RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 NISCHQ9Y2I1 1504 aa50.42■■■■■ 5.66
COTL1-204ENST00000564662 CCDC180Q9P1Z9 1646 aa45.37■■■■■ 4.85
COTL1-204ENST00000564662 ABCC9O60706 1549 aa45.22■■■■■ 4.83
COTL1-204ENST00000564662 RB1CC1Q8TDY2 1594 aa43.1■■■■■ 4.49
COTL1-204ENST00000564662 NACADO15069 1562 aa42.77■■■■■ 4.44
COTL1-204ENST00000564662 DCAF8L2P0C7V8 631 aa42.44■■■■■ 4.38
COTL1-204ENST00000564662 UNC13AQ9UPW8 1703 aa42.29■■■■■ 4.36
COTL1-204ENST00000564662 DNAJC5BQ9UF47 199 aa42.24■■■■■ 4.35
COTL1-204ENST00000564662 MYO15BQ96JP2 1530 aa42.14■■■■■ 4.34
COTL1-204ENST00000564662 PABPN1Q86U42 306 aaKnown RBP eCLIP42.01■■■■■ 4.32
COTL1-204ENST00000564662 BICRAQ9NZM4 1560 aa41.84■■■■■ 4.29
COTL1-204ENST00000564662 ZCCHC6Q5VYS8 1495 aaKnown RBP41.84■■■■■ 4.29
COTL1-204ENST00000564662 DCAF1Q9Y4B6 1507 aa41.64■■■■■ 4.26
COTL1-204ENST00000564662 SCRIBQ14160 1630 aa41.35■■■■■ 4.21
COTL1-204ENST00000564662 SHROOM4Q9ULL8 1493 aa41.23■■■■■ 4.19
COTL1-204ENST00000564662 CC2D2AQ9P2K1 1620 aa40.9■■■■■ 4.14
COTL1-204ENST00000564662 EIF4G1Q04637 1599 aaKnown RBP40.81■■■■■ 4.12
COTL1-204ENST00000564662 CECR2Q9BXF3 1484 aa40.7■■■■■ 4.11
COTL1-204ENST00000564662 SMARCA4P51532 1647 aa39.41■■■■□ 3.9
COTL1-204ENST00000564662 NCAPD3P42695 1498 aa39.4■■■■□ 3.9
COTL1-204ENST00000564662 ATAD2BQ9ULI0 1458 aa39.32■■■■□ 3.89
COTL1-204ENST00000564662 SMARCA2P51531 1590 aa39.29■■■■□ 3.88
COTL1-204ENST00000564662 HMGXB3Q12766 1538 aa39.24■■■■□ 3.87
COTL1-204ENST00000564662 BAZ1AQ9NRL2 1556 aaPredicted RBP39.17■■■■□ 3.86
COTL1-204ENST00000564662 ERCC6Q03468 1493 aa39.05■■■■□ 3.84
COTL1-204ENST00000564662 BAZ1BQ9UIG0 1483 aaKnown RBP39.01■■■■□ 3.84
COTL1-204ENST00000564662 PEG3Q9GZU2 1588 aa38.97■■■■□ 3.83
COTL1-204ENST00000564662 CUX2O14529 1486 aa38.94■■■■□ 3.82
COTL1-204ENST00000564662 MROH2BQ7Z745 1585 aa38.87■■■■□ 3.81
COTL1-204ENST00000564662 NESP48681 1621 aa38.87■■■■□ 3.81
COTL1-204ENST00000564662 DNAJC5Q9H3Z4 198 aa38.74■■■■□ 3.79
COTL1-204ENST00000564662 LAMC3Q9Y6N6 1575 aa38.63■■■■□ 3.77
COTL1-204ENST00000564662 THOC2Q8NI27 1593 aaKnown RBP38.56■■■■□ 3.76
COTL1-204ENST00000564662 KIF21AQ7Z4S6 1674 aa38.51■■■■□ 3.76
COTL1-204ENST00000564662 WIZO95785 1651 aa38.49■■■■□ 3.75
COTL1-204ENST00000564662 PDS5BQ9NTI5 1447 aa38.3■■■■□ 3.72
COTL1-204ENST00000564662 CADPSQ9ULU8 1353 aa38.19■■■■□ 3.7
COTL1-204ENST00000564662 MRC2Q9UBG0 1479 aa38.04■■■■□ 3.68
COTL1-204ENST00000564662 RSF1Q96T23 1441 aaPredicted RBP38.01■■■■□ 3.68
COTL1-204ENST00000564662 WDR62O43379 1518 aa37.97■■■■□ 3.67
COTL1-204ENST00000564662 TOP2AP11388 1531 aaKnown RBP37.97■■■■□ 3.67
COTL1-204ENST00000564662 CEP164Q9UPV0 1460 aa37.91■■■■□ 3.66
COTL1-204ENST00000564662 FANCD2Q9BXW9 1451 aa37.84■■■■□ 3.65
COTL1-204ENST00000564662 CFTRP13569 1480 aa37.81■■■■□ 3.64
COTL1-204ENST00000564662 PRDM2Q13029 1718 aa37.7■■■■□ 3.63
COTL1-204ENST00000564662 URB2Q14146 1524 aaKnown RBP37.56■■■■□ 3.6
COTL1-204ENST00000564662 CCDC88BA6NC98 1476 aa37.45■■■■□ 3.59
COTL1-204ENST00000564662 TRIM41Q8WV44 630 aa37.15■■■■□ 3.54
COTL1-204ENST00000564662 TOPBP1Q92547 1522 aa37.15■■■■□ 3.54
COTL1-204ENST00000564662 IFT140Q96RY7 1462 aa37.11■■■■□ 3.53
COTL1-204ENST00000564662 ZNF608Q9ULD9 1512 aaPredicted RBP37.06■■■■□ 3.52
COTL1-204ENST00000564662 DNMBPQ6XZF7 1577 aa37.06■■■■□ 3.52
COTL1-204ENST00000564662 OSCARQ8IYS5 282 aa37.04■■■■□ 3.52
COTL1-204ENST00000564662 ABCC8Q09428 1581 aa37.01■■■■□ 3.52
COTL1-204ENST00000564662 EIF4G3O43432 1585 aaKnown RBP36.99■■■■□ 3.51
COTL1-204ENST00000564662 TARBP1Q13395 1621 aaKnown RBP36.86■■■■□ 3.49
COTL1-204ENST00000564662 RIMBP3CA6NJZ7 1639 aa36.78■■■■□ 3.48
COTL1-204ENST00000564662 RIMBP3BA6NNM3 1639 aa36.78■■■■□ 3.48
COTL1-204ENST00000564662 RIMBP3Q9UFD9 1639 aa36.78■■■■□ 3.48
COTL1-204ENST00000564662 POLA1P09884 1462 aaPredicted RBP36.76■■■■□ 3.48
COTL1-204ENST00000564662 CHD1O14646 1710 aa36.76■■■■□ 3.47
COTL1-204ENST00000564662 AQRO60306 1485 aaKnown RBP eCLIP36.69■■■■□ 3.463e-8■■■■■ 35
COTL1-204ENST00000564662 RAD54L2Q9Y4B4 1467 aa36.62■■■■□ 3.45
COTL1-204ENST00000564662 ARHGEF11O15085 1522 aa36.61■■■■□ 3.45
COTL1-204ENST00000564662 FGD5Q6ZNL6 1462 aa36.56■■■■□ 3.44
COTL1-204ENST00000564662 CUX1P39880 1505 aa36.54■■■■□ 3.44
COTL1-204ENST00000564662 SOGA1O94964 1423 aa36.53■■■■□ 3.44
COTL1-204ENST00000564662 WDR97A6NE52 1622 aa36.48■■■■□ 3.43
COTL1-204ENST00000564662 TDRD9Q8NDG6 1382 aaKnown RBP36.46■■■■□ 3.43
COTL1-204ENST00000564662 FBLN2P98095 1184 aa36.42■■■■□ 3.42
COTL1-204ENST00000564662 SNAPC4Q5SXM2 1469 aa36.39■■■■□ 3.42
COTL1-204ENST00000564662 SUPT5HO00267 1087 aaKnown RBP36.34■■■■□ 3.41
COTL1-204ENST00000564662 PBRM1Q86U86 1689 aa36.31■■■■□ 3.4
COTL1-204ENST00000564662 MAGI1Q96QZ7 1491 aaPredicted RBP36.27■■■■□ 3.4
COTL1-204ENST00000564662 GRIN2BQ13224 1484 aa36.25■■■■□ 3.39
COTL1-204ENST00000564662 ARAP1Q96P48 1450 aa36.25■■■■□ 3.39
COTL1-204ENST00000564662 CLASP1Q7Z460 1538 aa36.22■■■■□ 3.39
COTL1-204ENST00000564662 SYNJ1O43426 1573 aa36.21■■■■□ 3.39
COTL1-204ENST00000564662 CYB5RLQ6IPT4 315 aa36.2■■■■□ 3.39
COTL1-204ENST00000564662 ABCA5Q8WWZ7 1642 aa36.16■■■■□ 3.38
COTL1-204ENST00000564662 SYNJ2O15056 1496 aa36.14■■■■□ 3.38
COTL1-204ENST00000564662 GAPVD1Q14C86 1478 aa36.13■■■■□ 3.37
COTL1-204ENST00000564662 CHMP7Q8WUX9 453 aaPredicted RBP36.13■■■■□ 3.37
COTL1-204ENST00000564662 ABCA10Q8WWZ4 1543 aa36.12■■■■□ 3.37
COTL1-204ENST00000564662 BIVM-ERCC5R4GMW8 1640 aa36.04■■■■□ 3.36
COTL1-204ENST00000564662 TOP2BQ02880 1626 aa35.99■■■■□ 3.35
COTL1-204ENST00000564662 WRNQ14191 1432 aaPredicted RBP eCLIP35.94■■■■□ 3.34
COTL1-204ENST00000564662 ADAMTS12P58397 1594 aa35.89■■■■□ 3.34
COTL1-204ENST00000564662 TRHP20396 242 aaPredicted RBP35.84■■■■□ 3.33
COTL1-204ENST00000564662 GRIN2AQ12879 1464 aa35.82■■■■□ 3.32
COTL1-204ENST00000564662 CEP170Q5SW79 1584 aa35.75■■■■□ 3.31
COTL1-204ENST00000564662 ERICH3Q5RHP9 1530 aa35.68■■■■□ 3.3
COTL1-204ENST00000564662 ERCC6L2Q5T890 1561 aa35.67■■■■□ 3.3
COTL1-204ENST00000564662 FHAD1B1AJZ9 1412 aa35.66■■■■□ 3.3
COTL1-204ENST00000564662 NUP160Q12769 1436 aa35.66■■■■□ 3.3
COTL1-204ENST00000564662 SHROOM2Q13796 1616 aa35.6■■■■□ 3.29
COTL1-204ENST00000564662 RUSC2Q8N2Y8 1516 aa35.4■■■■□ 3.26
COTL1-204ENST00000564662 PRG4Q92954 1404 aaPredicted RBP35.31■■■■□ 3.24
COTL1-204ENST00000564662 CUL7Q14999 1698 aa35.26■■■■□ 3.23
COTL1-204ENST00000564662 KIF27Q86VH2 1401 aa35.19■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms