RNA–Protein interactions for RNA: ENST00000564839.1

EIF3C-205, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 2

Gene EIF3C, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-205ENST00000564839 NISCHQ9Y2I1 1504 aa27.24■■□□□ 1.95
EIF3C-205ENST00000564839 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.5
EIF3C-205ENST00000564839 ABCC9O60706 1549 aa24.15■■□□□ 1.46
EIF3C-205ENST00000564839 RB1CC1Q8TDY2 1594 aa23.1■■□□□ 1.29
EIF3C-205ENST00000564839 NACADO15069 1562 aa23■■□□□ 1.27
EIF3C-205ENST00000564839 MYO15BQ96JP2 1530 aa22.82■■□□□ 1.24
EIF3C-205ENST00000564839 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
EIF3C-205ENST00000564839 UNC13AQ9UPW8 1703 aa22.64■■□□□ 1.21
EIF3C-205ENST00000564839 ZCCHC6Q5VYS8 1495 aaKnown RBP22.62■■□□□ 1.21
EIF3C-205ENST00000564839 DNAJC5BQ9UF47 199 aa22.61■■□□□ 1.21
EIF3C-205ENST00000564839 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
EIF3C-205ENST00000564839 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
EIF3C-205ENST00000564839 PABPN1Q86U42 306 aaKnown RBP eCLIP22.48■■□□□ 1.19
EIF3C-205ENST00000564839 SHROOM4Q9ULL8 1493 aa22.21■■□□□ 1.15
EIF3C-205ENST00000564839 SCRIBQ14160 1630 aa22.15■■□□□ 1.14
EIF3C-205ENST00000564839 EIF4G1Q04637 1599 aaKnown RBP21.88■■□□□ 1.09
EIF3C-205ENST00000564839 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
EIF3C-205ENST00000564839 CECR2Q9BXF3 1484 aa21.76■■□□□ 1.07
EIF3C-205ENST00000564839 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
EIF3C-205ENST00000564839 SMARCA4P51532 1647 aa21.21■□□□□ 0.99
EIF3C-205ENST00000564839 ATAD2BQ9ULI0 1458 aa21.19■□□□□ 0.98
EIF3C-205ENST00000564839 SMARCA2P51531 1590 aa21.11■□□□□ 0.97
EIF3C-205ENST00000564839 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
EIF3C-205ENST00000564839 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
EIF3C-205ENST00000564839 PEG3Q9GZU2 1588 aa21.07■□□□□ 0.96
EIF3C-205ENST00000564839 MROH2BQ7Z745 1585 aa20.98■□□□□ 0.95
EIF3C-205ENST00000564839 BAZ1BQ9UIG0 1483 aaKnown RBP20.94■□□□□ 0.94
EIF3C-205ENST00000564839 NESP48681 1621 aa20.83■□□□□ 0.93
EIF3C-205ENST00000564839 CUX2O14529 1486 aa20.81■□□□□ 0.92
EIF3C-205ENST00000564839 ERCC6Q03468 1493 aa20.78■□□□□ 0.92
EIF3C-205ENST00000564839 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
EIF3C-205ENST00000564839 WIZO95785 1651 aa20.72■□□□□ 0.91
EIF3C-205ENST00000564839 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
EIF3C-205ENST00000564839 DNAJC5Q9H3Z4 198 aa20.62■□□□□ 0.89
EIF3C-205ENST00000564839 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
EIF3C-205ENST00000564839 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.88
EIF3C-205ENST00000564839 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.88
EIF3C-205ENST00000564839 PDS5BQ9NTI5 1447 aa20.55■□□□□ 0.88
EIF3C-205ENST00000564839 TOP2AP11388 1531 aaKnown RBP20.48■□□□□ 0.87
EIF3C-205ENST00000564839 CFTRP13569 1480 aa20.41■□□□□ 0.86
EIF3C-205ENST00000564839 MRC2Q9UBG0 1479 aa20.39■□□□□ 0.85
EIF3C-205ENST00000564839 WDR62O43379 1518 aa20.37■□□□□ 0.85
EIF3C-205ENST00000564839 FANCD2Q9BXW9 1451 aa20.32■□□□□ 0.84
EIF3C-205ENST00000564839 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
EIF3C-205ENST00000564839 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
EIF3C-205ENST00000564839 PRDM2Q13029 1718 aa20.21■□□□□ 0.83
EIF3C-205ENST00000564839 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
EIF3C-205ENST00000564839 TOPBP1Q92547 1522 aa19.97■□□□□ 0.79
EIF3C-205ENST00000564839 IFT140Q96RY7 1462 aa19.93■□□□□ 0.78
EIF3C-205ENST00000564839 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
EIF3C-205ENST00000564839 DNMBPQ6XZF7 1577 aa19.92■□□□□ 0.78
EIF3C-205ENST00000564839 ZNF608Q9ULD9 1512 aaPredicted RBP19.9■□□□□ 0.78
EIF3C-205ENST00000564839 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
EIF3C-205ENST00000564839 OSCARQ8IYS5 282 aa19.81■□□□□ 0.76
EIF3C-205ENST00000564839 EIF4G3O43432 1585 aaKnown RBP19.79■□□□□ 0.76
EIF3C-205ENST00000564839 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
EIF3C-205ENST00000564839 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.75
EIF3C-205ENST00000564839 CUX1P39880 1505 aa19.7■□□□□ 0.74
EIF3C-205ENST00000564839 RAD54L2Q9Y4B4 1467 aa19.69■□□□□ 0.74
EIF3C-205ENST00000564839 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
EIF3C-205ENST00000564839 SOGA1O94964 1423 aa19.66■□□□□ 0.74
EIF3C-205ENST00000564839 WDR97A6NE52 1622 aa19.64■□□□□ 0.73
EIF3C-205ENST00000564839 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
EIF3C-205ENST00000564839 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
EIF3C-205ENST00000564839 CHD1O14646 1710 aa19.61■□□□□ 0.73
EIF3C-205ENST00000564839 RIMBP3CA6NJZ7 1639 aa19.6■□□□□ 0.73
EIF3C-205ENST00000564839 RIMBP3BA6NNM3 1639 aa19.6■□□□□ 0.73
EIF3C-205ENST00000564839 RIMBP3Q9UFD9 1639 aa19.6■□□□□ 0.73
EIF3C-205ENST00000564839 TDRD9Q8NDG6 1382 aaKnown RBP19.59■□□□□ 0.73
EIF3C-205ENST00000564839 ARHGEF11O15085 1522 aa19.55■□□□□ 0.72
EIF3C-205ENST00000564839 SNAPC4Q5SXM2 1469 aa19.51■□□□□ 0.71
EIF3C-205ENST00000564839 GRIN2BQ13224 1484 aa19.48■□□□□ 0.71
EIF3C-205ENST00000564839 MAGI1Q96QZ7 1491 aaPredicted RBP19.48■□□□□ 0.71
EIF3C-205ENST00000564839 ABCA10Q8WWZ4 1543 aa19.48■□□□□ 0.71
EIF3C-205ENST00000564839 ABCA5Q8WWZ7 1642 aa19.46■□□□□ 0.71
EIF3C-205ENST00000564839 BIVM-ERCC5R4GMW8 1640 aa19.45■□□□□ 0.7
EIF3C-205ENST00000564839 CLASP1Q7Z460 1538 aa19.45■□□□□ 0.7
EIF3C-205ENST00000564839 TOP2BQ02880 1626 aa19.43■□□□□ 0.7
EIF3C-205ENST00000564839 PBRM1Q86U86 1689 aa19.43■□□□□ 0.7
EIF3C-205ENST00000564839 GAPVD1Q14C86 1478 aa19.43■□□□□ 0.7
EIF3C-205ENST00000564839 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
EIF3C-205ENST00000564839 FBLN2P98095 1184 aa19.41■□□□□ 0.7
EIF3C-205ENST00000564839 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
EIF3C-205ENST00000564839 WRNQ14191 1432 aaPredicted RBP eCLIP19.38■□□□□ 0.69
EIF3C-205ENST00000564839 ARAP1Q96P48 1450 aa19.38■□□□□ 0.69
EIF3C-205ENST00000564839 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
EIF3C-205ENST00000564839 CYB5RLQ6IPT4 315 aa19.3■□□□□ 0.68
EIF3C-205ENST00000564839 ADAMTS12P58397 1594 aa19.27■□□□□ 0.68
EIF3C-205ENST00000564839 GRIN2AQ12879 1464 aa19.25■□□□□ 0.67
EIF3C-205ENST00000564839 ERICH3Q5RHP9 1530 aa19.24■□□□□ 0.67
EIF3C-205ENST00000564839 NUP160Q12769 1436 aa19.22■□□□□ 0.67
EIF3C-205ENST00000564839 FHAD1B1AJZ9 1412 aa19.2■□□□□ 0.66
EIF3C-205ENST00000564839 CEP170Q5SW79 1584 aa19.19■□□□□ 0.66
EIF3C-205ENST00000564839 SHROOM2Q13796 1616 aa19.14■□□□□ 0.66
EIF3C-205ENST00000564839 ERCC6L2Q5T890 1561 aa19.13■□□□□ 0.65
EIF3C-205ENST00000564839 IGF1RP08069 1367 aa19.02■□□□□ 0.64
EIF3C-205ENST00000564839 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
EIF3C-205ENST00000564839 KIF27Q86VH2 1401 aa18.99■□□□□ 0.63
EIF3C-205ENST00000564839 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
EIF3C-205ENST00000564839 CUL7Q14999 1698 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms