RNA–Protein interactions for RNA: ENST00000564295.1

MT1F-202, Transcript of metallothionein 1F, humanhuman

Gene MT1F, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT1F-202ENST00000564295 NISCHQ9Y2I1 1504 aa42.19■■■■■ 4.34
MT1F-202ENST00000564295 CCDC180Q9P1Z9 1646 aa36.97■■■■□ 3.51
MT1F-202ENST00000564295 ZCCHC6Q5VYS8 1495 aaKnown RBP35.36■■■■□ 3.25
MT1F-202ENST00000564295 ABCC9O60706 1549 aa35.27■■■■□ 3.24
MT1F-202ENST00000564295 DCAF1Q9Y4B6 1507 aa34.93■■■■□ 3.18
MT1F-202ENST00000564295 DCAF8L2P0C7V8 631 aa34.86■■■■□ 3.17
MT1F-202ENST00000564295 MYO15BQ96JP2 1530 aa34.7■■■■□ 3.15
MT1F-202ENST00000564295 NACADO15069 1562 aa34.56■■■■□ 3.12
MT1F-202ENST00000564295 RB1CC1Q8TDY2 1594 aa34.32■■■■□ 3.08
MT1F-202ENST00000564295 SHROOM4Q9ULL8 1493 aa34■■■■□ 3.03
MT1F-202ENST00000564295 SCRIBQ14160 1630 aa33.86■■■■□ 3.01
MT1F-202ENST00000564295 UNC13AQ9UPW8 1703 aa33.56■■■□□ 2.96
MT1F-202ENST00000564295 BICRAQ9NZM4 1560 aa33.31■■■□□ 2.92
MT1F-202ENST00000564295 PABPN1Q86U42 306 aaKnown RBP eCLIP33.18■■■□□ 2.9
MT1F-202ENST00000564295 CECR2Q9BXF3 1484 aa32.79■■■□□ 2.84
MT1F-202ENST00000564295 BAZ1AQ9NRL2 1556 aaPredicted RBP32.59■■■□□ 2.81
MT1F-202ENST00000564295 RSF1Q96T23 1441 aaPredicted RBP32.57■■■□□ 2.8
MT1F-202ENST00000564295 MROH2BQ7Z745 1585 aa32.55■■■□□ 2.8
MT1F-202ENST00000564295 SUPT5HO00267 1087 aaKnown RBP32.53■■■□□ 2.8
MT1F-202ENST00000564295 SMARCA4P51532 1647 aa32.49■■■□□ 2.79
MT1F-202ENST00000564295 EIF4G1Q04637 1599 aaKnown RBP32.32■■■□□ 2.76
MT1F-202ENST00000564295 WIZO95785 1651 aa32.23■■■□□ 2.75
MT1F-202ENST00000564295 PEG3Q9GZU2 1588 aa32.16■■■□□ 2.74
MT1F-202ENST00000564295 ATAD2BQ9ULI0 1458 aa32.08■■■□□ 2.73
MT1F-202ENST00000564295 SMARCA2P51531 1590 aa32.05■■■□□ 2.72
MT1F-202ENST00000564295 TOP2AP11388 1531 aaKnown RBP31.93■■■□□ 2.7
MT1F-202ENST00000564295 CC2D2AQ9P2K1 1620 aa31.92■■■□□ 2.7
MT1F-202ENST00000564295 NCAPD3P42695 1498 aa31.92■■■□□ 2.7
MT1F-202ENST00000564295 BAZ1BQ9UIG0 1483 aaKnown RBP31.85■■■□□ 2.69
MT1F-202ENST00000564295 HMGXB3Q12766 1538 aa31.81■■■□□ 2.68
MT1F-202ENST00000564295 DNAJC5BQ9UF47 199 aa31.74■■■□□ 2.67
MT1F-202ENST00000564295 CCDC88BA6NC98 1476 aa31.6■■■□□ 2.65
MT1F-202ENST00000564295 CFTRP13569 1480 aa31.08■■■□□ 2.57
MT1F-202ENST00000564295 CADPSQ9ULU8 1353 aa31.05■■■□□ 2.56
MT1F-202ENST00000564295 CHIC1Q5VXU3 224 aa31■■■□□ 2.55
MT1F-202ENST00000564295 LAMC3Q9Y6N6 1575 aa30.85■■■□□ 2.53
MT1F-202ENST00000564295 NESP48681 1621 aa30.84■■■□□ 2.53
MT1F-202ENST00000564295 PRDM2Q13029 1718 aa30.81■■■□□ 2.52
MT1F-202ENST00000564295 ABCC8Q09428 1581 aa30.74■■■□□ 2.51
MT1F-202ENST00000564295 TRIM41Q8WV44 630 aa30.66■■■□□ 2.5
MT1F-202ENST00000564295 FANCD2Q9BXW9 1451 aa30.66■■■□□ 2.5
MT1F-202ENST00000564295 WRNQ14191 1432 aaPredicted RBP eCLIP30.65■■■□□ 2.5
MT1F-202ENST00000564295 PDS5BQ9NTI5 1447 aa30.63■■■□□ 2.49
MT1F-202ENST00000564295 SYNJ1O43426 1573 aa30.51■■■□□ 2.48
MT1F-202ENST00000564295 CEP164Q9UPV0 1460 aa30.51■■■□□ 2.47
MT1F-202ENST00000564295 CUX1P39880 1505 aa30.46■■■□□ 2.47
MT1F-202ENST00000564295 TOP2BQ02880 1626 aa30.45■■■□□ 2.47
MT1F-202ENST00000564295 KIF21AQ7Z4S6 1674 aa30.45■■■□□ 2.46
MT1F-202ENST00000564295 BIVM-ERCC5R4GMW8 1640 aa30.42■■■□□ 2.46
MT1F-202ENST00000564295 DNMBPQ6XZF7 1577 aa30.32■■■□□ 2.44
MT1F-202ENST00000564295 URB2Q14146 1524 aaKnown RBP30.31■■■□□ 2.44
MT1F-202ENST00000564295 TOPBP1Q92547 1522 aa30.29■■■□□ 2.44
MT1F-202ENST00000564295 ERCC6Q03468 1493 aa30.27■■■□□ 2.44
MT1F-202ENST00000564295 MRC2Q9UBG0 1479 aa30.25■■■□□ 2.43
MT1F-202ENST00000564295 FGD5Q6ZNL6 1462 aa30.19■■■□□ 2.42
MT1F-202ENST00000564295 WDR62O43379 1518 aa30.12■■■□□ 2.41
MT1F-202ENST00000564295 POLA1P09884 1462 aaPredicted RBP30.12■■■□□ 2.41
MT1F-202ENST00000564295 SOGA1O94964 1423 aa30.12■■■□□ 2.41
MT1F-202ENST00000564295 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
MT1F-202ENST00000564295 RUSC2Q8N2Y8 1516 aa30.03■■■□□ 2.4
MT1F-202ENST00000564295 FAM9AQ8IZU1 332 aaPredicted RBP30.03■■■□□ 2.4
MT1F-202ENST00000564295 EEA1Q15075 1411 aa30.02■■■□□ 2.4
MT1F-202ENST00000564295 RAD54L2Q9Y4B4 1467 aa30■■■□□ 2.39
MT1F-202ENST00000564295 ABCA10Q8WWZ4 1543 aa29.94■■■□□ 2.38
MT1F-202ENST00000564295 CUX2O14529 1486 aa29.93■■■□□ 2.38
MT1F-202ENST00000564295 KIF27Q86VH2 1401 aa29.91■■■□□ 2.38
MT1F-202ENST00000564295 CSRNP3Q8WYN3 585 aa29.88■■■□□ 2.37
MT1F-202ENST00000564295 TARBP1Q13395 1621 aaKnown RBP29.88■■■□□ 2.37
MT1F-202ENST00000564295 WDR97A6NE52 1622 aa29.86■■■□□ 2.37
MT1F-202ENST00000564295 IFT140Q96RY7 1462 aa29.83■■■□□ 2.37
MT1F-202ENST00000564295 LOC105371045A0A1W2PR82 267 aa29.76■■■□□ 2.35
MT1F-202ENST00000564295 TDRD9Q8NDG6 1382 aaKnown RBP29.74■■■□□ 2.35
MT1F-202ENST00000564295 IGF1RP08069 1367 aa29.72■■■□□ 2.35
MT1F-202ENST00000564295 ABCA5Q8WWZ7 1642 aa29.71■■■□□ 2.35
MT1F-202ENST00000564295 GAPVD1Q14C86 1478 aa29.68■■■□□ 2.34
MT1F-202ENST00000564295 ZNF608Q9ULD9 1512 aaPredicted RBP29.65■■■□□ 2.34
MT1F-202ENST00000564295 PRXQ9BXM0 1461 aa29.63■■■□□ 2.33
MT1F-202ENST00000564295 AQRO60306 1485 aaKnown RBP eCLIP29.62■■■□□ 2.33
MT1F-202ENST00000564295 KIF21BO75037 1637 aa29.62■■■□□ 2.33
MT1F-202ENST00000564295 ERICH3Q5RHP9 1530 aa29.58■■■□□ 2.33
MT1F-202ENST00000564295 EHMT2Q96KQ7 1210 aa29.56■■■□□ 2.32
MT1F-202ENST00000564295 GOLGA3Q08378 1498 aa29.55■■■□□ 2.32
MT1F-202ENST00000564295 CARMIL1Q5VZK9 1371 aa29.55■■■□□ 2.32
MT1F-202ENST00000564295 RAPGEF2Q9Y4G8 1499 aa29.52■■■□□ 2.32
MT1F-202ENST00000564295 EIF4G3O43432 1585 aaKnown RBP29.52■■■□□ 2.32
MT1F-202ENST00000564295 GRIN2BQ13224 1484 aa29.52■■■□□ 2.32
MT1F-202ENST00000564295 PBRM1Q86U86 1689 aa29.49■■■□□ 2.31
MT1F-202ENST00000564295 CUL7Q14999 1698 aa29.49■■■□□ 2.31
MT1F-202ENST00000564295 TNIKQ9UKE5 1360 aa29.41■■■□□ 2.3
MT1F-202ENST00000564295 UBTFP17480 764 aaKnown RBP29.4■■■□□ 2.3
MT1F-202ENST00000564295 FHAD1B1AJZ9 1412 aa29.36■■■□□ 2.29
MT1F-202ENST00000564295 SNAPC4Q5SXM2 1469 aa29.34■■■□□ 2.29
MT1F-202ENST00000564295 ADAMTS12P58397 1594 aa29.34■■■□□ 2.29
MT1F-202ENST00000564295 MAGI1Q96QZ7 1491 aaPredicted RBP29.32■■■□□ 2.28
MT1F-202ENST00000564295 SYNJ2O15056 1496 aa29.21■■■□□ 2.27
MT1F-202ENST00000564295 CEP162Q5TB80 1403 aa29.18■■■□□ 2.26
MT1F-202ENST00000564295 GRIN2AQ12879 1464 aa29.14■■■□□ 2.26
MT1F-202ENST00000564295 CHMP7Q8WUX9 453 aaPredicted RBP29.13■■■□□ 2.25
MT1F-202ENST00000564295 CTTNBP2Q8WZ74 1663 aa29.05■■■□□ 2.24
MT1F-202ENST00000564295 CLIP1P30622 1438 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms