20396 242 aaPredicted RBP18.01■□□□□ 0.47
RPAP1-207ENST00000565035 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
RPAP1-207ENST00000565035 SYNJ2O15056 1496 aa17.96■□□□□ 0.47
RPAP1-207ENST00000565035 SYNJ1O43426 1573 aa17.96■□□□□ 0.46
RPAP1-207ENST00000565035 GAPVD1Q14C86 1478 aa17.93■□□□□ 0.46
RPAP1-207ENST00000565035 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
RPAP1-207ENST00000565035 ABCA10Q8WWZ4 1543 aa17.9■□□□□ 0.46
RPAP1-207ENST00000565035 WRNQ14191 1432 aaPredicted RBP eCLIP17.83■□□□□ 0.45
RPAP1-207ENST00000565035 ABCA5Q8WWZ7 1642 aa17.83■□□□□ 0.44
RPAP1-207ENST00000565035 PBRM1Q86U86 1689 aa17.82■□□□□ 0.44
RPAP1-207ENST00000565035 GRIN2AQ12879 1464 aa17.77■□□□□ 0.44
RPAP1-207ENST00000565035 NUP160Q12769 1436 aa17.73■□□□□ 0.43
RPAP1-207ENST00000565035 TOP2BQ02880 1626 aa17.72■□□□□ 0.43
RPAP1-207ENST00000565035 FHAD1B1AJZ9 1412 aa17.72■□□□□ 0.43
RPAP1-207ENST00000565035 BIVM-ERCC5R4GMW8 1640 aa17.7■□□□□ 0.42
RPAP1-207ENST00000565035 ADAMTS12P58397 1594 aa17.7■□□□□ 0.42
RPAP1-207ENST00000565035 CEP170Q5SW79 1584 aa17.68■□□□□ 0.42
RPAP1-207ENST00000565035 ERCC6L2Q5T890 1561 aa17.67■□□□□ 0.42
RPAP1-207ENST00000565035 ERICH3Q5RHP9 1530 aa17.67■□□□□ 0.42
RPAP1-207ENST00000565035 SHROOM2Q13796 1616 aa17.61■□□□□ 0.41
RPAP1-207ENST00000565035 JPH4Q96JJ6 628 aa17.59■□□□□ 0.41
RPAP1-207ENST00000565035 PRG4Q92954 1404 aaPredicted RBP17.57■□□□□ 0.4
RPAP1-207ENST00000565035 AEBP2Q6ZN18 517 aaPredicted RBP17.56■□□□□ 0.4
RPAP1-207ENST00000565035 IGF1RP08069 1367 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms