RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 NISCHQ9Y2I1 1504 aa40.34■■■■■ 4.05
CDH11-210ENST00000564770 CCDC180Q9P1Z9 1646 aa36.33■■■■□ 3.41
CDH11-210ENST00000564770 ABCC9O60706 1549 aa36.26■■■■□ 3.4
CDH11-210ENST00000564770 RB1CC1Q8TDY2 1594 aa34.51■■■■□ 3.12
CDH11-210ENST00000564770 NACADO15069 1562 aa34.24■■■■□ 3.07
CDH11-210ENST00000564770 DNAJC5BQ9UF47 199 aa33.99■■■■□ 3.03
CDH11-210ENST00000564770 UNC13AQ9UPW8 1703 aa33.93■■■■□ 3.02
CDH11-210ENST00000564770 DCAF8L2P0C7V8 631 aa33.84■■■■□ 3.01
CDH11-210ENST00000564770 MYO15BQ96JP2 1530 aa33.75■■■□□ 2.99
CDH11-210ENST00000564770 PABPN1Q86U42 306 aaKnown RBP eCLIP33.65■■■□□ 2.98
CDH11-210ENST00000564770 BICRAQ9NZM4 1560 aa33.6■■■□□ 2.97
CDH11-210ENST00000564770 ZCCHC6Q5VYS8 1495 aaKnown RBP33.49■■■□□ 2.95
CDH11-210ENST00000564770 DCAF1Q9Y4B6 1507 aa33.33■■■□□ 2.93
CDH11-210ENST00000564770 SCRIBQ14160 1630 aa33.08■■■□□ 2.89
CDH11-210ENST00000564770 SHROOM4Q9ULL8 1493 aa33.05■■■□□ 2.88
CDH11-210ENST00000564770 CC2D2AQ9P2K1 1620 aa32.82■■■□□ 2.84
CDH11-210ENST00000564770 EIF4G1Q04637 1599 aaKnown RBP32.74■■■□□ 2.83
CDH11-210ENST00000564770 CECR2Q9BXF3 1484 aa32.65■■■□□ 2.82
CDH11-210ENST00000564770 NCAPD3P42695 1498 aa31.58■■■□□ 2.65
CDH11-210ENST00000564770 SMARCA4P51532 1647 aa31.55■■■□□ 2.64
CDH11-210ENST00000564770 ATAD2BQ9ULI0 1458 aa31.51■■■□□ 2.63
CDH11-210ENST00000564770 HMGXB3Q12766 1538 aa31.43■■■□□ 2.62
CDH11-210ENST00000564770 SMARCA2P51531 1590 aa31.42■■■□□ 2.62
CDH11-210ENST00000564770 BAZ1AQ9NRL2 1556 aaPredicted RBP31.32■■■□□ 2.6
CDH11-210ENST00000564770 ERCC6Q03468 1493 aa31.26■■■□□ 2.59
CDH11-210ENST00000564770 CUX2O14529 1486 aa31.25■■■□□ 2.59
CDH11-210ENST00000564770 PEG3Q9GZU2 1588 aa31.23■■■□□ 2.59
CDH11-210ENST00000564770 BAZ1BQ9UIG0 1483 aaKnown RBP31.2■■■□□ 2.58
CDH11-210ENST00000564770 NESP48681 1621 aa31.18■■■□□ 2.58
CDH11-210ENST00000564770 DNAJC5Q9H3Z4 198 aa31.17■■■□□ 2.58
CDH11-210ENST00000564770 MROH2BQ7Z745 1585 aa31.12■■■□□ 2.57
CDH11-210ENST00000564770 THOC2Q8NI27 1593 aaKnown RBP30.96■■■□□ 2.55
CDH11-210ENST00000564770 LAMC3Q9Y6N6 1575 aa30.94■■■□□ 2.54
CDH11-210ENST00000564770 KIF21AQ7Z4S6 1674 aa30.88■■■□□ 2.53
CDH11-210ENST00000564770 WIZO95785 1651 aa30.79■■■□□ 2.52
CDH11-210ENST00000564770 PDS5BQ9NTI5 1447 aa30.64■■■□□ 2.5
CDH11-210ENST00000564770 CADPSQ9ULU8 1353 aa30.58■■■□□ 2.49
CDH11-210ENST00000564770 MRC2Q9UBG0 1479 aa30.48■■■□□ 2.47
CDH11-210ENST00000564770 WDR62O43379 1518 aa30.46■■■□□ 2.47
CDH11-210ENST00000564770 RSF1Q96T23 1441 aaPredicted RBP30.39■■■□□ 2.46
CDH11-210ENST00000564770 TOP2AP11388 1531 aaKnown RBP30.36■■■□□ 2.45
CDH11-210ENST00000564770 CEP164Q9UPV0 1460 aa30.35■■■□□ 2.45
CDH11-210ENST00000564770 FANCD2Q9BXW9 1451 aa30.3■■■□□ 2.44
CDH11-210ENST00000564770 CFTRP13569 1480 aa30.28■■■□□ 2.44
CDH11-210ENST00000564770 PRDM2Q13029 1718 aa30.17■■■□□ 2.42
CDH11-210ENST00000564770 URB2Q14146 1524 aaKnown RBP30.11■■■□□ 2.41
CDH11-210ENST00000564770 CCDC88BA6NC98 1476 aa29.95■■■□□ 2.39
CDH11-210ENST00000564770 TRIM41Q8WV44 630 aa29.8■■■□□ 2.36
CDH11-210ENST00000564770 TOPBP1Q92547 1522 aa29.75■■■□□ 2.35
CDH11-210ENST00000564770 ZNF608Q9ULD9 1512 aaPredicted RBP29.73■■■□□ 2.35
CDH11-210ENST00000564770 IFT140Q96RY7 1462 aa29.7■■■□□ 2.35
CDH11-210ENST00000564770 DNMBPQ6XZF7 1577 aa29.66■■■□□ 2.34
CDH11-210ENST00000564770 OSCARQ8IYS5 282 aa29.66■■■□□ 2.34
CDH11-210ENST00000564770 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.34
CDH11-210ENST00000564770 ABCC8Q09428 1581 aa29.58■■■□□ 2.33
CDH11-210ENST00000564770 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
CDH11-210ENST00000564770 RIMBP3CA6NJZ7 1639 aa29.53■■■□□ 2.32
CDH11-210ENST00000564770 RIMBP3BA6NNM3 1639 aa29.53■■■□□ 2.32
CDH11-210ENST00000564770 RIMBP3Q9UFD9 1639 aa29.53■■■□□ 2.32
CDH11-210ENST00000564770 CHD1O14646 1710 aa29.46■■■□□ 2.31
CDH11-210ENST00000564770 POLA1P09884 1462 aaPredicted RBP29.45■■■□□ 2.31
CDH11-210ENST00000564770 AQRO60306 1485 aaKnown RBP eCLIP29.39■■■□□ 2.3
CDH11-210ENST00000564770 ARHGEF11O15085 1522 aa29.39■■■□□ 2.3
CDH11-210ENST00000564770 RAD54L2Q9Y4B4 1467 aa29.31■■■□□ 2.28
CDH11-210ENST00000564770 FGD5Q6ZNL6 1462 aa29.26■■■□□ 2.27
CDH11-210ENST00000564770 CUX1P39880 1505 aa29.25■■■□□ 2.27
CDH11-210ENST00000564770 WDR97A6NE52 1622 aa29.2■■■□□ 2.27
CDH11-210ENST00000564770 SOGA1O94964 1423 aa29.2■■■□□ 2.26
CDH11-210ENST00000564770 TDRD9Q8NDG6 1382 aaKnown RBP29.16■■■□□ 2.26
CDH11-210ENST00000564770 SNAPC4Q5SXM2 1469 aa29.15■■■□□ 2.26
CDH11-210ENST00000564770 ARAP1Q96P48 1450 aa29.11■■■□□ 2.25
CDH11-210ENST00000564770 FBLN2P98095 1184 aa29.08■■■□□ 2.25
CDH11-210ENST00000564770 PBRM1Q86U86 1689 aa29.06■■■□□ 2.24
CDH11-210ENST00000564770 CLASP1Q7Z460 1538 aa29.06■■■□□ 2.24
CDH11-210ENST00000564770 MAGI1Q96QZ7 1491 aaPredicted RBP29.03■■■□□ 2.24
CDH11-210ENST00000564770 GRIN2BQ13224 1484 aa29■■■□□ 2.23
CDH11-210ENST00000564770 CYB5RLQ6IPT4 315 aa28.99■■■□□ 2.23
CDH11-210ENST00000564770 SYNJ1O43426 1573 aa28.97■■■□□ 2.23
CDH11-210ENST00000564770 ABCA5Q8WWZ7 1642 aa28.96■■■□□ 2.23
CDH11-210ENST00000564770 SYNJ2O15056 1496 aa28.93■■■□□ 2.22
CDH11-210ENST00000564770 GAPVD1Q14C86 1478 aa28.91■■■□□ 2.22
CDH11-210ENST00000564770 ABCA10Q8WWZ4 1543 aa28.89■■■□□ 2.22
CDH11-210ENST00000564770 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
CDH11-210ENST00000564770 CHMP7Q8WUX9 453 aaPredicted RBP28.85■■■□□ 2.21
CDH11-210ENST00000564770 BIVM-ERCC5R4GMW8 1640 aa28.82■■■□□ 2.2
CDH11-210ENST00000564770 TOP2BQ02880 1626 aa28.77■■■□□ 2.2
CDH11-210ENST00000564770 ADAMTS12P58397 1594 aa28.75■■■□□ 2.19
CDH11-210ENST00000564770 WRNQ14191 1432 aaPredicted RBP eCLIP28.69■■■□□ 2.18
CDH11-210ENST00000564770 GRIN2AQ12879 1464 aa28.68■■■□□ 2.18
CDH11-210ENST00000564770 TRHP20396 242 aaPredicted RBP28.65■■■□□ 2.18
CDH11-210ENST00000564770 CEP170Q5SW79 1584 aa28.64■■■□□ 2.18
CDH11-210ENST00000564770 ERCC6L2Q5T890 1561 aa28.62■■■□□ 2.17
CDH11-210ENST00000564770 NUP160Q12769 1436 aa28.58■■■□□ 2.17
CDH11-210ENST00000564770 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
CDH11-210ENST00000564770 ERICH3Q5RHP9 1530 aa28.54■■■□□ 2.16
CDH11-210ENST00000564770 FHAD1B1AJZ9 1412 aa28.51■■■□□ 2.15
CDH11-210ENST00000564770 RUSC2Q8N2Y8 1516 aa28.36■■■□□ 2.13
CDH11-210ENST00000564770 PRG4Q92954 1404 aaPredicted RBP28.24■■■□□ 2.11
CDH11-210ENST00000564770 KIF13AQ9H1H9 1805 aa28.23■■■□□ 2.11
CDH11-210ENST00000564770 CUL7Q14999 1698 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms