RNA–Protein interactions for RNA: ENST00000564491.5

SCAMP5-207, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 4

Gene SCAMP5, Length 532 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-207ENST00000564491 NISCHQ9Y2I1 1504 aa36.08■■■■□ 3.37
SCAMP5-207ENST00000564491 CCDC180Q9P1Z9 1646 aa32.17■■■□□ 2.74
SCAMP5-207ENST00000564491 ABCC9O60706 1549 aa31.57■■■□□ 2.64
SCAMP5-207ENST00000564491 RB1CC1Q8TDY2 1594 aa30.42■■■□□ 2.46
SCAMP5-207ENST00000564491 NACADO15069 1562 aa30.37■■■□□ 2.45
SCAMP5-207ENST00000564491 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.43
SCAMP5-207ENST00000564491 MYO15BQ96JP2 1530 aa30.19■■■□□ 2.42
SCAMP5-207ENST00000564491 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
SCAMP5-207ENST00000564491 DCAF1Q9Y4B6 1507 aa29.95■■■□□ 2.38
SCAMP5-207ENST00000564491 PABPN1Q86U42 306 aaKnown RBP eCLIP29.48■■■□□ 2.31
SCAMP5-207ENST00000564491 UNC13AQ9UPW8 1703 aa29.46■■■□□ 2.31
SCAMP5-207ENST00000564491 BICRAQ9NZM4 1560 aa29.33■■■□□ 2.29
SCAMP5-207ENST00000564491 SHROOM4Q9ULL8 1493 aa29.31■■■□□ 2.28
SCAMP5-207ENST00000564491 SCRIBQ14160 1630 aa29.22■■■□□ 2.27
SCAMP5-207ENST00000564491 DNAJC5BQ9UF47 199 aa29.08■■■□□ 2.25
SCAMP5-207ENST00000564491 EIF4G1Q04637 1599 aaKnown RBP28.66■■■□□ 2.18
SCAMP5-207ENST00000564491 CC2D2AQ9P2K1 1620 aa28.55■■■□□ 2.16
SCAMP5-207ENST00000564491 CECR2Q9BXF3 1484 aa28.47■■■□□ 2.15
SCAMP5-207ENST00000564491 BAZ1AQ9NRL2 1556 aaPredicted RBP28.04■■■□□ 2.08
SCAMP5-207ENST00000564491 NCAPD3P42695 1498 aa28.02■■■□□ 2.08
SCAMP5-207ENST00000564491 SMARCA4P51532 1647 aa27.99■■■□□ 2.07
SCAMP5-207ENST00000564491 SMARCA2P51531 1590 aa27.97■■■□□ 2.07
SCAMP5-207ENST00000564491 ATAD2BQ9ULI0 1458 aa27.94■■■□□ 2.06
SCAMP5-207ENST00000564491 HMGXB3Q12766 1538 aa27.83■■■□□ 2.05
SCAMP5-207ENST00000564491 PEG3Q9GZU2 1588 aa27.79■■■□□ 2.04
SCAMP5-207ENST00000564491 BAZ1BQ9UIG0 1483 aaKnown RBP27.72■■■□□ 2.03
SCAMP5-207ENST00000564491 MROH2BQ7Z745 1585 aa27.72■■■□□ 2.03
SCAMP5-207ENST00000564491 RSF1Q96T23 1441 aaPredicted RBP27.41■■□□□ 1.98
SCAMP5-207ENST00000564491 WIZO95785 1651 aa27.36■■□□□ 1.97
SCAMP5-207ENST00000564491 ERCC6Q03468 1493 aa27.36■■□□□ 1.97
SCAMP5-207ENST00000564491 LAMC3Q9Y6N6 1575 aa27.29■■□□□ 1.96
SCAMP5-207ENST00000564491 NESP48681 1621 aa27.2■■□□□ 1.95
SCAMP5-207ENST00000564491 PDS5BQ9NTI5 1447 aa27.2■■□□□ 1.94
SCAMP5-207ENST00000564491 CADPSQ9ULU8 1353 aa27.2■■□□□ 1.94
SCAMP5-207ENST00000564491 TOP2AP11388 1531 aaKnown RBP27.19■■□□□ 1.94
SCAMP5-207ENST00000564491 CUX2O14529 1486 aa27.17■■□□□ 1.94
SCAMP5-207ENST00000564491 CFTRP13569 1480 aa26.96■■□□□ 1.91
SCAMP5-207ENST00000564491 THOC2Q8NI27 1593 aaKnown RBP26.86■■□□□ 1.89
SCAMP5-207ENST00000564491 KIF21AQ7Z4S6 1674 aa26.85■■□□□ 1.89
SCAMP5-207ENST00000564491 CCDC88BA6NC98 1476 aa26.85■■□□□ 1.89
SCAMP5-207ENST00000564491 CEP164Q9UPV0 1460 aa26.84■■□□□ 1.89
SCAMP5-207ENST00000564491 FANCD2Q9BXW9 1451 aa26.83■■□□□ 1.89
SCAMP5-207ENST00000564491 MRC2Q9UBG0 1479 aa26.82■■□□□ 1.88
SCAMP5-207ENST00000564491 WDR62O43379 1518 aa26.7■■□□□ 1.87
SCAMP5-207ENST00000564491 PRDM2Q13029 1718 aa26.62■■□□□ 1.85
SCAMP5-207ENST00000564491 SUPT5HO00267 1087 aaKnown RBP26.58■■□□□ 1.85
SCAMP5-207ENST00000564491 DNAJC5Q9H3Z4 198 aa26.54■■□□□ 1.84
SCAMP5-207ENST00000564491 ABCC8Q09428 1581 aa26.53■■□□□ 1.84
SCAMP5-207ENST00000564491 URB2Q14146 1524 aaKnown RBP26.49■■□□□ 1.83
SCAMP5-207ENST00000564491 TOPBP1Q92547 1522 aa26.34■■□□□ 1.81
SCAMP5-207ENST00000564491 IFT140Q96RY7 1462 aa26.32■■□□□ 1.8
SCAMP5-207ENST00000564491 DNMBPQ6XZF7 1577 aa26.32■■□□□ 1.8
SCAMP5-207ENST00000564491 POLA1P09884 1462 aaPredicted RBP26.11■■□□□ 1.77
SCAMP5-207ENST00000564491 SOGA1O94964 1423 aa26.07■■□□□ 1.76
SCAMP5-207ENST00000564491 OSCARQ8IYS5 282 aa26.06■■□□□ 1.76
SCAMP5-207ENST00000564491 ZNF608Q9ULD9 1512 aaPredicted RBP26.05■■□□□ 1.76
SCAMP5-207ENST00000564491 CUX1P39880 1505 aa26.02■■□□□ 1.76
SCAMP5-207ENST00000564491 TARBP1Q13395 1621 aaKnown RBP26.02■■□□□ 1.76
SCAMP5-207ENST00000564491 FGD5Q6ZNL6 1462 aa26.01■■□□□ 1.75
SCAMP5-207ENST00000564491 WDR97A6NE52 1622 aa25.99■■□□□ 1.75
SCAMP5-207ENST00000564491 EIF4G3O43432 1585 aaKnown RBP25.96■■□□□ 1.75
SCAMP5-207ENST00000564491 RAD54L2Q9Y4B4 1467 aa25.94■■□□□ 1.74
SCAMP5-207ENST00000564491 AQRO60306 1485 aaKnown RBP eCLIP25.93■■□□□ 1.74
SCAMP5-207ENST00000564491 WRNQ14191 1432 aaPredicted RBP eCLIP25.9■■□□□ 1.74
SCAMP5-207ENST00000564491 TDRD9Q8NDG6 1382 aaKnown RBP25.88■■□□□ 1.73
SCAMP5-207ENST00000564491 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
SCAMP5-207ENST00000564491 ABCA10Q8WWZ4 1543 aa25.81■■□□□ 1.72
SCAMP5-207ENST00000564491 GRIN2BQ13224 1484 aa25.8■■□□□ 1.72
SCAMP5-207ENST00000564491 BIVM-ERCC5R4GMW8 1640 aa25.77■■□□□ 1.72
SCAMP5-207ENST00000564491 MAGI1Q96QZ7 1491 aaPredicted RBP25.77■■□□□ 1.72
SCAMP5-207ENST00000564491 GAPVD1Q14C86 1478 aa25.75■■□□□ 1.71
SCAMP5-207ENST00000564491 FBLN2P98095 1184 aa25.75■■□□□ 1.71
SCAMP5-207ENST00000564491 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
SCAMP5-207ENST00000564491 SNAPC4Q5SXM2 1469 aa25.7■■□□□ 1.7
SCAMP5-207ENST00000564491 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
SCAMP5-207ENST00000564491 SYNJ2O15056 1496 aa25.65■■□□□ 1.7
SCAMP5-207ENST00000564491 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
SCAMP5-207ENST00000564491 CHD1O14646 1710 aa25.6■■□□□ 1.69
SCAMP5-207ENST00000564491 PBRM1Q86U86 1689 aa25.57■■□□□ 1.68
SCAMP5-207ENST00000564491 ERICH3Q5RHP9 1530 aa25.53■■□□□ 1.68
SCAMP5-207ENST00000564491 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
SCAMP5-207ENST00000564491 FHAD1B1AJZ9 1412 aa25.49■■□□□ 1.67
SCAMP5-207ENST00000564491 ARHGEF11O15085 1522 aa25.48■■□□□ 1.67
SCAMP5-207ENST00000564491 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.67
SCAMP5-207ENST00000564491 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.67
SCAMP5-207ENST00000564491 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.67
SCAMP5-207ENST00000564491 KIF27Q86VH2 1401 aa25.44■■□□□ 1.66
SCAMP5-207ENST00000564491 CLASP1Q7Z460 1538 aa25.42■■□□□ 1.66
SCAMP5-207ENST00000564491 GRIN2AQ12879 1464 aa25.41■■□□□ 1.66
SCAMP5-207ENST00000564491 ADAMTS12P58397 1594 aa25.4■■□□□ 1.66
SCAMP5-207ENST00000564491 NUP160Q12769 1436 aa25.32■■□□□ 1.64
SCAMP5-207ENST00000564491 CYB5RLQ6IPT4 315 aa25.32■■□□□ 1.64
SCAMP5-207ENST00000564491 IGF1RP08069 1367 aa25.29■■□□□ 1.64
SCAMP5-207ENST00000564491 ARAP1Q96P48 1450 aa25.23■■□□□ 1.63
SCAMP5-207ENST00000564491 CUL7Q14999 1698 aa25.23■■□□□ 1.63
SCAMP5-207ENST00000564491 CEP170Q5SW79 1584 aa25.2■■□□□ 1.62
SCAMP5-207ENST00000564491 CARMIL1Q5VZK9 1371 aa25.17■■□□□ 1.62
SCAMP5-207ENST00000564491 JPH4Q96JJ6 628 aa25.13■■□□□ 1.61
SCAMP5-207ENST00000564491 SHROOM2Q13796 1616 aa25.09■■□□□ 1.61
SCAMP5-207ENST00000564491 KIAA0586Q9BVV6 1533 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms