RNA–Protein interactions for RNA: ENST00000564934.1

RPAP1-206, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-206ENST00000564934 NISCHQ9Y2I1 1504 aa33.79■■■■□ 3
RPAP1-206ENST00000564934 ABCC9O60706 1549 aa31.59■■■□□ 2.65
RPAP1-206ENST00000564934 CCDC180Q9P1Z9 1646 aa30.67■■■□□ 2.5
RPAP1-206ENST00000564934 DNAJC5BQ9UF47 199 aa30.41■■■□□ 2.46
RPAP1-206ENST00000564934 RB1CC1Q8TDY2 1594 aa29.63■■■□□ 2.33
RPAP1-206ENST00000564934 PABPN1Q86U42 306 aaKnown RBP eCLIP29.28■■■□□ 2.28
RPAP1-206ENST00000564934 NACADO15069 1562 aa29.21■■■□□ 2.27
RPAP1-206ENST00000564934 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
RPAP1-206ENST00000564934 DCAF8L2P0C7V8 631 aa28.93■■■□□ 2.22
RPAP1-206ENST00000564934 BICRAQ9NZM4 1560 aa28.82■■■□□ 2.2
RPAP1-206ENST00000564934 CECR2Q9BXF3 1484 aa28.54■■■□□ 2.16
RPAP1-206ENST00000564934 DNAJC5Q9H3Z4 198 aa28.53■■■□□ 2.16
RPAP1-206ENST00000564934 MYO15BQ96JP2 1530 aa28.51■■■□□ 2.15
RPAP1-206ENST00000564934 CC2D2AQ9P2K1 1620 aa28.47■■■□□ 2.15
RPAP1-206ENST00000564934 SHROOM4Q9ULL8 1493 aa28.32■■■□□ 2.12
RPAP1-206ENST00000564934 EIF4G1Q04637 1599 aaKnown RBP28.19■■■□□ 2.1
RPAP1-206ENST00000564934 SCRIBQ14160 1630 aa27.96■■■□□ 2.07
RPAP1-206ENST00000564934 ZCCHC6Q5VYS8 1495 aaKnown RBP27.83■■■□□ 2.04
RPAP1-206ENST00000564934 DCAF1Q9Y4B6 1507 aa27.82■■■□□ 2.04
RPAP1-206ENST00000564934 CUX2O14529 1486 aa27.55■■■□□ 2
RPAP1-206ENST00000564934 ERCC6Q03468 1493 aa27.34■■□□□ 1.97
RPAP1-206ENST00000564934 NCAPD3P42695 1498 aa26.99■■□□□ 1.91
RPAP1-206ENST00000564934 TRIM41Q8WV44 630 aa26.96■■□□□ 1.91
RPAP1-206ENST00000564934 NESP48681 1621 aa26.89■■□□□ 1.9
RPAP1-206ENST00000564934 ATAD2BQ9ULI0 1458 aa26.8■■□□□ 1.88
RPAP1-206ENST00000564934 THOC2Q8NI27 1593 aaKnown RBP26.77■■□□□ 1.88
RPAP1-206ENST00000564934 HMGXB3Q12766 1538 aa26.71■■□□□ 1.87
RPAP1-206ENST00000564934 SMARCA2P51531 1590 aa26.66■■□□□ 1.86
RPAP1-206ENST00000564934 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
RPAP1-206ENST00000564934 LAMC3Q9Y6N6 1575 aa26.5■■□□□ 1.83
RPAP1-206ENST00000564934 BAZ1BQ9UIG0 1483 aaKnown RBP26.5■■□□□ 1.83
RPAP1-206ENST00000564934 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
RPAP1-206ENST00000564934 PDS5BQ9NTI5 1447 aa26.4■■□□□ 1.82
RPAP1-206ENST00000564934 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
RPAP1-206ENST00000564934 PEG3Q9GZU2 1588 aa26.27■■□□□ 1.8
RPAP1-206ENST00000564934 MRC2Q9UBG0 1479 aa26.24■■□□□ 1.79
RPAP1-206ENST00000564934 WDR62O43379 1518 aa26.2■■□□□ 1.79
RPAP1-206ENST00000564934 OSCARQ8IYS5 282 aa26.15■■□□□ 1.78
RPAP1-206ENST00000564934 CADPSQ9ULU8 1353 aa26.14■■□□□ 1.78
RPAP1-206ENST00000564934 MROH2BQ7Z745 1585 aa26.05■■□□□ 1.76
RPAP1-206ENST00000564934 CEP164Q9UPV0 1460 aa25.97■■□□□ 1.75
RPAP1-206ENST00000564934 RIMBP3CA6NJZ7 1639 aa25.92■■□□□ 1.74
RPAP1-206ENST00000564934 RIMBP3BA6NNM3 1639 aa25.92■■□□□ 1.74
RPAP1-206ENST00000564934 RIMBP3Q9UFD9 1639 aa25.92■■□□□ 1.74
RPAP1-206ENST00000564934 FANCD2Q9BXW9 1451 aa25.85■■□□□ 1.73
RPAP1-206ENST00000564934 ARHGEF11O15085 1522 aa25.75■■□□□ 1.71
RPAP1-206ENST00000564934 URB2Q14146 1524 aaKnown RBP25.71■■□□□ 1.71
RPAP1-206ENST00000564934 WIZO95785 1651 aa25.68■■□□□ 1.7
RPAP1-206ENST00000564934 CFTRP13569 1480 aa25.66■■□□□ 1.7
RPAP1-206ENST00000564934 TRHP20396 242 aaPredicted RBP25.62■■□□□ 1.69
RPAP1-206ENST00000564934 CYB5RLQ6IPT4 315 aa25.62■■□□□ 1.69
RPAP1-206ENST00000564934 ZNF608Q9ULD9 1512 aaPredicted RBP25.55■■□□□ 1.68
RPAP1-206ENST00000564934 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
RPAP1-206ENST00000564934 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
RPAP1-206ENST00000564934 ARAP1Q96P48 1450 aa25.45■■□□□ 1.66
RPAP1-206ENST00000564934 EIF4G3O43432 1585 aaKnown RBP25.35■■□□□ 1.65
RPAP1-206ENST00000564934 CHD1O14646 1710 aa25.31■■□□□ 1.64
RPAP1-206ENST00000564934 TOP2AP11388 1531 aaKnown RBP25.29■■□□□ 1.64
RPAP1-206ENST00000564934 RSF1Q96T23 1441 aaPredicted RBP25.29■■□□□ 1.64
RPAP1-206ENST00000564934 PRDM2Q13029 1718 aa25.28■■□□□ 1.64
RPAP1-206ENST00000564934 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
RPAP1-206ENST00000564934 FBLN2P98095 1184 aa25.22■■□□□ 1.63
RPAP1-206ENST00000564934 AQRO60306 1485 aaKnown RBP eCLIP25.2■■□□□ 1.62
RPAP1-206ENST00000564934 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
RPAP1-206ENST00000564934 TARBP1Q13395 1621 aaKnown RBP25.09■■□□□ 1.61
RPAP1-206ENST00000564934 DNMBPQ6XZF7 1577 aa25.09■■□□□ 1.61
RPAP1-206ENST00000564934 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
RPAP1-206ENST00000564934 CLASP1Q7Z460 1538 aa25■■□□□ 1.59
RPAP1-206ENST00000564934 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
RPAP1-206ENST00000564934 SNAPC4Q5SXM2 1469 aa24.92■■□□□ 1.58
RPAP1-206ENST00000564934 TDRD9Q8NDG6 1382 aaKnown RBP24.92■■□□□ 1.58
RPAP1-206ENST00000564934 SYNJ1O43426 1573 aa24.9■■□□□ 1.58
RPAP1-206ENST00000564934 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
RPAP1-206ENST00000564934 CHMP7Q8WUX9 453 aaPredicted RBP24.87■■□□□ 1.57
RPAP1-206ENST00000564934 SOGA1O94964 1423 aa24.82■■□□□ 1.56
RPAP1-206ENST00000564934 GAPVD1Q14C86 1478 aa24.81■■□□□ 1.56
RPAP1-206ENST00000564934 MAGI1Q96QZ7 1491 aaPredicted RBP24.79■■□□□ 1.56
RPAP1-206ENST00000564934 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
RPAP1-206ENST00000564934 SYNJ2O15056 1496 aa24.73■■□□□ 1.55
RPAP1-206ENST00000564934 GRIN2BQ13224 1484 aa24.7■■□□□ 1.55
RPAP1-206ENST00000564934 FGD5Q6ZNL6 1462 aa24.68■■□□□ 1.54
RPAP1-206ENST00000564934 ERCC6L2Q5T890 1561 aa24.58■■□□□ 1.52
RPAP1-206ENST00000564934 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
RPAP1-206ENST00000564934 CUX1P39880 1505 aa24.52■■□□□ 1.52
RPAP1-206ENST00000564934 ILDR1Q86SU0 546 aaPredicted RBP24.52■■□□□ 1.52
RPAP1-206ENST00000564934 KIF13AQ9H1H9 1805 aa24.47■■□□□ 1.51
RPAP1-206ENST00000564934 CEP170Q5SW79 1584 aa24.44■■□□□ 1.5
RPAP1-206ENST00000564934 GRIN2AQ12879 1464 aa24.39■■□□□ 1.5
RPAP1-206ENST00000564934 ABCA5Q8WWZ7 1642 aa24.38■■□□□ 1.49
RPAP1-206ENST00000564934 KDM4FA0A1W2PPD8 638 aa24.35■■□□□ 1.49
RPAP1-206ENST00000564934 NUP160Q12769 1436 aa24.35■■□□□ 1.49
RPAP1-206ENST00000564934 ABCA10Q8WWZ4 1543 aa24.34■■□□□ 1.49
RPAP1-206ENST00000564934 SHROOM2Q13796 1616 aa24.32■■□□□ 1.48
RPAP1-206ENST00000564934 FAM69CQ0P6D2 419 aa24.29■■□□□ 1.48
RPAP1-206ENST00000564934 ADAMTS12P58397 1594 aa24.27■■□□□ 1.48
RPAP1-206ENST00000564934 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
RPAP1-206ENST00000564934 KDM6BO15054 1643 aa24.2■■□□□ 1.46
RPAP1-206ENST00000564934 PRG4Q92954 1404 aaPredicted RBP24.18■■□□□ 1.46
RPAP1-206ENST00000564934 DIP2BQ9P265 1576 aa24.16■■□□□ 1.46
RPAP1-206ENST00000564934 FHAD1B1AJZ9 1412 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms