RNA–Protein interactions for RNA: ENST00000564477.1

GCSH-204, Transcript of glycine cleavage system protein H, humanhuman

TSL 5

Gene GCSH, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-204ENST00000564477 NISCHQ9Y2I1 1504 aa46.67■■■■■ 5.06
GCSH-204ENST00000564477 ABCC9O60706 1549 aa41.82■■■■■ 4.29
GCSH-204ENST00000564477 CCDC180Q9P1Z9 1646 aa41.64■■■■■ 4.26
GCSH-204ENST00000564477 RB1CC1Q8TDY2 1594 aa39.76■■■■□ 3.95
GCSH-204ENST00000564477 DCAF8L2P0C7V8 631 aa39.72■■■■□ 3.95
GCSH-204ENST00000564477 NACADO15069 1562 aa39.51■■■■□ 3.92
GCSH-204ENST00000564477 DNAJC5BQ9UF47 199 aa39.34■■■■□ 3.89
GCSH-204ENST00000564477 PABPN1Q86U42 306 aaKnown RBP eCLIP39.11■■■■□ 3.85
GCSH-204ENST00000564477 MYO15BQ96JP2 1530 aa38.99■■■■□ 3.83
GCSH-204ENST00000564477 ZCCHC6Q5VYS8 1495 aaKnown RBP38.63■■■■□ 3.77
GCSH-204ENST00000564477 UNC13AQ9UPW8 1703 aa38.58■■■■□ 3.77
GCSH-204ENST00000564477 DCAF1Q9Y4B6 1507 aa38.51■■■■□ 3.76
GCSH-204ENST00000564477 BICRAQ9NZM4 1560 aa38.51■■■■□ 3.76
GCSH-204ENST00000564477 SHROOM4Q9ULL8 1493 aa38.06■■■■□ 3.68
GCSH-204ENST00000564477 SCRIBQ14160 1630 aa38.05■■■■□ 3.68
GCSH-204ENST00000564477 CECR2Q9BXF3 1484 aa37.67■■■■□ 3.62
GCSH-204ENST00000564477 CC2D2AQ9P2K1 1620 aa37.67■■■■□ 3.62
GCSH-204ENST00000564477 EIF4G1Q04637 1599 aaKnown RBP37.61■■■■□ 3.61
GCSH-204ENST00000564477 NCAPD3P42695 1498 aa36.56■■■■□ 3.44
GCSH-204ENST00000564477 DNAJC5Q9H3Z4 198 aa36.5■■■■□ 3.43
GCSH-204ENST00000564477 ATAD2BQ9ULI0 1458 aa36.43■■■■□ 3.42
GCSH-204ENST00000564477 SMARCA2P51531 1590 aa36.3■■■■□ 3.4
GCSH-204ENST00000564477 SMARCA4P51532 1647 aa36.29■■■■□ 3.4
GCSH-204ENST00000564477 BAZ1AQ9NRL2 1556 aaPredicted RBP36.2■■■■□ 3.39
GCSH-204ENST00000564477 HMGXB3Q12766 1538 aa36.16■■■■□ 3.38
GCSH-204ENST00000564477 ERCC6Q03468 1493 aa36.15■■■■□ 3.38
GCSH-204ENST00000564477 BAZ1BQ9UIG0 1483 aaKnown RBP36.09■■■■□ 3.37
GCSH-204ENST00000564477 CUX2O14529 1486 aa35.99■■■■□ 3.35
GCSH-204ENST00000564477 MROH2BQ7Z745 1585 aa35.95■■■■□ 3.35
GCSH-204ENST00000564477 PEG3Q9GZU2 1588 aa35.93■■■■□ 3.34
GCSH-204ENST00000564477 NESP48681 1621 aa35.9■■■■□ 3.34
GCSH-204ENST00000564477 LAMC3Q9Y6N6 1575 aa35.62■■■■□ 3.29
GCSH-204ENST00000564477 PDS5BQ9NTI5 1447 aa35.58■■■■□ 3.29
GCSH-204ENST00000564477 CADPSQ9ULU8 1353 aa35.52■■■■□ 3.28
GCSH-204ENST00000564477 WIZO95785 1651 aa35.44■■■■□ 3.26
GCSH-204ENST00000564477 THOC2Q8NI27 1593 aaKnown RBP35.36■■■■□ 3.25
GCSH-204ENST00000564477 RSF1Q96T23 1441 aaPredicted RBP35.32■■■■□ 3.24
GCSH-204ENST00000564477 KIF21AQ7Z4S6 1674 aa35.24■■■■□ 3.23
GCSH-204ENST00000564477 MRC2Q9UBG0 1479 aa35.16■■■■□ 3.22
GCSH-204ENST00000564477 CFTRP13569 1480 aa35.05■■■■□ 3.2
GCSH-204ENST00000564477 CEP164Q9UPV0 1460 aa35.05■■■■□ 3.2
GCSH-204ENST00000564477 TOP2AP11388 1531 aaKnown RBP35.04■■■■□ 3.2
GCSH-204ENST00000564477 FANCD2Q9BXW9 1451 aa35.03■■■■□ 3.2
GCSH-204ENST00000564477 WDR62O43379 1518 aa34.99■■■■□ 3.19
GCSH-204ENST00000564477 CCDC88BA6NC98 1476 aa34.75■■■■□ 3.15
GCSH-204ENST00000564477 URB2Q14146 1524 aaKnown RBP34.69■■■■□ 3.14
GCSH-204ENST00000564477 TRIM41Q8WV44 630 aa34.66■■■■□ 3.14
GCSH-204ENST00000564477 OSCARQ8IYS5 282 aa34.6■■■■□ 3.13
GCSH-204ENST00000564477 IFT140Q96RY7 1462 aa34.38■■■■□ 3.09
GCSH-204ENST00000564477 ABCC8Q09428 1581 aa34.36■■■■□ 3.09
GCSH-204ENST00000564477 PRDM2Q13029 1718 aa34.35■■■■□ 3.09
GCSH-204ENST00000564477 TOPBP1Q92547 1522 aa34.35■■■■□ 3.09
GCSH-204ENST00000564477 ZNF608Q9ULD9 1512 aaPredicted RBP34.28■■■■□ 3.08
GCSH-204ENST00000564477 DNMBPQ6XZF7 1577 aa34.17■■■■□ 3.06
GCSH-204ENST00000564477 AQRO60306 1485 aaKnown RBP eCLIP34.06■■■■□ 3.049e-9■■■■■ 35.9
GCSH-204ENST00000564477 SUPT5HO00267 1087 aaKnown RBP34.03■■■■□ 3.04
GCSH-204ENST00000564477 FBLN2P98095 1184 aa34■■■■□ 3.03
GCSH-204ENST00000564477 POLA1P09884 1462 aaPredicted RBP34■■■■□ 3.03
GCSH-204ENST00000564477 SOGA1O94964 1423 aa33.98■■■■□ 3.03
GCSH-204ENST00000564477 EIF4G3O43432 1585 aaKnown RBP33.95■■■■□ 3.03
GCSH-204ENST00000564477 RAD54L2Q9Y4B4 1467 aa33.93■■■■□ 3.02
GCSH-204ENST00000564477 TARBP1Q13395 1621 aaKnown RBP33.93■■■■□ 3.02
GCSH-204ENST00000564477 TDRD9Q8NDG6 1382 aaKnown RBP33.91■■■■□ 3.02
GCSH-204ENST00000564477 RIMBP3CA6NJZ7 1639 aa33.83■■■■□ 3.01
GCSH-204ENST00000564477 RIMBP3BA6NNM3 1639 aa33.83■■■■□ 3.01
GCSH-204ENST00000564477 RIMBP3Q9UFD9 1639 aa33.83■■■■□ 3.01
GCSH-204ENST00000564477 FGD5Q6ZNL6 1462 aa33.81■■■■□ 3
GCSH-204ENST00000564477 CYB5RLQ6IPT4 315 aa33.78■■■■□ 3
GCSH-204ENST00000564477 ARHGEF11O15085 1522 aa33.77■■■■□ 3
GCSH-204ENST00000564477 CHMP7Q8WUX9 453 aaPredicted RBP33.75■■■□□ 2.99
GCSH-204ENST00000564477 CUX1P39880 1505 aa33.74■■■□□ 2.99
GCSH-204ENST00000564477 SNAPC4Q5SXM2 1469 aa33.63■■■□□ 2.97
GCSH-204ENST00000564477 CHD1O14646 1710 aa33.62■■■□□ 2.97
GCSH-204ENST00000564477 GRIN2BQ13224 1484 aa33.61■■■□□ 2.97
GCSH-204ENST00000564477 WDR97A6NE52 1622 aa33.6■■■□□ 2.97
GCSH-204ENST00000564477 MAGI1Q96QZ7 1491 aaPredicted RBP33.56■■■□□ 2.96
GCSH-204ENST00000564477 GAPVD1Q14C86 1478 aa33.5■■■□□ 2.95
GCSH-204ENST00000564477 SYNJ2O15056 1496 aa33.46■■■□□ 2.95
GCSH-204ENST00000564477 ARAP1Q96P48 1450 aa33.44■■■□□ 2.94
GCSH-204ENST00000564477 ABCA10Q8WWZ4 1543 aa33.43■■■□□ 2.94
GCSH-204ENST00000564477 WRNQ14191 1432 aaPredicted RBP eCLIP33.42■■■□□ 2.94
GCSH-204ENST00000564477 TRHP20396 242 aaPredicted RBP33.41■■■□□ 2.94
GCSH-204ENST00000564477 SYNJ1O43426 1573 aa33.39■■■□□ 2.94
GCSH-204ENST00000564477 CLASP1Q7Z460 1538 aa33.33■■■□□ 2.93
GCSH-204ENST00000564477 ABCA5Q8WWZ7 1642 aa33.23■■■□□ 2.91
GCSH-204ENST00000564477 PBRM1Q86U86 1689 aa33.22■■■□□ 2.91
GCSH-204ENST00000564477 TOP2BQ02880 1626 aa33.19■■■□□ 2.9
GCSH-204ENST00000564477 GRIN2AQ12879 1464 aa33.12■■■□□ 2.89
GCSH-204ENST00000564477 BIVM-ERCC5R4GMW8 1640 aa33.12■■■□□ 2.89
GCSH-204ENST00000564477 FHAD1B1AJZ9 1412 aa33.11■■■□□ 2.89
GCSH-204ENST00000564477 NUP160Q12769 1436 aa33.02■■■□□ 2.88
GCSH-204ENST00000564477 ADAMTS12P58397 1594 aa33■■■□□ 2.87
GCSH-204ENST00000564477 ERICH3Q5RHP9 1530 aa32.99■■■□□ 2.87
GCSH-204ENST00000564477 CEP170Q5SW79 1584 aa32.92■■■□□ 2.86
GCSH-204ENST00000564477 JPH4Q96JJ6 628 aa32.9■■■□□ 2.86
GCSH-204ENST00000564477 ERCC6L2Q5T890 1561 aa32.84■■■□□ 2.85
GCSH-204ENST00000564477 PRG4Q92954 1404 aaPredicted RBP32.78■■■□□ 2.84
GCSH-204ENST00000564477 IGF1RP08069 1367 aa32.75■■■□□ 2.83
GCSH-204ENST00000564477 KIF27Q86VH2 1401 aa32.73■■■□□ 2.83
GCSH-204ENST00000564477 SHROOM2Q13796 1616 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms