RNA–Protein interactions for RNA: ENST00000564905.1

XPO6-206, Transcript of exportin 6, humanhuman

TSL 3

Gene XPO6, Length 835 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPO6-206ENST00000564905 NISCHQ9Y2I1 1504 aa31.72■■■□□ 2.67
XPO6-206ENST00000564905 ABCC9O60706 1549 aa29.03■■■□□ 2.24
XPO6-206ENST00000564905 CCDC180Q9P1Z9 1646 aa28.51■■■□□ 2.15
XPO6-206ENST00000564905 DNAJC5BQ9UF47 199 aa27.6■■■□□ 2.01
XPO6-206ENST00000564905 RB1CC1Q8TDY2 1594 aa27.32■■□□□ 1.96
XPO6-206ENST00000564905 DCAF8L2P0C7V8 631 aa27.05■■□□□ 1.92
XPO6-206ENST00000564905 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.924e-6■■□□□ 11.7
XPO6-206ENST00000564905 NACADO15069 1562 aa27.02■■□□□ 1.92
XPO6-206ENST00000564905 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
XPO6-206ENST00000564905 BICRAQ9NZM4 1560 aa26.67■■□□□ 1.86
XPO6-206ENST00000564905 MYO15BQ96JP2 1530 aa26.45■■□□□ 1.83
XPO6-206ENST00000564905 ZCCHC6Q5VYS8 1495 aaKnown RBP26.22■■□□□ 1.79
XPO6-206ENST00000564905 SCRIBQ14160 1630 aa26.15■■□□□ 1.78
XPO6-206ENST00000564905 CC2D2AQ9P2K1 1620 aa26.15■■□□□ 1.78
XPO6-206ENST00000564905 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
XPO6-206ENST00000564905 DCAF1Q9Y4B6 1507 aa26.05■■□□□ 1.76
XPO6-206ENST00000564905 SHROOM4Q9ULL8 1493 aa25.99■■□□□ 1.75
XPO6-206ENST00000564905 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
XPO6-206ENST00000564905 DNAJC5Q9H3Z4 198 aa25.4■■□□□ 1.66
XPO6-206ENST00000564905 ERCC6Q03468 1493 aa24.99■■□□□ 1.59
XPO6-206ENST00000564905 NCAPD3P42695 1498 aa24.98■■□□□ 1.59
XPO6-206ENST00000564905 CUX2O14529 1486 aa24.96■■□□□ 1.59
XPO6-206ENST00000564905 ATAD2BQ9ULI0 1458 aa24.93■■□□□ 1.58
XPO6-206ENST00000564905 NESP48681 1621 aa24.89■■□□□ 1.57
XPO6-206ENST00000564905 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
XPO6-206ENST00000564905 HMGXB3Q12766 1538 aa24.75■■□□□ 1.55
XPO6-206ENST00000564905 SMARCA2P51531 1590 aa24.75■■□□□ 1.55
XPO6-206ENST00000564905 BAZ1BQ9UIG0 1483 aaKnown RBP24.65■■□□□ 1.54
XPO6-206ENST00000564905 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
XPO6-206ENST00000564905 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
XPO6-206ENST00000564905 MROH2BQ7Z745 1585 aa24.53■■□□□ 1.52
XPO6-206ENST00000564905 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
XPO6-206ENST00000564905 PEG3Q9GZU2 1588 aa24.5■■□□□ 1.51
XPO6-206ENST00000564905 LAMC3Q9Y6N6 1575 aa24.45■■□□□ 1.5
XPO6-206ENST00000564905 PDS5BQ9NTI5 1447 aa24.31■■□□□ 1.48
XPO6-206ENST00000564905 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
XPO6-206ENST00000564905 CADPSQ9ULU8 1353 aa24.24■■□□□ 1.47
XPO6-206ENST00000564905 WIZO95785 1651 aa24.24■■□□□ 1.47
XPO6-206ENST00000564905 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
XPO6-206ENST00000564905 WDR62O43379 1518 aa24.14■■□□□ 1.45
XPO6-206ENST00000564905 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
XPO6-206ENST00000564905 FANCD2Q9BXW9 1451 aa24■■□□□ 1.43
XPO6-206ENST00000564905 CFTRP13569 1480 aa23.89■■□□□ 1.42
XPO6-206ENST00000564905 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.41
XPO6-206ENST00000564905 RSF1Q96T23 1441 aaPredicted RBP23.86■■□□□ 1.41
XPO6-206ENST00000564905 OSCARQ8IYS5 282 aa23.82■■□□□ 1.4
XPO6-206ENST00000564905 TOP2AP11388 1531 aaKnown RBP23.8■■□□□ 1.4
XPO6-206ENST00000564905 ZNF608Q9ULD9 1512 aaPredicted RBP23.68■■□□□ 1.38
XPO6-206ENST00000564905 RIMBP3CA6NJZ7 1639 aa23.64■■□□□ 1.38
XPO6-206ENST00000564905 RIMBP3BA6NNM3 1639 aa23.64■■□□□ 1.38
XPO6-206ENST00000564905 RIMBP3Q9UFD9 1639 aa23.64■■□□□ 1.38
XPO6-206ENST00000564905 PRDM2Q13029 1718 aa23.61■■□□□ 1.37
XPO6-206ENST00000564905 CCDC88BA6NC98 1476 aa23.6■■□□□ 1.37
XPO6-206ENST00000564905 IFT140Q96RY7 1462 aa23.53■■□□□ 1.36
XPO6-206ENST00000564905 TOPBP1Q92547 1522 aa23.52■■□□□ 1.36
XPO6-206ENST00000564905 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
XPO6-206ENST00000564905 EIF4G3O43432 1585 aaKnown RBP23.47■■□□□ 1.35
XPO6-206ENST00000564905 AQRO60306 1485 aaKnown RBP eCLIP23.41■■□□□ 1.344e-7■■■■□ 20.7
XPO6-206ENST00000564905 CYB5RLQ6IPT4 315 aa23.39■■□□□ 1.33
XPO6-206ENST00000564905 CHD1O14646 1710 aa23.39■■□□□ 1.33
XPO6-206ENST00000564905 DNMBPQ6XZF7 1577 aa23.37■■□□□ 1.33
XPO6-206ENST00000564905 TARBP1Q13395 1621 aaKnown RBP23.35■■□□□ 1.33
XPO6-206ENST00000564905 FBLN2P98095 1184 aa23.31■■□□□ 1.32
XPO6-206ENST00000564905 ABCC8Q09428 1581 aa23.28■■□□□ 1.32
XPO6-206ENST00000564905 ARAP1Q96P48 1450 aa23.28■■□□□ 1.32
XPO6-206ENST00000564905 POLA1P09884 1462 aaPredicted RBP23.27■■□□□ 1.32
XPO6-206ENST00000564905 RAD54L2Q9Y4B4 1467 aa23.27■■□□□ 1.32
XPO6-206ENST00000564905 TRHP20396 242 aaPredicted RBP23.22■■□□□ 1.31
XPO6-206ENST00000564905 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
XPO6-206ENST00000564905 SOGA1O94964 1423 aa23.14■■□□□ 1.29
XPO6-206ENST00000564905 SNAPC4Q5SXM2 1469 aa23.12■■□□□ 1.29
XPO6-206ENST00000564905 FGD5Q6ZNL6 1462 aa23.1■■□□□ 1.29
XPO6-206ENST00000564905 CUX1P39880 1505 aa23.05■■□□□ 1.28
XPO6-206ENST00000564905 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
XPO6-206ENST00000564905 CHMP7Q8WUX9 453 aaPredicted RBP23■■□□□ 1.27
XPO6-206ENST00000564905 SYNJ1O43426 1573 aa22.94■■□□□ 1.26
XPO6-206ENST00000564905 GRIN2BQ13224 1484 aa22.93■■□□□ 1.26
XPO6-206ENST00000564905 MAGI1Q96QZ7 1491 aaPredicted RBP22.93■■□□□ 1.26
XPO6-206ENST00000564905 WDR97A6NE52 1622 aa22.92■■□□□ 1.26
XPO6-206ENST00000564905 SYNJ2O15056 1496 aa22.9■■□□□ 1.26
XPO6-206ENST00000564905 PBRM1Q86U86 1689 aa22.88■■□□□ 1.25
XPO6-206ENST00000564905 GAPVD1Q14C86 1478 aa22.84■■□□□ 1.25
XPO6-206ENST00000564905 ERCC6L2Q5T890 1561 aa22.81■■□□□ 1.24
XPO6-206ENST00000564905 ABCA5Q8WWZ7 1642 aa22.78■■□□□ 1.24
XPO6-206ENST00000564905 ABCA10Q8WWZ4 1543 aa22.74■■□□□ 1.23
XPO6-206ENST00000564905 AEBP2Q6ZN18 517 aaPredicted RBP22.71■■□□□ 1.23
XPO6-206ENST00000564905 SUPT5HO00267 1087 aaKnown RBP22.68■■□□□ 1.22
XPO6-206ENST00000564905 GRIN2AQ12879 1464 aa22.67■■□□□ 1.22
XPO6-206ENST00000564905 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
XPO6-206ENST00000564905 ADAMTS12P58397 1594 aa22.64■■□□□ 1.22
XPO6-206ENST00000564905 NUP160Q12769 1436 aa22.58■■□□□ 1.21
XPO6-206ENST00000564905 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
XPO6-206ENST00000564905 SHROOM2Q13796 1616 aa22.53■■□□□ 1.2
XPO6-206ENST00000564905 TOP2BQ02880 1626 aa22.52■■□□□ 1.2
XPO6-206ENST00000564905 BIVM-ERCC5R4GMW8 1640 aa22.52■■□□□ 1.2
XPO6-206ENST00000564905 FHAD1B1AJZ9 1412 aa22.5■■□□□ 1.19
XPO6-206ENST00000564905 KIF13AQ9H1H9 1805 aa22.47■■□□□ 1.19
XPO6-206ENST00000564905 PRG4Q92954 1404 aaPredicted RBP22.44■■□□□ 1.18
XPO6-206ENST00000564905 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
XPO6-206ENST00000564905 JPH4Q96JJ6 628 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms