RNA–Protein interactions for RNA: ENST00000564590.5

SCAPER-212, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 2,507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-212ENST00000564590 NISCHQ9Y2I1 1504 aa31.67■■■□□ 2.66
SCAPER-212ENST00000564590 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
SCAPER-212ENST00000564590 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
SCAPER-212ENST00000564590 ZCCHC6Q5VYS8 1495 aaKnown RBP26.59■■□□□ 1.85
SCAPER-212ENST00000564590 ABCC9O60706 1549 aa26.36■■□□□ 1.81
SCAPER-212ENST00000564590 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
SCAPER-212ENST00000564590 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
SCAPER-212ENST00000564590 SCRIBQ14160 1630 aa25.59■■□□□ 1.69
SCAPER-212ENST00000564590 NACADO15069 1562 aa25.57■■□□□ 1.68
SCAPER-212ENST00000564590 MYO15BQ96JP2 1530 aa25.57■■□□□ 1.68
SCAPER-212ENST00000564590 RB1CC1Q8TDY2 1594 aa25.42■■□□□ 1.66
SCAPER-212ENST00000564590 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
SCAPER-212ENST00000564590 UNC13AQ9UPW8 1703 aa25.05■■□□□ 1.6
SCAPER-212ENST00000564590 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
SCAPER-212ENST00000564590 CECR2Q9BXF3 1484 aa24.81■■□□□ 1.56
SCAPER-212ENST00000564590 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
SCAPER-212ENST00000564590 RSF1Q96T23 1441 aaPredicted RBP24.66■■□□□ 1.54
SCAPER-212ENST00000564590 MROH2BQ7Z745 1585 aa24.6■■□□□ 1.53
SCAPER-212ENST00000564590 WIZO95785 1651 aa24.43■■□□□ 1.5
SCAPER-212ENST00000564590 BAZ1AQ9NRL2 1556 aaPredicted RBP24.41■■□□□ 1.5
SCAPER-212ENST00000564590 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
SCAPER-212ENST00000564590 EIF4G1Q04637 1599 aaKnown RBP24.03■■□□□ 1.44
SCAPER-212ENST00000564590 CHIC1Q5VXU3 224 aa24.03■■□□□ 1.44
SCAPER-212ENST00000564590 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
SCAPER-212ENST00000564590 ATAD2BQ9ULI0 1458 aa23.97■■□□□ 1.43
SCAPER-212ENST00000564590 PEG3Q9GZU2 1588 aa23.9■■□□□ 1.42
SCAPER-212ENST00000564590 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
SCAPER-212ENST00000564590 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
SCAPER-212ENST00000564590 SMARCA2P51531 1590 aa23.84■■□□□ 1.41
SCAPER-212ENST00000564590 CC2D2AQ9P2K1 1620 aa23.71■■□□□ 1.39
SCAPER-212ENST00000564590 NCAPD3P42695 1498 aa23.66■■□□□ 1.38
SCAPER-212ENST00000564590 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
SCAPER-212ENST00000564590 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
SCAPER-212ENST00000564590 ABCC8Q09428 1581 aa23.53■■□□□ 1.36
SCAPER-212ENST00000564590 DNAJC5BQ9UF47 199 aa23.48■■□□□ 1.35
SCAPER-212ENST00000564590 FAM9AQ8IZU1 332 aaPredicted RBP23.44■■□□□ 1.34
SCAPER-212ENST00000564590 EHMT2Q96KQ7 1210 aa23.33■■□□□ 1.33
SCAPER-212ENST00000564590 LOC105371045A0A1W2PR82 267 aa23.32■■□□□ 1.32
SCAPER-212ENST00000564590 WRNQ14191 1432 aaPredicted RBP eCLIP23.21■■□□□ 1.31
SCAPER-212ENST00000564590 CFTRP13569 1480 aa23.2■■□□□ 1.3
SCAPER-212ENST00000564590 NESP48681 1621 aa23.17■■□□□ 1.3
SCAPER-212ENST00000564590 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
SCAPER-212ENST00000564590 CADPSQ9ULU8 1353 aa23.15■■□□□ 1.3
SCAPER-212ENST00000564590 SOGA1O94964 1423 aa23.07■■□□□ 1.28
SCAPER-212ENST00000564590 RUSC2Q8N2Y8 1516 aa23.03■■□□□ 1.28
SCAPER-212ENST00000564590 CUX1P39880 1505 aa22.97■■□□□ 1.27
SCAPER-212ENST00000564590 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
SCAPER-212ENST00000564590 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.26
SCAPER-212ENST00000564590 TOP2BQ02880 1626 aa22.92■■□□□ 1.26
SCAPER-212ENST00000564590 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
SCAPER-212ENST00000564590 LAMC3Q9Y6N6 1575 aa22.84■■□□□ 1.25
SCAPER-212ENST00000564590 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
SCAPER-212ENST00000564590 KIF21AQ7Z4S6 1674 aa22.76■■□□□ 1.23
SCAPER-212ENST00000564590 CEP164Q9UPV0 1460 aa22.76■■□□□ 1.23
SCAPER-212ENST00000564590 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
SCAPER-212ENST00000564590 PDS5BQ9NTI5 1447 aa22.72■■□□□ 1.23
SCAPER-212ENST00000564590 URB2Q14146 1524 aaKnown RBP22.68■■□□□ 1.22
SCAPER-212ENST00000564590 TOPBP1Q92547 1522 aa22.68■■□□□ 1.22
SCAPER-212ENST00000564590 EEA1Q15075 1411 aa22.66■■□□□ 1.22
SCAPER-212ENST00000564590 RAD54L2Q9Y4B4 1467 aa22.65■■□□□ 1.22
SCAPER-212ENST00000564590 UBTFP17480 764 aaKnown RBP22.65■■□□□ 1.22
SCAPER-212ENST00000564590 DNMBPQ6XZF7 1577 aa22.64■■□□□ 1.21
SCAPER-212ENST00000564590 CUX2O14529 1486 aa22.61■■□□□ 1.21
SCAPER-212ENST00000564590 POLA1P09884 1462 aaPredicted RBP22.61■■□□□ 1.21
SCAPER-212ENST00000564590 RANGAP1P46060 587 aaPredicted RBP22.58■■□□□ 1.21
SCAPER-212ENST00000564590 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
SCAPER-212ENST00000564590 RAPGEF2Q9Y4G8 1499 aa22.56■■□□□ 1.2
SCAPER-212ENST00000564590 ERCC6Q03468 1493 aa22.52■■□□□ 1.2
SCAPER-212ENST00000564590 GOLGA3Q08378 1498 aa22.51■■□□□ 1.19
SCAPER-212ENST00000564590 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
SCAPER-212ENST00000564590 KIF21BO75037 1637 aa22.45■■□□□ 1.18
SCAPER-212ENST00000564590 MRC2Q9UBG0 1479 aa22.44■■□□□ 1.18
SCAPER-212ENST00000564590 CEP162Q5TB80 1403 aa22.44■■□□□ 1.18
SCAPER-212ENST00000564590 IGF1RP08069 1367 aa22.42■■□□□ 1.18
SCAPER-212ENST00000564590 TNIKQ9UKE5 1360 aa22.42■■□□□ 1.18
SCAPER-212ENST00000564590 PPARGC1BQ86YN6 1023 aaKnown RBP22.41■■□□□ 1.18
SCAPER-212ENST00000564590 PRXQ9BXM0 1461 aa22.4■■□□□ 1.18
SCAPER-212ENST00000564590 ABCA10Q8WWZ4 1543 aa22.4■■□□□ 1.18
SCAPER-212ENST00000564590 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
SCAPER-212ENST00000564590 WDR97A6NE52 1622 aa22.31■■□□□ 1.16
SCAPER-212ENST00000564590 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
SCAPER-212ENST00000564590 WDR62O43379 1518 aa22.29■■□□□ 1.16
SCAPER-212ENST00000564590 TTBK1Q5TCY1 1321 aaPredicted RBP22.29■■□□□ 1.16
SCAPER-212ENST00000564590 AQRO60306 1485 aaKnown RBP eCLIP22.29■■□□□ 1.16
SCAPER-212ENST00000564590 THOC2Q8NI27 1593 aaKnown RBP22.28■■□□□ 1.16
SCAPER-212ENST00000564590 ERICH3Q5RHP9 1530 aa22.27■■□□□ 1.16
SCAPER-212ENST00000564590 ZNF608Q9ULD9 1512 aaPredicted RBP22.27■■□□□ 1.15
SCAPER-212ENST00000564590 GAPVD1Q14C86 1478 aa22.26■■□□□ 1.15
SCAPER-212ENST00000564590 PCGF6Q9BYE7 350 aa22.25■■□□□ 1.15
SCAPER-212ENST00000564590 CLIP1P30622 1438 aa22.24■■□□□ 1.15
SCAPER-212ENST00000564590 ABCA5Q8WWZ7 1642 aa22.23■■□□□ 1.15
SCAPER-212ENST00000564590 IFT140Q96RY7 1462 aa22.13■■□□□ 1.13
SCAPER-212ENST00000564590 PBRM1Q86U86 1689 aa22.09■■□□□ 1.13
SCAPER-212ENST00000564590 CUL7Q14999 1698 aa22.09■■□□□ 1.13
SCAPER-212ENST00000564590 P3H3Q8IVL6 736 aa22.08■■□□□ 1.13
SCAPER-212ENST00000564590 EIF4G3O43432 1585 aaKnown RBP22.07■■□□□ 1.12
SCAPER-212ENST00000564590 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
SCAPER-212ENST00000564590 GRIN2BQ13224 1484 aa22.02■■□□□ 1.12
SCAPER-212ENST00000564590 ARHGAP35Q9NRY4 1499 aa22.01■■□□□ 1.11
SCAPER-212ENST00000564590 FBLN2P98095 1184 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms