RNA–Protein interactions for RNA: ENST00000564773.1

GRAMD2A-206, Transcript of GRAM domain containing 2A, humanhuman

TSL 4

Gene GRAMD2A, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2A-206ENST00000564773 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
GRAMD2A-206ENST00000564773 CCDC180Q9P1Z9 1646 aa26.14■■□□□ 1.77
GRAMD2A-206ENST00000564773 ABCC9O60706 1549 aa25.5■■□□□ 1.67
GRAMD2A-206ENST00000564773 RB1CC1Q8TDY2 1594 aa24.52■■□□□ 1.52
GRAMD2A-206ENST00000564773 NACADO15069 1562 aa24.5■■□□□ 1.51
GRAMD2A-206ENST00000564773 ZCCHC6Q5VYS8 1495 aaKnown RBP24.48■■□□□ 1.51
GRAMD2A-206ENST00000564773 MYO15BQ96JP2 1530 aa24.38■■□□□ 1.49
GRAMD2A-206ENST00000564773 DCAF1Q9Y4B6 1507 aa24.29■■□□□ 1.48
GRAMD2A-206ENST00000564773 DCAF8L2P0C7V8 631 aa24.28■■□□□ 1.48
GRAMD2A-206ENST00000564773 UNC13AQ9UPW8 1703 aa24.12■■□□□ 1.45
GRAMD2A-206ENST00000564773 DNAJC5BQ9UF47 199 aa24■■□□□ 1.43
GRAMD2A-206ENST00000564773 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
GRAMD2A-206ENST00000564773 SCRIBQ14160 1630 aa23.82■■□□□ 1.4
GRAMD2A-206ENST00000564773 PABPN1Q86U42 306 aaKnown RBP eCLIP23.77■■□□□ 1.4
GRAMD2A-206ENST00000564773 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
GRAMD2A-206ENST00000564773 EIF4G1Q04637 1599 aaKnown RBP23.2■■□□□ 1.3
GRAMD2A-206ENST00000564773 CC2D2AQ9P2K1 1620 aa23.11■■□□□ 1.29
GRAMD2A-206ENST00000564773 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
GRAMD2A-206ENST00000564773 SMARCA4P51532 1647 aa22.8■■□□□ 1.24
GRAMD2A-206ENST00000564773 BAZ1AQ9NRL2 1556 aaPredicted RBP22.71■■□□□ 1.23
GRAMD2A-206ENST00000564773 MROH2BQ7Z745 1585 aa22.64■■□□□ 1.22
GRAMD2A-206ENST00000564773 ATAD2BQ9ULI0 1458 aa22.64■■□□□ 1.21
GRAMD2A-206ENST00000564773 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
GRAMD2A-206ENST00000564773 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
GRAMD2A-206ENST00000564773 SMARCA2P51531 1590 aa22.58■■□□□ 1.2
GRAMD2A-206ENST00000564773 HMGXB3Q12766 1538 aa22.53■■□□□ 1.2
GRAMD2A-206ENST00000564773 WIZO95785 1651 aa22.41■■□□□ 1.18
GRAMD2A-206ENST00000564773 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
GRAMD2A-206ENST00000564773 DNAJC5Q9H3Z4 198 aa22.4■■□□□ 1.18
GRAMD2A-206ENST00000564773 RSF1Q96T23 1441 aaPredicted RBP22.34■■□□□ 1.17
GRAMD2A-206ENST00000564773 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
GRAMD2A-206ENST00000564773 NESP48681 1621 aa22.12■■□□□ 1.13
GRAMD2A-206ENST00000564773 CUX2O14529 1486 aa22.09■■□□□ 1.13
GRAMD2A-206ENST00000564773 LAMC3Q9Y6N6 1575 aa22.02■■□□□ 1.12
GRAMD2A-206ENST00000564773 ERCC6Q03468 1493 aa21.93■■□□□ 1.1
GRAMD2A-206ENST00000564773 CADPSQ9ULU8 1353 aa21.9■■□□□ 1.1
GRAMD2A-206ENST00000564773 KIF21AQ7Z4S6 1674 aa21.9■■□□□ 1.1
GRAMD2A-206ENST00000564773 CCDC88BA6NC98 1476 aa21.86■■□□□ 1.09
GRAMD2A-206ENST00000564773 THOC2Q8NI27 1593 aaKnown RBP21.84■■□□□ 1.09
GRAMD2A-206ENST00000564773 CFTRP13569 1480 aa21.83■■□□□ 1.08
GRAMD2A-206ENST00000564773 PDS5BQ9NTI5 1447 aa21.78■■□□□ 1.08
GRAMD2A-206ENST00000564773 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
GRAMD2A-206ENST00000564773 FANCD2Q9BXW9 1451 aa21.68■■□□□ 1.06
GRAMD2A-206ENST00000564773 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.06
GRAMD2A-206ENST00000564773 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.05
GRAMD2A-206ENST00000564773 WDR62O43379 1518 aa21.62■■□□□ 1.05
GRAMD2A-206ENST00000564773 SUPT5HO00267 1087 aaKnown RBP21.62■■□□□ 1.05
GRAMD2A-206ENST00000564773 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
GRAMD2A-206ENST00000564773 TOPBP1Q92547 1522 aa21.37■■□□□ 1.01
GRAMD2A-206ENST00000564773 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
GRAMD2A-206ENST00000564773 ABCC8Q09428 1581 aa21.27■■□□□ 1
GRAMD2A-206ENST00000564773 CUX1P39880 1505 aa21.24■□□□□ 0.99
GRAMD2A-206ENST00000564773 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
GRAMD2A-206ENST00000564773 TARBP1Q13395 1621 aaKnown RBP21.2■□□□□ 0.98
GRAMD2A-206ENST00000564773 POLA1P09884 1462 aaPredicted RBP21.2■□□□□ 0.98
GRAMD2A-206ENST00000564773 IFT140Q96RY7 1462 aa21.19■□□□□ 0.98
GRAMD2A-206ENST00000564773 ZNF608Q9ULD9 1512 aaPredicted RBP21.16■□□□□ 0.98
GRAMD2A-206ENST00000564773 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
GRAMD2A-206ENST00000564773 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
GRAMD2A-206ENST00000564773 RAD54L2Q9Y4B4 1467 aa21.09■□□□□ 0.97
GRAMD2A-206ENST00000564773 BIVM-ERCC5R4GMW8 1640 aa21.08■□□□□ 0.97
GRAMD2A-206ENST00000564773 SYNJ1O43426 1573 aa21.08■□□□□ 0.97
GRAMD2A-206ENST00000564773 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
GRAMD2A-206ENST00000564773 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
GRAMD2A-206ENST00000564773 SOGA1O94964 1423 aa21.03■□□□□ 0.96
GRAMD2A-206ENST00000564773 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
GRAMD2A-206ENST00000564773 AQRO60306 1485 aaKnown RBP eCLIP20.99■□□□□ 0.95
GRAMD2A-206ENST00000564773 ABCA10Q8WWZ4 1543 aa20.93■□□□□ 0.94
GRAMD2A-206ENST00000564773 TDRD9Q8NDG6 1382 aaKnown RBP20.92■□□□□ 0.94
GRAMD2A-206ENST00000564773 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
GRAMD2A-206ENST00000564773 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
GRAMD2A-206ENST00000564773 CHD1O14646 1710 aa20.84■□□□□ 0.93
GRAMD2A-206ENST00000564773 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
GRAMD2A-206ENST00000564773 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
GRAMD2A-206ENST00000564773 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
GRAMD2A-206ENST00000564773 RIMBP3CA6NJZ7 1639 aa20.8■□□□□ 0.92
GRAMD2A-206ENST00000564773 RIMBP3BA6NNM3 1639 aa20.8■□□□□ 0.92
GRAMD2A-206ENST00000564773 RIMBP3Q9UFD9 1639 aa20.8■□□□□ 0.92
GRAMD2A-206ENST00000564773 OSCARQ8IYS5 282 aa20.8■□□□□ 0.92
GRAMD2A-206ENST00000564773 MAGI1Q96QZ7 1491 aaPredicted RBP20.76■□□□□ 0.91
GRAMD2A-206ENST00000564773 ADAMTS12P58397 1594 aa20.69■□□□□ 0.9
GRAMD2A-206ENST00000564773 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
GRAMD2A-206ENST00000564773 ARHGEF11O15085 1522 aa20.66■□□□□ 0.9
GRAMD2A-206ENST00000564773 ERICH3Q5RHP9 1530 aa20.66■□□□□ 0.9
GRAMD2A-206ENST00000564773 CLASP1Q7Z460 1538 aa20.63■□□□□ 0.89
GRAMD2A-206ENST00000564773 FBLN2P98095 1184 aa20.59■□□□□ 0.89
GRAMD2A-206ENST00000564773 GRIN2AQ12879 1464 aa20.57■□□□□ 0.88
GRAMD2A-206ENST00000564773 FHAD1B1AJZ9 1412 aa20.56■□□□□ 0.88
GRAMD2A-206ENST00000564773 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
GRAMD2A-206ENST00000564773 KIF27Q86VH2 1401 aa20.53■□□□□ 0.88
GRAMD2A-206ENST00000564773 CEP170Q5SW79 1584 aa20.53■□□□□ 0.88
GRAMD2A-206ENST00000564773 IGF1RP08069 1367 aa20.5■□□□□ 0.87
GRAMD2A-206ENST00000564773 NUP160Q12769 1436 aa20.5■□□□□ 0.87
GRAMD2A-206ENST00000564773 CUL7Q14999 1698 aa20.49■□□□□ 0.87
GRAMD2A-206ENST00000564773 RUSC2Q8N2Y8 1516 aa20.48■□□□□ 0.87
GRAMD2A-206ENST00000564773 ARAP1Q96P48 1450 aa20.42■□□□□ 0.86
GRAMD2A-206ENST00000564773 SHROOM2Q13796 1616 aa20.4■□□□□ 0.86
GRAMD2A-206ENST00000564773 ERCC6L2Q5T890 1561 aa20.36■□□□□ 0.85
GRAMD2A-206ENST00000564773 CARMIL1Q5VZK9 1371 aa20.34■□□□□ 0.85
GRAMD2A-206ENST00000564773 CYB5RLQ6IPT4 315 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms