RNA–Protein interactions for RNA: ENST00000564864.5

MMP2-204, Transcript of matrix metallopeptidase 2, humanhuman

TSL 4

Gene MMP2, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-204ENST00000564864 NISCHQ9Y2I1 1504 aa25.48■■□□□ 1.67
MMP2-204ENST00000564864 CCDC180Q9P1Z9 1646 aa22.52■■□□□ 1.2
MMP2-204ENST00000564864 ZCCHC6Q5VYS8 1495 aaKnown RBP21.35■■□□□ 1.01
MMP2-204ENST00000564864 ABCC9O60706 1549 aa21.31■■□□□ 1
MMP2-204ENST00000564864 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
MMP2-204ENST00000564864 DCAF8L2P0C7V8 631 aa21.13■□□□□ 0.97
MMP2-204ENST00000564864 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
MMP2-204ENST00000564864 NACADO15069 1562 aa21.02■□□□□ 0.96
MMP2-204ENST00000564864 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
MMP2-204ENST00000564864 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
MMP2-204ENST00000564864 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
MMP2-204ENST00000564864 UNC13AQ9UPW8 1703 aa20.3■□□□□ 0.84
MMP2-204ENST00000564864 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
MMP2-204ENST00000564864 BICRAQ9NZM4 1560 aa20.04■□□□□ 0.8
MMP2-204ENST00000564864 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
MMP2-204ENST00000564864 BAZ1AQ9NRL2 1556 aaPredicted RBP19.82■□□□□ 0.76
MMP2-204ENST00000564864 SMARCA4P51532 1647 aa19.67■□□□□ 0.74
MMP2-204ENST00000564864 CECR2Q9BXF3 1484 aa19.66■□□□□ 0.74
MMP2-204ENST00000564864 SUPT5HO00267 1087 aaKnown RBP19.62■□□□□ 0.73
MMP2-204ENST00000564864 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
MMP2-204ENST00000564864 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
MMP2-204ENST00000564864 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
MMP2-204ENST00000564864 SMARCA2P51531 1590 aa19.52■□□□□ 0.71
MMP2-204ENST00000564864 PEG3Q9GZU2 1588 aa19.48■□□□□ 0.71
MMP2-204ENST00000564864 WIZO95785 1651 aa19.43■□□□□ 0.7
MMP2-204ENST00000564864 ATAD2BQ9ULI0 1458 aa19.37■□□□□ 0.69
MMP2-204ENST00000564864 BAZ1BQ9UIG0 1483 aaKnown RBP19.35■□□□□ 0.69
MMP2-204ENST00000564864 TOP2AP11388 1531 aaKnown RBP19.34■□□□□ 0.69
MMP2-204ENST00000564864 CC2D2AQ9P2K1 1620 aa19.33■□□□□ 0.69
MMP2-204ENST00000564864 HMGXB3Q12766 1538 aa19.32■□□□□ 0.68
MMP2-204ENST00000564864 NCAPD3P42695 1498 aa19.3■□□□□ 0.68
MMP2-204ENST00000564864 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
MMP2-204ENST00000564864 PRDM2Q13029 1718 aa18.82■□□□□ 0.6
MMP2-204ENST00000564864 LAMC3Q9Y6N6 1575 aa18.8■□□□□ 0.6
MMP2-204ENST00000564864 CADPSQ9ULU8 1353 aa18.8■□□□□ 0.6
MMP2-204ENST00000564864 CFTRP13569 1480 aa18.78■□□□□ 0.6
MMP2-204ENST00000564864 DNAJC5Q9H3Z4 198 aa18.78■□□□□ 0.6
MMP2-204ENST00000564864 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
MMP2-204ENST00000564864 TRIM41Q8WV44 630 aa18.6■□□□□ 0.57
MMP2-204ENST00000564864 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
MMP2-204ENST00000564864 FANCD2Q9BXW9 1451 aa18.58■□□□□ 0.56
MMP2-204ENST00000564864 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
MMP2-204ENST00000564864 CEP164Q9UPV0 1460 aa18.56■□□□□ 0.56
MMP2-204ENST00000564864 NESP48681 1621 aa18.54■□□□□ 0.56
MMP2-204ENST00000564864 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
MMP2-204ENST00000564864 ERCC6Q03468 1493 aa18.48■□□□□ 0.55
MMP2-204ENST00000564864 CUX2O14529 1486 aa18.46■□□□□ 0.54
MMP2-204ENST00000564864 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
MMP2-204ENST00000564864 KIF21AQ7Z4S6 1674 aa18.44■□□□□ 0.54
MMP2-204ENST00000564864 BIVM-ERCC5R4GMW8 1640 aa18.44■□□□□ 0.54
MMP2-204ENST00000564864 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
MMP2-204ENST00000564864 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
MMP2-204ENST00000564864 MRC2Q9UBG0 1479 aa18.37■□□□□ 0.53
MMP2-204ENST00000564864 CUX1P39880 1505 aa18.34■□□□□ 0.53
MMP2-204ENST00000564864 TOPBP1Q92547 1522 aa18.32■□□□□ 0.52
MMP2-204ENST00000564864 EEA1Q15075 1411 aa18.32■□□□□ 0.52
MMP2-204ENST00000564864 WDR62O43379 1518 aa18.26■□□□□ 0.51
MMP2-204ENST00000564864 URB2Q14146 1524 aaKnown RBP18.26■□□□□ 0.51
MMP2-204ENST00000564864 FGD5Q6ZNL6 1462 aa18.25■□□□□ 0.51
MMP2-204ENST00000564864 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
MMP2-204ENST00000564864 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
MMP2-204ENST00000564864 KIF27Q86VH2 1401 aa18.19■□□□□ 0.5
MMP2-204ENST00000564864 SOGA1O94964 1423 aa18.18■□□□□ 0.5
MMP2-204ENST00000564864 IFT140Q96RY7 1462 aa18.14■□□□□ 0.5
MMP2-204ENST00000564864 WDR97A6NE52 1622 aa18.14■□□□□ 0.49
MMP2-204ENST00000564864 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
MMP2-204ENST00000564864 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.48
MMP2-204ENST00000564864 CSRNP3Q8WYN3 585 aa18.07■□□□□ 0.48
MMP2-204ENST00000564864 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
MMP2-204ENST00000564864 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
MMP2-204ENST00000564864 GAPVD1Q14C86 1478 aa18■□□□□ 0.47
MMP2-204ENST00000564864 CUL7Q14999 1698 aa17.99■□□□□ 0.47
MMP2-204ENST00000564864 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
MMP2-204ENST00000564864 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
MMP2-204ENST00000564864 KIF21BO75037 1637 aa17.97■□□□□ 0.47
MMP2-204ENST00000564864 GOLGA3Q08378 1498 aa17.95■□□□□ 0.46
MMP2-204ENST00000564864 RUSC2Q8N2Y8 1516 aa17.94■□□□□ 0.46
MMP2-204ENST00000564864 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
MMP2-204ENST00000564864 TDRD9Q8NDG6 1382 aaKnown RBP17.93■□□□□ 0.46
MMP2-204ENST00000564864 GRIN2BQ13224 1484 aa17.93■□□□□ 0.46
MMP2-204ENST00000564864 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
MMP2-204ENST00000564864 IGF1RP08069 1367 aa17.89■□□□□ 0.45
MMP2-204ENST00000564864 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
MMP2-204ENST00000564864 RAPGEF2Q9Y4G8 1499 aa17.88■□□□□ 0.45
MMP2-204ENST00000564864 UBTFP17480 764 aaKnown RBP17.87■□□□□ 0.45
MMP2-204ENST00000564864 PRXQ9BXM0 1461 aa17.87■□□□□ 0.45
MMP2-204ENST00000564864 AQRO60306 1485 aaKnown RBP eCLIP17.85■□□□□ 0.45
MMP2-204ENST00000564864 MAGI1Q96QZ7 1491 aaPredicted RBP17.85■□□□□ 0.45
MMP2-204ENST00000564864 ZNF608Q9ULD9 1512 aaPredicted RBP17.83■□□□□ 0.45
MMP2-204ENST00000564864 FHAD1B1AJZ9 1412 aa17.82■□□□□ 0.44
MMP2-204ENST00000564864 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
MMP2-204ENST00000564864 TNIKQ9UKE5 1360 aa17.79■□□□□ 0.44
MMP2-204ENST00000564864 LOC105371045A0A1W2PR82 267 aa17.77■□□□□ 0.44
MMP2-204ENST00000564864 SNAPC4Q5SXM2 1469 aa17.75■□□□□ 0.43
MMP2-204ENST00000564864 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
MMP2-204ENST00000564864 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
MMP2-204ENST00000564864 CHMP7Q8WUX9 453 aaPredicted RBP17.73■□□□□ 0.43
MMP2-204ENST00000564864 CTTNBP2Q8WZ74 1663 aa17.71■□□□□ 0.43
MMP2-204ENST00000564864 FBLN2P98095 1184 aa17.66■□□□□ 0.42
MMP2-204ENST00000564864 GRIN2AQ12879 1464 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms