RNA–Protein interactions for RNA: ENST00000564960.1

NDRG4-227, Transcript of NDRG family member 4, humanhuman

TSL 5

Gene NDRG4, Length 865 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG4-227ENST00000564960 NISCHQ9Y2I1 1504 aa46.31■■■■■ 5
NDRG4-227ENST00000564960 CCDC180Q9P1Z9 1646 aa41.32■■■■■ 4.2
NDRG4-227ENST00000564960 ABCC9O60706 1549 aa40.72■■■■■ 4.11
NDRG4-227ENST00000564960 RB1CC1Q8TDY2 1594 aa39.06■■■■□ 3.84
NDRG4-227ENST00000564960 NACADO15069 1562 aa38.94■■■■□ 3.82
NDRG4-227ENST00000564960 DCAF8L2P0C7V8 631 aa38.82■■■■□ 3.8
NDRG4-227ENST00000564960 MYO15BQ96JP2 1530 aa38.61■■■■□ 3.77
NDRG4-227ENST00000564960 ZCCHC6Q5VYS8 1495 aaKnown RBP38.5■■■■□ 3.75
NDRG4-227ENST00000564960 DCAF1Q9Y4B6 1507 aa38.32■■■■□ 3.72
NDRG4-227ENST00000564960 UNC13AQ9UPW8 1703 aa38.12■■■■□ 3.69
NDRG4-227ENST00000564960 PABPN1Q86U42 306 aaKnown RBP eCLIP38■■■■□ 3.67
NDRG4-227ENST00000564960 BICRAQ9NZM4 1560 aa37.86■■■■□ 3.65
NDRG4-227ENST00000564960 DNAJC5BQ9UF47 199 aa37.66■■■■□ 3.62
NDRG4-227ENST00000564960 SCRIBQ14160 1630 aa37.65■■■■□ 3.62
NDRG4-227ENST00000564960 SHROOM4Q9ULL8 1493 aa37.49■■■■□ 3.59
NDRG4-227ENST00000564960 EIF4G1Q04637 1599 aaKnown RBP36.91■■■■□ 3.5
NDRG4-227ENST00000564960 CC2D2AQ9P2K1 1620 aa36.83■■■■□ 3.49
NDRG4-227ENST00000564960 CECR2Q9BXF3 1484 aa36.65■■■■□ 3.46
NDRG4-227ENST00000564960 SMARCA4P51532 1647 aa36■■■■□ 3.35
NDRG4-227ENST00000564960 NCAPD3P42695 1498 aa35.93■■■■□ 3.34
NDRG4-227ENST00000564960 BAZ1AQ9NRL2 1556 aaPredicted RBP35.93■■■■□ 3.34
NDRG4-227ENST00000564960 ATAD2BQ9ULI0 1458 aa35.89■■■■□ 3.34
NDRG4-227ENST00000564960 SMARCA2P51531 1590 aa35.85■■■■□ 3.33
NDRG4-227ENST00000564960 HMGXB3Q12766 1538 aa35.73■■■■□ 3.31
NDRG4-227ENST00000564960 MROH2BQ7Z745 1585 aa35.67■■■■□ 3.3
NDRG4-227ENST00000564960 PEG3Q9GZU2 1588 aa35.66■■■■□ 3.3
NDRG4-227ENST00000564960 BAZ1BQ9UIG0 1483 aaKnown RBP35.59■■■■□ 3.29
NDRG4-227ENST00000564960 WIZO95785 1651 aa35.26■■■■□ 3.23
NDRG4-227ENST00000564960 ERCC6Q03468 1493 aa35.16■■■■□ 3.22
NDRG4-227ENST00000564960 RSF1Q96T23 1441 aaPredicted RBP35.15■■■■□ 3.22
NDRG4-227ENST00000564960 NESP48681 1621 aa35.14■■■■□ 3.22
NDRG4-227ENST00000564960 LAMC3Q9Y6N6 1575 aa35.04■■■■□ 3.2
NDRG4-227ENST00000564960 CUX2O14529 1486 aa34.9■■■■□ 3.18
NDRG4-227ENST00000564960 TOP2AP11388 1531 aaKnown RBP34.89■■■■□ 3.18
NDRG4-227ENST00000564960 CADPSQ9ULU8 1353 aa34.87■■■■□ 3.17
NDRG4-227ENST00000564960 PDS5BQ9NTI5 1447 aa34.82■■■■□ 3.17
NDRG4-227ENST00000564960 KIF21AQ7Z4S6 1674 aa34.71■■■■□ 3.15
NDRG4-227ENST00000564960 THOC2Q8NI27 1593 aaKnown RBP34.69■■■■□ 3.14
NDRG4-227ENST00000564960 CFTRP13569 1480 aa34.58■■■■□ 3.13
NDRG4-227ENST00000564960 CCDC88BA6NC98 1476 aa34.47■■■■□ 3.11
NDRG4-227ENST00000564960 MRC2Q9UBG0 1479 aa34.47■■■■□ 3.11
NDRG4-227ENST00000564960 FANCD2Q9BXW9 1451 aa34.46■■■■□ 3.11
NDRG4-227ENST00000564960 CEP164Q9UPV0 1460 aa34.46■■■■□ 3.11
NDRG4-227ENST00000564960 WDR62O43379 1518 aa34.36■■■■□ 3.09
NDRG4-227ENST00000564960 PRDM2Q13029 1718 aa34.27■■■■□ 3.08
NDRG4-227ENST00000564960 DNAJC5Q9H3Z4 198 aa34.21■■■■□ 3.07
NDRG4-227ENST00000564960 URB2Q14146 1524 aaKnown RBP34.13■■■■□ 3.05
NDRG4-227ENST00000564960 SUPT5HO00267 1087 aaKnown RBP34■■■■□ 3.03
NDRG4-227ENST00000564960 ABCC8Q09428 1581 aa33.88■■■■□ 3.01
NDRG4-227ENST00000564960 TOPBP1Q92547 1522 aa33.87■■■■□ 3.01
NDRG4-227ENST00000564960 DNMBPQ6XZF7 1577 aa33.81■■■■□ 3
NDRG4-227ENST00000564960 IFT140Q96RY7 1462 aa33.76■■■□□ 2.99
NDRG4-227ENST00000564960 ZNF608Q9ULD9 1512 aaPredicted RBP33.6■■■□□ 2.97
NDRG4-227ENST00000564960 POLA1P09884 1462 aaPredicted RBP33.56■■■□□ 2.96
NDRG4-227ENST00000564960 TARBP1Q13395 1621 aaKnown RBP33.52■■■□□ 2.96
NDRG4-227ENST00000564960 CUX1P39880 1505 aa33.48■■■□□ 2.95
NDRG4-227ENST00000564960 EIF4G3O43432 1585 aaKnown RBP33.46■■■□□ 2.95
NDRG4-227ENST00000564960 FGD5Q6ZNL6 1462 aa33.43■■■□□ 2.94
NDRG4-227ENST00000564960 SOGA1O94964 1423 aa33.42■■■□□ 2.94
NDRG4-227ENST00000564960 RAD54L2Q9Y4B4 1467 aa33.41■■■□□ 2.94
NDRG4-227ENST00000564960 OSCARQ8IYS5 282 aa33.4■■■□□ 2.94
NDRG4-227ENST00000564960 AQRO60306 1485 aaKnown RBP eCLIP33.38■■■□□ 2.93
NDRG4-227ENST00000564960 TDRD9Q8NDG6 1382 aaKnown RBP33.27■■■□□ 2.92
NDRG4-227ENST00000564960 WDR97A6NE52 1622 aa33.27■■■□□ 2.92
NDRG4-227ENST00000564960 WRNQ14191 1432 aaPredicted RBP eCLIP33.17■■■□□ 2.9
NDRG4-227ENST00000564960 TOP2BQ02880 1626 aa33.12■■■□□ 2.89
NDRG4-227ENST00000564960 BIVM-ERCC5R4GMW8 1640 aa33.11■■■□□ 2.89
NDRG4-227ENST00000564960 ABCA10Q8WWZ4 1543 aa33.1■■■□□ 2.89
NDRG4-227ENST00000564960 CHD1O14646 1710 aa33.09■■■□□ 2.89
NDRG4-227ENST00000564960 GRIN2BQ13224 1484 aa33.08■■■□□ 2.89
NDRG4-227ENST00000564960 SYNJ1O43426 1573 aa33.08■■■□□ 2.89
NDRG4-227ENST00000564960 SNAPC4Q5SXM2 1469 aa33.06■■■□□ 2.88
NDRG4-227ENST00000564960 FBLN2P98095 1184 aa33.05■■■□□ 2.88
NDRG4-227ENST00000564960 GAPVD1Q14C86 1478 aa33.03■■■□□ 2.88
NDRG4-227ENST00000564960 MAGI1Q96QZ7 1491 aaPredicted RBP33.03■■■□□ 2.88
NDRG4-227ENST00000564960 ABCA5Q8WWZ7 1642 aa32.99■■■□□ 2.87
NDRG4-227ENST00000564960 PBRM1Q86U86 1689 aa32.96■■■□□ 2.87
NDRG4-227ENST00000564960 TRIM41Q8WV44 630 aa32.93■■■□□ 2.86
NDRG4-227ENST00000564960 CHMP7Q8WUX9 453 aaPredicted RBP32.92■■■□□ 2.86
NDRG4-227ENST00000564960 SYNJ2O15056 1496 aa32.9■■■□□ 2.86
NDRG4-227ENST00000564960 RIMBP3CA6NJZ7 1639 aa32.88■■■□□ 2.85
NDRG4-227ENST00000564960 RIMBP3BA6NNM3 1639 aa32.88■■■□□ 2.85
NDRG4-227ENST00000564960 RIMBP3Q9UFD9 1639 aa32.88■■■□□ 2.85
NDRG4-227ENST00000564960 ARHGEF11O15085 1522 aa32.85■■■□□ 2.85
NDRG4-227ENST00000564960 CLASP1Q7Z460 1538 aa32.75■■■□□ 2.83
NDRG4-227ENST00000564960 ERICH3Q5RHP9 1530 aa32.71■■■□□ 2.83
NDRG4-227ENST00000564960 ADAMTS12P58397 1594 aa32.7■■■□□ 2.82
NDRG4-227ENST00000564960 FHAD1B1AJZ9 1412 aa32.65■■■□□ 2.82
NDRG4-227ENST00000564960 GRIN2AQ12879 1464 aa32.65■■■□□ 2.82
NDRG4-227ENST00000564960 CYB5RLQ6IPT4 315 aa32.56■■■□□ 2.8
NDRG4-227ENST00000564960 ARAP1Q96P48 1450 aa32.55■■■□□ 2.8
NDRG4-227ENST00000564960 NUP160Q12769 1436 aa32.51■■■□□ 2.8
NDRG4-227ENST00000564960 KIF27Q86VH2 1401 aa32.51■■■□□ 2.79
NDRG4-227ENST00000564960 CEP170Q5SW79 1584 aa32.48■■■□□ 2.79
NDRG4-227ENST00000564960 IGF1RP08069 1367 aa32.4■■■□□ 2.78
NDRG4-227ENST00000564960 CUL7Q14999 1698 aa32.34■■■□□ 2.77
NDRG4-227ENST00000564960 SHROOM2Q13796 1616 aa32.3■■■□□ 2.76
NDRG4-227ENST00000564960 ERCC6L2Q5T890 1561 aa32.24■■■□□ 2.75
NDRG4-227ENST00000564960 RUSC2Q8N2Y8 1516 aa32.22■■■□□ 2.75
NDRG4-227ENST00000564960 CARMIL1Q5VZK9 1371 aa32.2■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms