RNA–Protein interactions for RNA: ENST00000564668.5

EARS2-211, Transcript of glutamyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 4

Gene EARS2, Length 627 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EARS2-211ENST00000564668 NISCHQ9Y2I1 1504 aa37.69■■■■□ 3.62
EARS2-211ENST00000564668 CCDC180Q9P1Z9 1646 aa33.59■■■□□ 2.97
EARS2-211ENST00000564668 ABCC9O60706 1549 aa32.91■■■□□ 2.86
EARS2-211ENST00000564668 RB1CC1Q8TDY2 1594 aa31.64■■■□□ 2.66
EARS2-211ENST00000564668 NACADO15069 1562 aa31.59■■■□□ 2.65
EARS2-211ENST00000564668 DCAF8L2P0C7V8 631 aa31.52■■■□□ 2.64
EARS2-211ENST00000564668 ZCCHC6Q5VYS8 1495 aaKnown RBP31.38■■■□□ 2.61
EARS2-211ENST00000564668 MYO15BQ96JP2 1530 aa31.37■■■□□ 2.61
EARS2-211ENST00000564668 DCAF1Q9Y4B6 1507 aa31.2■■■□□ 2.59
EARS2-211ENST00000564668 DNAJC5BQ9UF47 199 aa31.14■■■□□ 2.58
EARS2-211ENST00000564668 UNC13AQ9UPW8 1703 aa30.9■■■□□ 2.54
EARS2-211ENST00000564668 PABPN1Q86U42 306 aaKnown RBP eCLIP30.67■■■□□ 2.5
EARS2-211ENST00000564668 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
EARS2-211ENST00000564668 SCRIBQ14160 1630 aa30.59■■■□□ 2.49
EARS2-211ENST00000564668 SHROOM4Q9ULL8 1493 aa30.38■■■□□ 2.45
EARS2-211ENST00000564668 EIF4G1Q04637 1599 aaKnown RBP29.85■■■□□ 2.37
EARS2-211ENST00000564668 CC2D2AQ9P2K1 1620 aa29.78■■■□□ 2.36
EARS2-211ENST00000564668 CECR2Q9BXF3 1484 aa29.65■■■□□ 2.34
EARS2-211ENST00000564668 SMARCA4P51532 1647 aa29.27■■■□□ 2.28
EARS2-211ENST00000564668 BAZ1AQ9NRL2 1556 aaPredicted RBP29.25■■■□□ 2.27
EARS2-211ENST00000564668 SMARCA2P51531 1590 aa29.12■■■□□ 2.25
EARS2-211ENST00000564668 NCAPD3P42695 1498 aa29.11■■■□□ 2.25
EARS2-211ENST00000564668 ATAD2BQ9ULI0 1458 aa29.11■■■□□ 2.25
EARS2-211ENST00000564668 MROH2BQ7Z745 1585 aa29.02■■■□□ 2.24
EARS2-211ENST00000564668 PEG3Q9GZU2 1588 aa28.99■■■□□ 2.23
EARS2-211ENST00000564668 HMGXB3Q12766 1538 aa28.99■■■□□ 2.23
EARS2-211ENST00000564668 BAZ1BQ9UIG0 1483 aaKnown RBP28.9■■■□□ 2.22
EARS2-211ENST00000564668 WIZO95785 1651 aa28.73■■■□□ 2.19
EARS2-211ENST00000564668 RSF1Q96T23 1441 aaPredicted RBP28.67■■■□□ 2.18
EARS2-211ENST00000564668 DNAJC5Q9H3Z4 198 aa28.6■■■□□ 2.17
EARS2-211ENST00000564668 TOP2AP11388 1531 aaKnown RBP28.43■■■□□ 2.14
EARS2-211ENST00000564668 CUX2O14529 1486 aa28.41■■■□□ 2.14
EARS2-211ENST00000564668 NESP48681 1621 aa28.4■■■□□ 2.14
EARS2-211ENST00000564668 LAMC3Q9Y6N6 1575 aa28.39■■■□□ 2.14
EARS2-211ENST00000564668 ERCC6Q03468 1493 aa28.38■■■□□ 2.13
EARS2-211ENST00000564668 CADPSQ9ULU8 1353 aa28.26■■■□□ 2.12
EARS2-211ENST00000564668 PDS5BQ9NTI5 1447 aa28.2■■■□□ 2.11
EARS2-211ENST00000564668 KIF21AQ7Z4S6 1674 aa28.11■■■□□ 2.09
EARS2-211ENST00000564668 CFTRP13569 1480 aa28.08■■■□□ 2.09
EARS2-211ENST00000564668 THOC2Q8NI27 1593 aaKnown RBP28.07■■■□□ 2.08
EARS2-211ENST00000564668 CCDC88BA6NC98 1476 aa28.07■■■□□ 2.08
EARS2-211ENST00000564668 FANCD2Q9BXW9 1451 aa27.95■■■□□ 2.06
EARS2-211ENST00000564668 CEP164Q9UPV0 1460 aa27.94■■■□□ 2.06
EARS2-211ENST00000564668 PRDM2Q13029 1718 aa27.93■■■□□ 2.06
EARS2-211ENST00000564668 SUPT5HO00267 1087 aaKnown RBP27.91■■■□□ 2.06
EARS2-211ENST00000564668 MRC2Q9UBG0 1479 aa27.89■■■□□ 2.06
EARS2-211ENST00000564668 WDR62O43379 1518 aa27.8■■■□□ 2.04
EARS2-211ENST00000564668 URB2Q14146 1524 aaKnown RBP27.64■■■□□ 2.02
EARS2-211ENST00000564668 ABCC8Q09428 1581 aa27.53■■■□□ 2
EARS2-211ENST00000564668 TOPBP1Q92547 1522 aa27.49■■□□□ 1.99
EARS2-211ENST00000564668 DNMBPQ6XZF7 1577 aa27.47■■□□□ 1.99
EARS2-211ENST00000564668 IFT140Q96RY7 1462 aa27.34■■□□□ 1.97
EARS2-211ENST00000564668 POLA1P09884 1462 aaPredicted RBP27.25■■□□□ 1.95
EARS2-211ENST00000564668 CUX1P39880 1505 aa27.24■■□□□ 1.95
EARS2-211ENST00000564668 TARBP1Q13395 1621 aaKnown RBP27.19■■□□□ 1.94
EARS2-211ENST00000564668 ZNF608Q9ULD9 1512 aaPredicted RBP27.18■■□□□ 1.94
EARS2-211ENST00000564668 FGD5Q6ZNL6 1462 aa27.18■■□□□ 1.94
EARS2-211ENST00000564668 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
EARS2-211ENST00000564668 SOGA1O94964 1423 aa27.14■■□□□ 1.93
EARS2-211ENST00000564668 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
EARS2-211ENST00000564668 RAD54L2Q9Y4B4 1467 aa27.1■■□□□ 1.93
EARS2-211ENST00000564668 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
EARS2-211ENST00000564668 WDR97A6NE52 1622 aa27.03■■□□□ 1.92
EARS2-211ENST00000564668 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.92
EARS2-211ENST00000564668 BIVM-ERCC5R4GMW8 1640 aa27.02■■□□□ 1.92
EARS2-211ENST00000564668 TOP2BQ02880 1626 aa27.01■■□□□ 1.92
EARS2-211ENST00000564668 OSCARQ8IYS5 282 aa27.01■■□□□ 1.91
EARS2-211ENST00000564668 SYNJ1O43426 1573 aa26.98■■□□□ 1.91
EARS2-211ENST00000564668 TDRD9Q8NDG6 1382 aaKnown RBP26.97■■□□□ 1.91
EARS2-211ENST00000564668 ABCA10Q8WWZ4 1543 aa26.91■■□□□ 1.9
EARS2-211ENST00000564668 GRIN2BQ13224 1484 aa26.85■■□□□ 1.89
EARS2-211ENST00000564668 GAPVD1Q14C86 1478 aa26.84■■□□□ 1.89
EARS2-211ENST00000564668 RIMBP3CA6NJZ7 1639 aa26.83■■□□□ 1.88
EARS2-211ENST00000564668 RIMBP3BA6NNM3 1639 aa26.83■■□□□ 1.88
EARS2-211ENST00000564668 RIMBP3Q9UFD9 1639 aa26.83■■□□□ 1.88
EARS2-211ENST00000564668 ABCA5Q8WWZ7 1642 aa26.81■■□□□ 1.88
EARS2-211ENST00000564668 PBRM1Q86U86 1689 aa26.8■■□□□ 1.88
EARS2-211ENST00000564668 SNAPC4Q5SXM2 1469 aa26.8■■□□□ 1.88
EARS2-211ENST00000564668 CHD1O14646 1710 aa26.79■■□□□ 1.88
EARS2-211ENST00000564668 MAGI1Q96QZ7 1491 aaPredicted RBP26.79■■□□□ 1.88
EARS2-211ENST00000564668 FBLN2P98095 1184 aa26.76■■□□□ 1.87
EARS2-211ENST00000564668 ARHGEF11O15085 1522 aa26.7■■□□□ 1.86
EARS2-211ENST00000564668 CHMP7Q8WUX9 453 aaPredicted RBP26.68■■□□□ 1.86
EARS2-211ENST00000564668 SYNJ2O15056 1496 aa26.68■■□□□ 1.86
EARS2-211ENST00000564668 ERICH3Q5RHP9 1530 aa26.61■■□□□ 1.85
EARS2-211ENST00000564668 ADAMTS12P58397 1594 aa26.56■■□□□ 1.84
EARS2-211ENST00000564668 FHAD1B1AJZ9 1412 aa26.52■■□□□ 1.84
EARS2-211ENST00000564668 KIF27Q86VH2 1401 aa26.52■■□□□ 1.84
EARS2-211ENST00000564668 GRIN2AQ12879 1464 aa26.49■■□□□ 1.83
EARS2-211ENST00000564668 CLASP1Q7Z460 1538 aa26.48■■□□□ 1.83
EARS2-211ENST00000564668 ARAP1Q96P48 1450 aa26.45■■□□□ 1.82
EARS2-211ENST00000564668 CYB5RLQ6IPT4 315 aa26.41■■□□□ 1.82
EARS2-211ENST00000564668 CUL7Q14999 1698 aa26.38■■□□□ 1.81
EARS2-211ENST00000564668 IGF1RP08069 1367 aa26.38■■□□□ 1.81
EARS2-211ENST00000564668 NUP160Q12769 1436 aa26.37■■□□□ 1.81
EARS2-211ENST00000564668 CEP170Q5SW79 1584 aa26.34■■□□□ 1.81
EARS2-211ENST00000564668 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
EARS2-211ENST00000564668 SHROOM2Q13796 1616 aa26.19■■□□□ 1.78
EARS2-211ENST00000564668 RUSC2Q8N2Y8 1516 aa26.19■■□□□ 1.78
EARS2-211ENST00000564668 KIAA0586Q9BVV6 1533 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms