RNA–Protein interactions for RNA: ENST00000564680.5

TREML3P-202, Transcript of triggering receptor expressed on myeloid cells like 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene TREML3P, Length 978 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREML3P-202ENST00000564680 NISCHQ9Y2I1 1504 aa28.19■■■□□ 2.1
TREML3P-202ENST00000564680 CCDC180Q9P1Z9 1646 aa25.17■■□□□ 1.62
TREML3P-202ENST00000564680 ABCC9O60706 1549 aa24.22■■□□□ 1.47
TREML3P-202ENST00000564680 ZCCHC6Q5VYS8 1495 aaKnown RBP23.58■■□□□ 1.37
TREML3P-202ENST00000564680 RB1CC1Q8TDY2 1594 aa23.5■■□□□ 1.35
TREML3P-202ENST00000564680 NACADO15069 1562 aa23.48■■□□□ 1.35
TREML3P-202ENST00000564680 MYO15BQ96JP2 1530 aa23.37■■□□□ 1.33
TREML3P-202ENST00000564680 DCAF1Q9Y4B6 1507 aa23.37■■□□□ 1.33
TREML3P-202ENST00000564680 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
TREML3P-202ENST00000564680 UNC13AQ9UPW8 1703 aa23.1■■□□□ 1.29
TREML3P-202ENST00000564680 SCRIBQ14160 1630 aa22.93■■□□□ 1.26
TREML3P-202ENST00000564680 BICRAQ9NZM4 1560 aa22.7■■□□□ 1.22
TREML3P-202ENST00000564680 SHROOM4Q9ULL8 1493 aa22.55■■□□□ 1.2
TREML3P-202ENST00000564680 PABPN1Q86U42 306 aaKnown RBP eCLIP22.54■■□□□ 1.2
TREML3P-202ENST00000564680 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
TREML3P-202ENST00000564680 CC2D2AQ9P2K1 1620 aa21.99■■□□□ 1.11
TREML3P-202ENST00000564680 SMARCA4P51532 1647 aa21.93■■□□□ 1.1
TREML3P-202ENST00000564680 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
TREML3P-202ENST00000564680 CECR2Q9BXF3 1484 aa21.87■■□□□ 1.09
TREML3P-202ENST00000564680 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
TREML3P-202ENST00000564680 SMARCA2P51531 1590 aa21.73■■□□□ 1.07
TREML3P-202ENST00000564680 MROH2BQ7Z745 1585 aa21.72■■□□□ 1.07
TREML3P-202ENST00000564680 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
TREML3P-202ENST00000564680 ATAD2BQ9ULI0 1458 aa21.63■■□□□ 1.05
TREML3P-202ENST00000564680 HMGXB3Q12766 1538 aa21.61■■□□□ 1.05
TREML3P-202ENST00000564680 WIZO95785 1651 aa21.59■■□□□ 1.05
TREML3P-202ENST00000564680 NCAPD3P42695 1498 aa21.54■■□□□ 1.04
TREML3P-202ENST00000564680 BAZ1BQ9UIG0 1483 aaKnown RBP21.54■■□□□ 1.04
TREML3P-202ENST00000564680 RSF1Q96T23 1441 aaPredicted RBP21.49■■□□□ 1.03
TREML3P-202ENST00000564680 TOP2AP11388 1531 aaKnown RBP21.38■■□□□ 1.01
TREML3P-202ENST00000564680 LAMC3Q9Y6N6 1575 aa21.1■□□□□ 0.97
TREML3P-202ENST00000564680 SUPT5HO00267 1087 aaKnown RBP21.09■□□□□ 0.97
TREML3P-202ENST00000564680 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
TREML3P-202ENST00000564680 NESP48681 1621 aa21■□□□□ 0.95
TREML3P-202ENST00000564680 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
TREML3P-202ENST00000564680 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
TREML3P-202ENST00000564680 ERCC6Q03468 1493 aa20.93■□□□□ 0.94
TREML3P-202ENST00000564680 CADPSQ9ULU8 1353 aa20.92■□□□□ 0.94
TREML3P-202ENST00000564680 CFTRP13569 1480 aa20.88■□□□□ 0.93
TREML3P-202ENST00000564680 PDS5BQ9NTI5 1447 aa20.85■□□□□ 0.93
TREML3P-202ENST00000564680 THOC2Q8NI27 1593 aaKnown RBP20.78■□□□□ 0.92
TREML3P-202ENST00000564680 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
TREML3P-202ENST00000564680 FANCD2Q9BXW9 1451 aa20.76■□□□□ 0.91
TREML3P-202ENST00000564680 MRC2Q9UBG0 1479 aa20.68■□□□□ 0.9
TREML3P-202ENST00000564680 WDR62O43379 1518 aa20.62■□□□□ 0.89
TREML3P-202ENST00000564680 CUX2O14529 1486 aa20.6■□□□□ 0.89
TREML3P-202ENST00000564680 DNMBPQ6XZF7 1577 aa20.54■□□□□ 0.88
TREML3P-202ENST00000564680 URB2Q14146 1524 aaKnown RBP20.53■□□□□ 0.88
TREML3P-202ENST00000564680 ABCC8Q09428 1581 aa20.49■□□□□ 0.87
TREML3P-202ENST00000564680 TOPBP1Q92547 1522 aa20.47■□□□□ 0.87
TREML3P-202ENST00000564680 CUX1P39880 1505 aa20.4■□□□□ 0.86
TREML3P-202ENST00000564680 BIVM-ERCC5R4GMW8 1640 aa20.39■□□□□ 0.86
TREML3P-202ENST00000564680 TOP2BQ02880 1626 aa20.34■□□□□ 0.85
TREML3P-202ENST00000564680 SYNJ1O43426 1573 aa20.34■□□□□ 0.85
TREML3P-202ENST00000564680 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.84
TREML3P-202ENST00000564680 FGD5Q6ZNL6 1462 aa20.3■□□□□ 0.84
TREML3P-202ENST00000564680 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
TREML3P-202ENST00000564680 IFT140Q96RY7 1462 aa20.29■□□□□ 0.84
TREML3P-202ENST00000564680 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
TREML3P-202ENST00000564680 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.83
TREML3P-202ENST00000564680 EIF4G3O43432 1585 aaKnown RBP20.22■□□□□ 0.83
TREML3P-202ENST00000564680 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
TREML3P-202ENST00000564680 SOGA1O94964 1423 aa20.15■□□□□ 0.82
TREML3P-202ENST00000564680 PBRM1Q86U86 1689 aa20.15■□□□□ 0.82
TREML3P-202ENST00000564680 ZNF608Q9ULD9 1512 aaPredicted RBP20.12■□□□□ 0.81
TREML3P-202ENST00000564680 ABCA10Q8WWZ4 1543 aa20.1■□□□□ 0.81
TREML3P-202ENST00000564680 ABCA5Q8WWZ7 1642 aa20.09■□□□□ 0.81
TREML3P-202ENST00000564680 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.79
TREML3P-202ENST00000564680 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
TREML3P-202ENST00000564680 CHD1O14646 1710 aa19.99■□□□□ 0.79
TREML3P-202ENST00000564680 TDRD9Q8NDG6 1382 aaKnown RBP19.98■□□□□ 0.79
TREML3P-202ENST00000564680 GRIN2BQ13224 1484 aa19.96■□□□□ 0.79
TREML3P-202ENST00000564680 SNAPC4Q5SXM2 1469 aa19.93■□□□□ 0.78
TREML3P-202ENST00000564680 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
TREML3P-202ENST00000564680 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
TREML3P-202ENST00000564680 ERICH3Q5RHP9 1530 aa19.91■□□□□ 0.78
TREML3P-202ENST00000564680 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
TREML3P-202ENST00000564680 KIF27Q86VH2 1401 aa19.89■□□□□ 0.77
TREML3P-202ENST00000564680 CUL7Q14999 1698 aa19.88■□□□□ 0.77
TREML3P-202ENST00000564680 SYNJ2O15056 1496 aa19.81■□□□□ 0.76
TREML3P-202ENST00000564680 CHIC1Q5VXU3 224 aa19.76■□□□□ 0.75
TREML3P-202ENST00000564680 FHAD1B1AJZ9 1412 aa19.75■□□□□ 0.75
TREML3P-202ENST00000564680 FBLN2P98095 1184 aa19.72■□□□□ 0.75
TREML3P-202ENST00000564680 GRIN2AQ12879 1464 aa19.72■□□□□ 0.75
TREML3P-202ENST00000564680 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
TREML3P-202ENST00000564680 CHMP7Q8WUX9 453 aaPredicted RBP19.69■□□□□ 0.74
TREML3P-202ENST00000564680 EEA1Q15075 1411 aa19.68■□□□□ 0.74
TREML3P-202ENST00000564680 IGF1RP08069 1367 aa19.65■□□□□ 0.74
TREML3P-202ENST00000564680 CLASP1Q7Z460 1538 aa19.64■□□□□ 0.73
TREML3P-202ENST00000564680 CEP170Q5SW79 1584 aa19.64■□□□□ 0.73
TREML3P-202ENST00000564680 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
TREML3P-202ENST00000564680 CTTNBP2Q8WZ74 1663 aa19.62■□□□□ 0.73
TREML3P-202ENST00000564680 CARMIL1Q5VZK9 1371 aa19.6■□□□□ 0.73
TREML3P-202ENST00000564680 NUP160Q12769 1436 aa19.59■□□□□ 0.73
TREML3P-202ENST00000564680 RAPGEF2Q9Y4G8 1499 aa19.58■□□□□ 0.72
TREML3P-202ENST00000564680 KIF21BO75037 1637 aa19.54■□□□□ 0.72
TREML3P-202ENST00000564680 PRXQ9BXM0 1461 aa19.52■□□□□ 0.72
TREML3P-202ENST00000564680 SHROOM2Q13796 1616 aa19.51■□□□□ 0.71
TREML3P-202ENST00000564680 DNAJC5Q9H3Z4 198 aa19.5■□□□□ 0.71
TREML3P-202ENST00000564680 RIMBP3CA6NJZ7 1639 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms