RNA–Protein interactions for RNA: ENST00000564404.5

TRAPPC2L-207, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-207ENST00000564404 NISCHQ9Y2I1 1504 aa29.88■■■□□ 2.37
TRAPPC2L-207ENST00000564404 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
TRAPPC2L-207ENST00000564404 ABCC9O60706 1549 aa26.43■■□□□ 1.82
TRAPPC2L-207ENST00000564404 RB1CC1Q8TDY2 1594 aa25.31■■□□□ 1.64
TRAPPC2L-207ENST00000564404 NACADO15069 1562 aa25.17■■□□□ 1.62
TRAPPC2L-207ENST00000564404 DCAF8L2P0C7V8 631 aa25.13■■□□□ 1.61
TRAPPC2L-207ENST00000564404 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
TRAPPC2L-207ENST00000564404 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
TRAPPC2L-207ENST00000564404 UNC13AQ9UPW8 1703 aa24.86■■□□□ 1.57
TRAPPC2L-207ENST00000564404 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.57
TRAPPC2L-207ENST00000564404 DCAF1Q9Y4B6 1507 aa24.67■■□□□ 1.54
TRAPPC2L-207ENST00000564404 PABPN1Q86U42 306 aaKnown RBP eCLIP24.62■■□□□ 1.53
TRAPPC2L-207ENST00000564404 BICRAQ9NZM4 1560 aa24.53■■□□□ 1.52
TRAPPC2L-207ENST00000564404 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
TRAPPC2L-207ENST00000564404 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
TRAPPC2L-207ENST00000564404 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
TRAPPC2L-207ENST00000564404 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
TRAPPC2L-207ENST00000564404 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
TRAPPC2L-207ENST00000564404 DNAJC5Q9H3Z4 198 aa23.35■■□□□ 1.33
TRAPPC2L-207ENST00000564404 SMARCA4P51532 1647 aa23.3■■□□□ 1.32
TRAPPC2L-207ENST00000564404 BAZ1AQ9NRL2 1556 aaPredicted RBP23.2■■□□□ 1.3
TRAPPC2L-207ENST00000564404 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
TRAPPC2L-207ENST00000564404 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
TRAPPC2L-207ENST00000564404 SMARCA2P51531 1590 aa23.17■■□□□ 1.3
TRAPPC2L-207ENST00000564404 HMGXB3Q12766 1538 aa23.09■■□□□ 1.29
TRAPPC2L-207ENST00000564404 MROH2BQ7Z745 1585 aa23.05■■□□□ 1.28
TRAPPC2L-207ENST00000564404 PEG3Q9GZU2 1588 aa23.01■■□□□ 1.27
TRAPPC2L-207ENST00000564404 BAZ1BQ9UIG0 1483 aaKnown RBP23.01■■□□□ 1.27
TRAPPC2L-207ENST00000564404 WIZO95785 1651 aa22.85■■□□□ 1.25
TRAPPC2L-207ENST00000564404 ERCC6Q03468 1493 aa22.81■■□□□ 1.24
TRAPPC2L-207ENST00000564404 NESP48681 1621 aa22.79■■□□□ 1.24
TRAPPC2L-207ENST00000564404 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
TRAPPC2L-207ENST00000564404 CUX2O14529 1486 aa22.69■■□□□ 1.22
TRAPPC2L-207ENST00000564404 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.21
TRAPPC2L-207ENST00000564404 KIF21AQ7Z4S6 1674 aa22.61■■□□□ 1.21
TRAPPC2L-207ENST00000564404 TOP2AP11388 1531 aaKnown RBP22.53■■□□□ 1.2
TRAPPC2L-207ENST00000564404 THOC2Q8NI27 1593 aaKnown RBP22.53■■□□□ 1.2
TRAPPC2L-207ENST00000564404 PDS5BQ9NTI5 1447 aa22.5■■□□□ 1.19
TRAPPC2L-207ENST00000564404 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
TRAPPC2L-207ENST00000564404 PRDM2Q13029 1718 aa22.31■■□□□ 1.16
TRAPPC2L-207ENST00000564404 CFTRP13569 1480 aa22.31■■□□□ 1.16
TRAPPC2L-207ENST00000564404 MRC2Q9UBG0 1479 aa22.31■■□□□ 1.16
TRAPPC2L-207ENST00000564404 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
TRAPPC2L-207ENST00000564404 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
TRAPPC2L-207ENST00000564404 WDR62O43379 1518 aa22.25■■□□□ 1.15
TRAPPC2L-207ENST00000564404 CCDC88BA6NC98 1476 aa22.24■■□□□ 1.15
TRAPPC2L-207ENST00000564404 URB2Q14146 1524 aaKnown RBP22.08■■□□□ 1.13
TRAPPC2L-207ENST00000564404 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
TRAPPC2L-207ENST00000564404 SUPT5HO00267 1087 aaKnown RBP21.92■■□□□ 1.1
TRAPPC2L-207ENST00000564404 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
TRAPPC2L-207ENST00000564404 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
TRAPPC2L-207ENST00000564404 ABCC8Q09428 1581 aa21.86■■□□□ 1.09
TRAPPC2L-207ENST00000564404 IFT140Q96RY7 1462 aa21.81■■□□□ 1.08
TRAPPC2L-207ENST00000564404 ZNF608Q9ULD9 1512 aaPredicted RBP21.76■■□□□ 1.07
TRAPPC2L-207ENST00000564404 EIF4G3O43432 1585 aaKnown RBP21.72■■□□□ 1.07
TRAPPC2L-207ENST00000564404 TARBP1Q13395 1621 aaKnown RBP21.71■■□□□ 1.07
TRAPPC2L-207ENST00000564404 POLA1P09884 1462 aaPredicted RBP21.7■■□□□ 1.06
TRAPPC2L-207ENST00000564404 CUX1P39880 1505 aa21.65■■□□□ 1.06
TRAPPC2L-207ENST00000564404 FGD5Q6ZNL6 1462 aa21.61■■□□□ 1.05
TRAPPC2L-207ENST00000564404 RAD54L2Q9Y4B4 1467 aa21.61■■□□□ 1.05
TRAPPC2L-207ENST00000564404 OSCARQ8IYS5 282 aa21.61■■□□□ 1.05
TRAPPC2L-207ENST00000564404 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.057e-7■■■□□ 15.5
TRAPPC2L-207ENST00000564404 SOGA1O94964 1423 aa21.58■■□□□ 1.05
TRAPPC2L-207ENST00000564404 CHD1O14646 1710 aa21.56■■□□□ 1.04
TRAPPC2L-207ENST00000564404 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
TRAPPC2L-207ENST00000564404 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
TRAPPC2L-207ENST00000564404 PBRM1Q86U86 1689 aa21.44■■□□□ 1.02
TRAPPC2L-207ENST00000564404 FBLN2P98095 1184 aa21.43■■□□□ 1.02
TRAPPC2L-207ENST00000564404 BIVM-ERCC5R4GMW8 1640 aa21.43■■□□□ 1.02
TRAPPC2L-207ENST00000564404 SNAPC4Q5SXM2 1469 aa21.41■■□□□ 1.02
TRAPPC2L-207ENST00000564404 RIMBP3CA6NJZ7 1639 aa21.4■■□□□ 1.02
TRAPPC2L-207ENST00000564404 RIMBP3BA6NNM3 1639 aa21.4■■□□□ 1.02
TRAPPC2L-207ENST00000564404 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
TRAPPC2L-207ENST00000564404 RIMBP3Q9UFD9 1639 aa21.4■■□□□ 1.02
TRAPPC2L-207ENST00000564404 SYNJ1O43426 1573 aa21.39■■□□□ 1.01
TRAPPC2L-207ENST00000564404 WRNQ14191 1432 aaPredicted RBP eCLIP21.38■■□□□ 1.01
TRAPPC2L-207ENST00000564404 GRIN2BQ13224 1484 aa21.37■■□□□ 1.01
TRAPPC2L-207ENST00000564404 ABCA10Q8WWZ4 1543 aa21.36■■□□□ 1.01
TRAPPC2L-207ENST00000564404 ABCA5Q8WWZ7 1642 aa21.36■■□□□ 1.01
TRAPPC2L-207ENST00000564404 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
TRAPPC2L-207ENST00000564404 MAGI1Q96QZ7 1491 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC2L-207ENST00000564404 ARHGEF11O15085 1522 aa21.32■■□□□ 1
TRAPPC2L-207ENST00000564404 CHMP7Q8WUX9 453 aaPredicted RBP21.28■■□□□ 1
TRAPPC2L-207ENST00000564404 SYNJ2O15056 1496 aa21.26■□□□□ 0.99
TRAPPC2L-207ENST00000564404 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
TRAPPC2L-207ENST00000564404 ADAMTS12P58397 1594 aa21.18■□□□□ 0.98
TRAPPC2L-207ENST00000564404 CYB5RLQ6IPT4 315 aa21.12■□□□□ 0.97
TRAPPC2L-207ENST00000564404 ERICH3Q5RHP9 1530 aa21.12■□□□□ 0.97
TRAPPC2L-207ENST00000564404 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
TRAPPC2L-207ENST00000564404 GRIN2AQ12879 1464 aa21.11■□□□□ 0.97
TRAPPC2L-207ENST00000564404 FHAD1B1AJZ9 1412 aa21.06■□□□□ 0.96
TRAPPC2L-207ENST00000564404 CEP170Q5SW79 1584 aa21.05■□□□□ 0.96
TRAPPC2L-207ENST00000564404 TRHP20396 242 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC2L-207ENST00000564404 NUP160Q12769 1436 aa20.99■□□□□ 0.95
TRAPPC2L-207ENST00000564404 KIF27Q86VH2 1401 aa20.95■□□□□ 0.94
TRAPPC2L-207ENST00000564404 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
TRAPPC2L-207ENST00000564404 SHROOM2Q13796 1616 aa20.93■□□□□ 0.94
TRAPPC2L-207ENST00000564404 CUL7Q14999 1698 aa20.93■□□□□ 0.94
TRAPPC2L-207ENST00000564404 RUSC2Q8N2Y8 1516 aa20.87■□□□□ 0.93
TRAPPC2L-207ENST00000564404 IGF1RP08069 1367 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms