RNA–Protein interactions for RNA: ENST00000564953.1

PPCDC-207, Transcript of phosphopantothenoylcysteine decarboxylase, humanhuman

TSL 2

Gene PPCDC, Length 489 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPCDC-207ENST00000564953 NISCHQ9Y2I1 1504 aa22.85■■□□□ 1.25
PPCDC-207ENST00000564953 CCDC180Q9P1Z9 1646 aa20.45■□□□□ 0.87
PPCDC-207ENST00000564953 ABCC9O60706 1549 aa20.09■□□□□ 0.81
PPCDC-207ENST00000564953 RB1CC1Q8TDY2 1594 aa19.35■□□□□ 0.69
PPCDC-207ENST00000564953 NACADO15069 1562 aa19.32■□□□□ 0.68
PPCDC-207ENST00000564953 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
PPCDC-207ENST00000564953 DCAF1Q9Y4B6 1507 aa19.02■□□□□ 0.64
PPCDC-207ENST00000564953 ZCCHC6Q5VYS8 1495 aaKnown RBP18.99■□□□□ 0.63
PPCDC-207ENST00000564953 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
PPCDC-207ENST00000564953 UNC13AQ9UPW8 1703 aa18.79■□□□□ 0.6
PPCDC-207ENST00000564953 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
PPCDC-207ENST00000564953 SHROOM4Q9ULL8 1493 aa18.72■□□□□ 0.59
PPCDC-207ENST00000564953 PABPN1Q86U42 306 aaKnown RBP eCLIP18.69■□□□□ 0.58
PPCDC-207ENST00000564953 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
PPCDC-207ENST00000564953 SCRIBQ14160 1630 aa18.47■□□□□ 0.55
PPCDC-207ENST00000564953 EIF4G1Q04637 1599 aaKnown RBP18.26■□□□□ 0.51
PPCDC-207ENST00000564953 CC2D2AQ9P2K1 1620 aa18.21■□□□□ 0.51
PPCDC-207ENST00000564953 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
PPCDC-207ENST00000564953 NCAPD3P42695 1498 aa17.84■□□□□ 0.45
PPCDC-207ENST00000564953 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
PPCDC-207ENST00000564953 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
PPCDC-207ENST00000564953 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
PPCDC-207ENST00000564953 SMARCA4P51532 1647 aa17.74■□□□□ 0.43
PPCDC-207ENST00000564953 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
PPCDC-207ENST00000564953 PEG3Q9GZU2 1588 aa17.69■□□□□ 0.42
PPCDC-207ENST00000564953 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
PPCDC-207ENST00000564953 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
PPCDC-207ENST00000564953 CUX2O14529 1486 aa17.4■□□□□ 0.38
PPCDC-207ENST00000564953 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
PPCDC-207ENST00000564953 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
PPCDC-207ENST00000564953 NESP48681 1621 aa17.3■□□□□ 0.36
PPCDC-207ENST00000564953 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
PPCDC-207ENST00000564953 WIZO95785 1651 aa17.27■□□□□ 0.36
PPCDC-207ENST00000564953 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
PPCDC-207ENST00000564953 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
PPCDC-207ENST00000564953 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
PPCDC-207ENST00000564953 THOC2Q8NI27 1593 aaKnown RBP17.17■□□□□ 0.34
PPCDC-207ENST00000564953 CFTRP13569 1480 aa17.12■□□□□ 0.33
PPCDC-207ENST00000564953 DNAJC5Q9H3Z4 198 aa17.11■□□□□ 0.33
PPCDC-207ENST00000564953 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
PPCDC-207ENST00000564953 MRC2Q9UBG0 1479 aa17.06■□□□□ 0.32
PPCDC-207ENST00000564953 WDR62O43379 1518 aa17.04■□□□□ 0.32
PPCDC-207ENST00000564953 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.32
PPCDC-207ENST00000564953 CEP164Q9UPV0 1460 aa17.02■□□□□ 0.32
PPCDC-207ENST00000564953 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
PPCDC-207ENST00000564953 PRDM2Q13029 1718 aa16.9■□□□□ 0.3
PPCDC-207ENST00000564953 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
PPCDC-207ENST00000564953 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
PPCDC-207ENST00000564953 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
PPCDC-207ENST00000564953 TOPBP1Q92547 1522 aa16.71■□□□□ 0.27
PPCDC-207ENST00000564953 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
PPCDC-207ENST00000564953 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
PPCDC-207ENST00000564953 TARBP1Q13395 1621 aaKnown RBP16.56■□□□□ 0.24
PPCDC-207ENST00000564953 ZNF608Q9ULD9 1512 aaPredicted RBP16.56■□□□□ 0.24
PPCDC-207ENST00000564953 POLA1P09884 1462 aaPredicted RBP16.56■□□□□ 0.24
PPCDC-207ENST00000564953 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
PPCDC-207ENST00000564953 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
PPCDC-207ENST00000564953 SUPT5HO00267 1087 aaKnown RBP16.49■□□□□ 0.23
PPCDC-207ENST00000564953 SOGA1O94964 1423 aa16.48■□□□□ 0.23
PPCDC-207ENST00000564953 CUX1P39880 1505 aa16.47■□□□□ 0.23
PPCDC-207ENST00000564953 FGD5Q6ZNL6 1462 aa16.45■□□□□ 0.22
PPCDC-207ENST00000564953 AQRO60306 1485 aaKnown RBP eCLIP16.44■□□□□ 0.22
PPCDC-207ENST00000564953 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
PPCDC-207ENST00000564953 MAGI1Q96QZ7 1491 aaPredicted RBP16.37■□□□□ 0.21
PPCDC-207ENST00000564953 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
PPCDC-207ENST00000564953 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
PPCDC-207ENST00000564953 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
PPCDC-207ENST00000564953 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.2
PPCDC-207ENST00000564953 TOP2BQ02880 1626 aa16.31■□□□□ 0.2
PPCDC-207ENST00000564953 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
PPCDC-207ENST00000564953 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
PPCDC-207ENST00000564953 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
PPCDC-207ENST00000564953 CHD1O14646 1710 aa16.29■□□□□ 0.2
PPCDC-207ENST00000564953 ARHGEF11O15085 1522 aa16.29■□□□□ 0.2
PPCDC-207ENST00000564953 SYNJ2O15056 1496 aa16.29■□□□□ 0.2
PPCDC-207ENST00000564953 ABCA5Q8WWZ7 1642 aa16.27■□□□□ 0.2
PPCDC-207ENST00000564953 RIMBP3CA6NJZ7 1639 aa16.27■□□□□ 0.19
PPCDC-207ENST00000564953 RIMBP3BA6NNM3 1639 aa16.27■□□□□ 0.19
PPCDC-207ENST00000564953 RIMBP3Q9UFD9 1639 aa16.27■□□□□ 0.19
PPCDC-207ENST00000564953 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
PPCDC-207ENST00000564953 CHMP7Q8WUX9 453 aaPredicted RBP16.24■□□□□ 0.19
PPCDC-207ENST00000564953 SYNJ1O43426 1573 aa16.23■□□□□ 0.19
PPCDC-207ENST00000564953 FBLN2P98095 1184 aa16.23■□□□□ 0.19
PPCDC-207ENST00000564953 CLASP1Q7Z460 1538 aa16.22■□□□□ 0.19
PPCDC-207ENST00000564953 PBRM1Q86U86 1689 aa16.21■□□□□ 0.18
PPCDC-207ENST00000564953 ERICH3Q5RHP9 1530 aa16.17■□□□□ 0.18
PPCDC-207ENST00000564953 FHAD1B1AJZ9 1412 aa16.13■□□□□ 0.17
PPCDC-207ENST00000564953 GRIN2AQ12879 1464 aa16.13■□□□□ 0.17
PPCDC-207ENST00000564953 ARAP1Q96P48 1450 aa16.12■□□□□ 0.17
PPCDC-207ENST00000564953 ADAMTS12P58397 1594 aa16.12■□□□□ 0.17
PPCDC-207ENST00000564953 NUP160Q12769 1436 aa16.11■□□□□ 0.17
PPCDC-207ENST00000564953 CYB5RLQ6IPT4 315 aa16.08■□□□□ 0.16
PPCDC-207ENST00000564953 KIF27Q86VH2 1401 aa16.02■□□□□ 0.15
PPCDC-207ENST00000564953 CEP170Q5SW79 1584 aa16■□□□□ 0.15
PPCDC-207ENST00000564953 SHROOM2Q13796 1616 aa15.99■□□□□ 0.15
PPCDC-207ENST00000564953 IGF1RP08069 1367 aa15.97■□□□□ 0.15
PPCDC-207ENST00000564953 CUL7Q14999 1698 aa15.94■□□□□ 0.14
PPCDC-207ENST00000564953 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
PPCDC-207ENST00000564953 KIAA0586Q9BVV6 1533 aa15.89■□□□□ 0.13
PPCDC-207ENST00000564953 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms