RNA–Protein interactions for RNA: ENST00000564842.1

CLEC18B-203, Transcript of C-type lectin domain family 18 member B, humanhuman

TSL 4

Gene CLEC18B, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLEC18B-203ENST00000564842 NISCHQ9Y2I1 1504 aa33.82■■■■□ 3
CLEC18B-203ENST00000564842 CCDC180Q9P1Z9 1646 aa30.23■■■□□ 2.43
CLEC18B-203ENST00000564842 ABCC9O60706 1549 aa30.22■■■□□ 2.43
CLEC18B-203ENST00000564842 RB1CC1Q8TDY2 1594 aa28.79■■■□□ 2.2
CLEC18B-203ENST00000564842 DCAF8L2P0C7V8 631 aa28.72■■■□□ 2.19
CLEC18B-203ENST00000564842 NACADO15069 1562 aa28.61■■■□□ 2.17
CLEC18B-203ENST00000564842 PABPN1Q86U42 306 aaKnown RBP eCLIP28.22■■■□□ 2.11
CLEC18B-203ENST00000564842 MYO15BQ96JP2 1530 aa28.22■■■□□ 2.11
CLEC18B-203ENST00000564842 DNAJC5BQ9UF47 199 aa28.21■■■□□ 2.11
CLEC18B-203ENST00000564842 UNC13AQ9UPW8 1703 aa28.04■■■□□ 2.08
CLEC18B-203ENST00000564842 ZCCHC6Q5VYS8 1495 aaKnown RBP28.02■■■□□ 2.08
CLEC18B-203ENST00000564842 DCAF1Q9Y4B6 1507 aa27.9■■■□□ 2.06
CLEC18B-203ENST00000564842 BICRAQ9NZM4 1560 aa27.87■■■□□ 2.05
CLEC18B-203ENST00000564842 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
CLEC18B-203ENST00000564842 SHROOM4Q9ULL8 1493 aa27.53■■■□□ 2
CLEC18B-203ENST00000564842 CC2D2AQ9P2K1 1620 aa27.25■■□□□ 1.95
CLEC18B-203ENST00000564842 EIF4G1Q04637 1599 aaKnown RBP27.22■■□□□ 1.95
CLEC18B-203ENST00000564842 CECR2Q9BXF3 1484 aa27.2■■□□□ 1.95
CLEC18B-203ENST00000564842 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
CLEC18B-203ENST00000564842 ATAD2BQ9ULI0 1458 aa26.36■■□□□ 1.81
CLEC18B-203ENST00000564842 SMARCA4P51532 1647 aa26.34■■□□□ 1.81
CLEC18B-203ENST00000564842 SMARCA2P51531 1590 aa26.3■■□□□ 1.8
CLEC18B-203ENST00000564842 BAZ1AQ9NRL2 1556 aaPredicted RBP26.25■■□□□ 1.79
CLEC18B-203ENST00000564842 HMGXB3Q12766 1538 aa26.2■■□□□ 1.79
CLEC18B-203ENST00000564842 BAZ1BQ9UIG0 1483 aaKnown RBP26.15■■□□□ 1.78
CLEC18B-203ENST00000564842 ERCC6Q03468 1493 aa26.13■■□□□ 1.77
CLEC18B-203ENST00000564842 MROH2BQ7Z745 1585 aa26.06■■□□□ 1.76
CLEC18B-203ENST00000564842 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
CLEC18B-203ENST00000564842 NESP48681 1621 aa25.96■■□□□ 1.75
CLEC18B-203ENST00000564842 CUX2O14529 1486 aa25.96■■□□□ 1.75
CLEC18B-203ENST00000564842 DNAJC5Q9H3Z4 198 aa25.85■■□□□ 1.73
CLEC18B-203ENST00000564842 LAMC3Q9Y6N6 1575 aa25.79■■□□□ 1.72
CLEC18B-203ENST00000564842 WIZO95785 1651 aa25.74■■□□□ 1.71
CLEC18B-203ENST00000564842 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
CLEC18B-203ENST00000564842 CADPSQ9ULU8 1353 aa25.67■■□□□ 1.7
CLEC18B-203ENST00000564842 THOC2Q8NI27 1593 aaKnown RBP25.61■■□□□ 1.69
CLEC18B-203ENST00000564842 RSF1Q96T23 1441 aaPredicted RBP25.6■■□□□ 1.69
CLEC18B-203ENST00000564842 KIF21AQ7Z4S6 1674 aa25.59■■□□□ 1.69
CLEC18B-203ENST00000564842 MRC2Q9UBG0 1479 aa25.44■■□□□ 1.66
CLEC18B-203ENST00000564842 TOP2AP11388 1531 aaKnown RBP25.43■■□□□ 1.66
CLEC18B-203ENST00000564842 CEP164Q9UPV0 1460 aa25.38■■□□□ 1.65
CLEC18B-203ENST00000564842 FANCD2Q9BXW9 1451 aa25.36■■□□□ 1.65
CLEC18B-203ENST00000564842 CFTRP13569 1480 aa25.35■■□□□ 1.65
CLEC18B-203ENST00000564842 WDR62O43379 1518 aa25.32■■□□□ 1.64
CLEC18B-203ENST00000564842 CCDC88BA6NC98 1476 aa25.18■■□□□ 1.62
CLEC18B-203ENST00000564842 URB2Q14146 1524 aaKnown RBP25.11■■□□□ 1.61
CLEC18B-203ENST00000564842 PRDM2Q13029 1718 aa25.04■■□□□ 1.6
CLEC18B-203ENST00000564842 OSCARQ8IYS5 282 aa24.91■■□□□ 1.58
CLEC18B-203ENST00000564842 IFT140Q96RY7 1462 aa24.87■■□□□ 1.57
CLEC18B-203ENST00000564842 TOPBP1Q92547 1522 aa24.86■■□□□ 1.57
CLEC18B-203ENST00000564842 ABCC8Q09428 1581 aa24.86■■□□□ 1.57
CLEC18B-203ENST00000564842 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
CLEC18B-203ENST00000564842 ZNF608Q9ULD9 1512 aaPredicted RBP24.79■■□□□ 1.56
CLEC18B-203ENST00000564842 DNMBPQ6XZF7 1577 aa24.78■■□□□ 1.56
CLEC18B-203ENST00000564842 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
CLEC18B-203ENST00000564842 POLA1P09884 1462 aaPredicted RBP24.63■■□□□ 1.53
CLEC18B-203ENST00000564842 AQRO60306 1485 aaKnown RBP eCLIP24.62■■□□□ 1.53
CLEC18B-203ENST00000564842 EIF4G3O43432 1585 aaKnown RBP24.62■■□□□ 1.53
CLEC18B-203ENST00000564842 TARBP1Q13395 1621 aaKnown RBP24.59■■□□□ 1.53
CLEC18B-203ENST00000564842 SOGA1O94964 1423 aa24.58■■□□□ 1.53
CLEC18B-203ENST00000564842 FBLN2P98095 1184 aa24.56■■□□□ 1.52
CLEC18B-203ENST00000564842 RAD54L2Q9Y4B4 1467 aa24.56■■□□□ 1.52
CLEC18B-203ENST00000564842 TDRD9Q8NDG6 1382 aaKnown RBP24.52■■□□□ 1.52
CLEC18B-203ENST00000564842 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
CLEC18B-203ENST00000564842 CUX1P39880 1505 aa24.47■■□□□ 1.51
CLEC18B-203ENST00000564842 RIMBP3CA6NJZ7 1639 aa24.44■■□□□ 1.5
CLEC18B-203ENST00000564842 RIMBP3BA6NNM3 1639 aa24.44■■□□□ 1.5
CLEC18B-203ENST00000564842 RIMBP3Q9UFD9 1639 aa24.44■■□□□ 1.5
CLEC18B-203ENST00000564842 CHD1O14646 1710 aa24.41■■□□□ 1.5
CLEC18B-203ENST00000564842 ARHGEF11O15085 1522 aa24.39■■□□□ 1.49
CLEC18B-203ENST00000564842 CHMP7Q8WUX9 453 aaPredicted RBP24.37■■□□□ 1.49
CLEC18B-203ENST00000564842 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
CLEC18B-203ENST00000564842 SNAPC4Q5SXM2 1469 aa24.35■■□□□ 1.49
CLEC18B-203ENST00000564842 CYB5RLQ6IPT4 315 aa24.33■■□□□ 1.49
CLEC18B-203ENST00000564842 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
CLEC18B-203ENST00000564842 MAGI1Q96QZ7 1491 aaPredicted RBP24.29■■□□□ 1.48
CLEC18B-203ENST00000564842 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
CLEC18B-203ENST00000564842 ABCA10Q8WWZ4 1543 aa24.21■■□□□ 1.47
CLEC18B-203ENST00000564842 SYNJ2O15056 1496 aa24.21■■□□□ 1.47
CLEC18B-203ENST00000564842 WRNQ14191 1432 aaPredicted RBP eCLIP24.21■■□□□ 1.47
CLEC18B-203ENST00000564842 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
CLEC18B-203ENST00000564842 PBRM1Q86U86 1689 aa24.16■■□□□ 1.46
CLEC18B-203ENST00000564842 ARAP1Q96P48 1450 aa24.15■■□□□ 1.46
CLEC18B-203ENST00000564842 CLASP1Q7Z460 1538 aa24.12■■□□□ 1.45
CLEC18B-203ENST00000564842 ABCA5Q8WWZ7 1642 aa24.12■■□□□ 1.45
CLEC18B-203ENST00000564842 TOP2BQ02880 1626 aa24.11■■□□□ 1.45
CLEC18B-203ENST00000564842 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
CLEC18B-203ENST00000564842 TRHP20396 242 aaPredicted RBP24.07■■□□□ 1.44
CLEC18B-203ENST00000564842 GRIN2AQ12879 1464 aa23.98■■□□□ 1.43
CLEC18B-203ENST00000564842 FHAD1B1AJZ9 1412 aa23.96■■□□□ 1.43
CLEC18B-203ENST00000564842 ADAMTS12P58397 1594 aa23.95■■□□□ 1.42
CLEC18B-203ENST00000564842 ERICH3Q5RHP9 1530 aa23.92■■□□□ 1.42
CLEC18B-203ENST00000564842 NUP160Q12769 1436 aa23.88■■□□□ 1.41
CLEC18B-203ENST00000564842 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
CLEC18B-203ENST00000564842 ERCC6L2Q5T890 1561 aa23.78■■□□□ 1.4
CLEC18B-203ENST00000564842 JPH4Q96JJ6 628 aa23.74■■□□□ 1.39
CLEC18B-203ENST00000564842 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
CLEC18B-203ENST00000564842 PRG4Q92954 1404 aaPredicted RBP23.71■■□□□ 1.39
CLEC18B-203ENST00000564842 SHROOM2Q13796 1616 aa23.7■■□□□ 1.39
CLEC18B-203ENST00000564842 IGF1RP08069 1367 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms