RNA–Protein interactions for RNA: ENST00000564951.1

NEIL1-207, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 2

Gene NEIL1, Length 939 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-207ENST00000564951 NISCHQ9Y2I1 1504 aa35.4■■■■□ 3.26
NEIL1-207ENST00000564951 ABCC9O60706 1549 aa32.48■■■□□ 2.79
NEIL1-207ENST00000564951 CCDC180Q9P1Z9 1646 aa32.16■■■□□ 2.74
NEIL1-207ENST00000564951 DNAJC5BQ9UF47 199 aa30.87■■■□□ 2.53
NEIL1-207ENST00000564951 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
NEIL1-207ENST00000564951 NACADO15069 1562 aa30.4■■■□□ 2.46
NEIL1-207ENST00000564951 UNC13AQ9UPW8 1703 aa30.27■■■□□ 2.44
NEIL1-207ENST00000564951 PABPN1Q86U42 306 aaKnown RBP eCLIP30.02■■■□□ 2.4
NEIL1-207ENST00000564951 BICRAQ9NZM4 1560 aa29.95■■■□□ 2.39
NEIL1-207ENST00000564951 MYO15BQ96JP2 1530 aa29.83■■■□□ 2.37
NEIL1-207ENST00000564951 DCAF8L2P0C7V8 631 aa29.79■■■□□ 2.36
NEIL1-207ENST00000564951 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
NEIL1-207ENST00000564951 CC2D2AQ9P2K1 1620 aa29.41■■■□□ 2.3
NEIL1-207ENST00000564951 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
NEIL1-207ENST00000564951 ZCCHC6Q5VYS8 1495 aaKnown RBP29.28■■■□□ 2.28
NEIL1-207ENST00000564951 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
NEIL1-207ENST00000564951 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
NEIL1-207ENST00000564951 SCRIBQ14160 1630 aa29.18■■■□□ 2.26
NEIL1-207ENST00000564951 DNAJC5Q9H3Z4 198 aa28.7■■■□□ 2.18
NEIL1-207ENST00000564951 CUX2O14529 1486 aa28.25■■■□□ 2.11
NEIL1-207ENST00000564951 ERCC6Q03468 1493 aa28.05■■■□□ 2.08
NEIL1-207ENST00000564951 NCAPD3P42695 1498 aa28.02■■■□□ 2.08
NEIL1-207ENST00000564951 ATAD2BQ9ULI0 1458 aa27.87■■■□□ 2.05
NEIL1-207ENST00000564951 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
NEIL1-207ENST00000564951 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
NEIL1-207ENST00000564951 NESP48681 1621 aa27.79■■■□□ 2.04
NEIL1-207ENST00000564951 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
NEIL1-207ENST00000564951 THOC2Q8NI27 1593 aaKnown RBP27.75■■■□□ 2.03
NEIL1-207ENST00000564951 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
NEIL1-207ENST00000564951 PEG3Q9GZU2 1588 aa27.56■■■□□ 2
NEIL1-207ENST00000564951 KIF21AQ7Z4S6 1674 aa27.56■■■□□ 2
NEIL1-207ENST00000564951 LAMC3Q9Y6N6 1575 aa27.55■■■□□ 2
NEIL1-207ENST00000564951 BAZ1AQ9NRL2 1556 aaPredicted RBP27.53■■■□□ 2
NEIL1-207ENST00000564951 MROH2BQ7Z745 1585 aa27.28■■□□□ 1.96
NEIL1-207ENST00000564951 PDS5BQ9NTI5 1447 aa27.26■■□□□ 1.95
NEIL1-207ENST00000564951 WDR62O43379 1518 aa27.18■■□□□ 1.94
NEIL1-207ENST00000564951 MRC2Q9UBG0 1479 aa27.15■■□□□ 1.94
NEIL1-207ENST00000564951 TRIM41Q8WV44 630 aa27.15■■□□□ 1.94
NEIL1-207ENST00000564951 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
NEIL1-207ENST00000564951 WIZO95785 1651 aa26.98■■□□□ 1.91
NEIL1-207ENST00000564951 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
NEIL1-207ENST00000564951 FANCD2Q9BXW9 1451 aa26.84■■□□□ 1.89
NEIL1-207ENST00000564951 CFTRP13569 1480 aa26.74■■□□□ 1.87
NEIL1-207ENST00000564951 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.87
NEIL1-207ENST00000564951 PRDM2Q13029 1718 aa26.68■■□□□ 1.86
NEIL1-207ENST00000564951 OSCARQ8IYS5 282 aa26.67■■□□□ 1.86
NEIL1-207ENST00000564951 RIMBP3CA6NJZ7 1639 aa26.65■■□□□ 1.86
NEIL1-207ENST00000564951 RIMBP3BA6NNM3 1639 aa26.65■■□□□ 1.86
NEIL1-207ENST00000564951 RIMBP3Q9UFD9 1639 aa26.65■■□□□ 1.86
NEIL1-207ENST00000564951 TOP2AP11388 1531 aaKnown RBP26.59■■□□□ 1.85
NEIL1-207ENST00000564951 ARHGEF11O15085 1522 aa26.47■■□□□ 1.83
NEIL1-207ENST00000564951 RSF1Q96T23 1441 aaPredicted RBP26.46■■□□□ 1.83
NEIL1-207ENST00000564951 ZNF608Q9ULD9 1512 aaPredicted RBP26.44■■□□□ 1.82
NEIL1-207ENST00000564951 IFT140Q96RY7 1462 aa26.39■■□□□ 1.82
NEIL1-207ENST00000564951 EIF4G3O43432 1585 aaKnown RBP26.37■■□□□ 1.81
NEIL1-207ENST00000564951 CHD1O14646 1710 aa26.32■■□□□ 1.8
NEIL1-207ENST00000564951 TOPBP1Q92547 1522 aa26.31■■□□□ 1.8
NEIL1-207ENST00000564951 CCDC88BA6NC98 1476 aa26.2■■□□□ 1.78
NEIL1-207ENST00000564951 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
NEIL1-207ENST00000564951 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.78
NEIL1-207ENST00000564951 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
NEIL1-207ENST00000564951 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
NEIL1-207ENST00000564951 CYB5RLQ6IPT4 315 aa26.08■■□□□ 1.77
NEIL1-207ENST00000564951 AQRO60306 1485 aaKnown RBP eCLIP26.06■■□□□ 1.76
NEIL1-207ENST00000564951 POLA1P09884 1462 aaPredicted RBP26■■□□□ 1.75
NEIL1-207ENST00000564951 CLASP1Q7Z460 1538 aa25.95■■□□□ 1.74
NEIL1-207ENST00000564951 TRHP20396 242 aaPredicted RBP25.92■■□□□ 1.74
NEIL1-207ENST00000564951 WDR97A6NE52 1622 aa25.88■■□□□ 1.73
NEIL1-207ENST00000564951 RAD54L2Q9Y4B4 1467 aa25.86■■□□□ 1.73
NEIL1-207ENST00000564951 SNAPC4Q5SXM2 1469 aa25.85■■□□□ 1.73
NEIL1-207ENST00000564951 FBLN2P98095 1184 aa25.84■■□□□ 1.73
NEIL1-207ENST00000564951 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
NEIL1-207ENST00000564951 TDRD9Q8NDG6 1382 aaKnown RBP25.78■■□□□ 1.72
NEIL1-207ENST00000564951 SOGA1O94964 1423 aa25.76■■□□□ 1.71
NEIL1-207ENST00000564951 MAGI1Q96QZ7 1491 aaPredicted RBP25.76■■□□□ 1.71
NEIL1-207ENST00000564951 FGD5Q6ZNL6 1462 aa25.75■■□□□ 1.71
NEIL1-207ENST00000564951 PBRM1Q86U86 1689 aa25.72■■□□□ 1.71
NEIL1-207ENST00000564951 CUX1P39880 1505 aa25.68■■□□□ 1.7
NEIL1-207ENST00000564951 SYNJ2O15056 1496 aa25.66■■□□□ 1.7
NEIL1-207ENST00000564951 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
NEIL1-207ENST00000564951 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
NEIL1-207ENST00000564951 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
NEIL1-207ENST00000564951 ABCA5Q8WWZ7 1642 aa25.56■■□□□ 1.68
NEIL1-207ENST00000564951 AEBP2Q6ZN18 517 aaPredicted RBP25.53■■□□□ 1.68
NEIL1-207ENST00000564951 ERCC6L2Q5T890 1561 aa25.48■■□□□ 1.67
NEIL1-207ENST00000564951 ABCA10Q8WWZ4 1543 aa25.43■■□□□ 1.66
NEIL1-207ENST00000564951 KIF13AQ9H1H9 1805 aa25.39■■□□□ 1.65
NEIL1-207ENST00000564951 ADAMTS12P58397 1594 aa25.39■■□□□ 1.65
NEIL1-207ENST00000564951 CEP170Q5SW79 1584 aa25.39■■□□□ 1.65
NEIL1-207ENST00000564951 SHROOM2Q13796 1616 aa25.38■■□□□ 1.65
NEIL1-207ENST00000564951 GRIN2AQ12879 1464 aa25.38■■□□□ 1.65
NEIL1-207ENST00000564951 NUP160Q12769 1436 aa25.31■■□□□ 1.64
NEIL1-207ENST00000564951 BIVM-ERCC5R4GMW8 1640 aa25.21■■□□□ 1.63
NEIL1-207ENST00000564951 TOP2BQ02880 1626 aa25.15■■□□□ 1.62
NEIL1-207ENST00000564951 WRNQ14191 1432 aaPredicted RBP eCLIP25.14■■□□□ 1.62
NEIL1-207ENST00000564951 FHAD1B1AJZ9 1412 aa25.13■■□□□ 1.61
NEIL1-207ENST00000564951 ERICH3Q5RHP9 1530 aa25.12■■□□□ 1.61
NEIL1-207ENST00000564951 RUSC2Q8N2Y8 1516 aa25.07■■□□□ 1.6
NEIL1-207ENST00000564951 DIP2BQ9P265 1576 aa25.03■■□□□ 1.6
NEIL1-207ENST00000564951 PRG4Q92954 1404 aaPredicted RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms