RNA–Protein interactions for RNA: ENST00000564286.1

CFDP1-203, Transcript of craniofacial development protein 1, humanhuman

TSL 5

Gene CFDP1, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-203ENST00000564286 AEBP2Q6ZN18 517 aaPredicted RBP28.55■■■□□ 2.16
CFDP1-203ENST00000564286 CHIC1Q5VXU3 224 aa27.3■■□□□ 1.96
CFDP1-203ENST00000564286 NISCHQ9Y2I1 1504 aa26.85■■□□□ 1.89
CFDP1-203ENST00000564286 ABCC9O60706 1549 aa24.43■■□□□ 1.5
CFDP1-203ENST00000564286 CCDC180Q9P1Z9 1646 aa24.13■■□□□ 1.45
CFDP1-203ENST00000564286 SENP3Q9H4L4 574 aaPredicted RBP24.1■■□□□ 1.45
CFDP1-203ENST00000564286 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
CFDP1-203ENST00000564286 RB1CC1Q8TDY2 1594 aa23.15■■□□□ 1.3
CFDP1-203ENST00000564286 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
CFDP1-203ENST00000564286 DCAF8L2P0C7V8 631 aa22.94■■□□□ 1.26
CFDP1-203ENST00000564286 NACADO15069 1562 aa22.93■■□□□ 1.26
CFDP1-203ENST00000564286 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
CFDP1-203ENST00000564286 FOXD1Q16676 465 aa22.55■■□□□ 1.2
CFDP1-203ENST00000564286 MYO15BQ96JP2 1530 aa22.54■■□□□ 1.2
CFDP1-203ENST00000564286 UNC13AQ9UPW8 1703 aa22.45■■□□□ 1.19
CFDP1-203ENST00000564286 BICRAQ9NZM4 1560 aa22.39■■□□□ 1.18
CFDP1-203ENST00000564286 ZCCHC6Q5VYS8 1495 aaKnown RBP22.18■■□□□ 1.14
CFDP1-203ENST00000564286 SHROOM4Q9ULL8 1493 aa22.16■■□□□ 1.14
CFDP1-203ENST00000564286 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
CFDP1-203ENST00000564286 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
CFDP1-203ENST00000564286 SCRIBQ14160 1630 aa22.02■■□□□ 1.11
CFDP1-203ENST00000564286 CC2D2AQ9P2K1 1620 aa22.01■■□□□ 1.11
CFDP1-203ENST00000564286 EIF4G1Q04637 1599 aaKnown RBP21.91■■□□□ 1.1
CFDP1-203ENST00000564286 PLPPR3Q6T4P5 718 aa21.87■■□□□ 1.09
CFDP1-203ENST00000564286 DNAJC5Q9H3Z4 198 aa21.43■■□□□ 1.02
CFDP1-203ENST00000564286 PPP6R1Q9UPN7 881 aa21.4■■□□□ 1.02
CFDP1-203ENST00000564286 ADRA2BP18089 450 aa21.28■■□□□ 1
CFDP1-203ENST00000564286 NCAPD3P42695 1498 aa21.19■□□□□ 0.98
CFDP1-203ENST00000564286 ERCC6Q03468 1493 aa21.18■□□□□ 0.98
CFDP1-203ENST00000564286 CUX2O14529 1486 aa21.16■□□□□ 0.98
CFDP1-203ENST00000564286 ATAD2BQ9ULI0 1458 aa21.08■□□□□ 0.97
CFDP1-203ENST00000564286 PIAS4Q8N2W9 510 aaPredicted RBP21.04■□□□□ 0.96
CFDP1-203ENST00000564286 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
CFDP1-203ENST00000564286 HMGXB3Q12766 1538 aa20.98■□□□□ 0.95
CFDP1-203ENST00000564286 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
CFDP1-203ENST00000564286 BAZ1BQ9UIG0 1483 aaKnown RBP20.9■□□□□ 0.94
CFDP1-203ENST00000564286 NESP48681 1621 aa20.89■□□□□ 0.93
CFDP1-203ENST00000564286 BAZ1AQ9NRL2 1556 aaPredicted RBP20.88■□□□□ 0.93
CFDP1-203ENST00000564286 MSH5O43196 834 aa20.84■□□□□ 0.93
CFDP1-203ENST00000564286 PEG3Q9GZU2 1588 aa20.75■□□□□ 0.91
CFDP1-203ENST00000564286 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
CFDP1-203ENST00000564286 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
CFDP1-203ENST00000564286 MROH2BQ7Z745 1585 aa20.67■□□□□ 0.9
CFDP1-203ENST00000564286 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
CFDP1-203ENST00000564286 CADPSQ9ULU8 1353 aa20.57■□□□□ 0.88
CFDP1-203ENST00000564286 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
CFDP1-203ENST00000564286 MRC2Q9UBG0 1479 aa20.48■□□□□ 0.87
CFDP1-203ENST00000564286 TRIM41Q8WV44 630 aa20.45■□□□□ 0.86
CFDP1-203ENST00000564286 WIZO95785 1651 aa20.38■□□□□ 0.85
CFDP1-203ENST00000564286 WDR62O43379 1518 aa20.38■□□□□ 0.85
CFDP1-203ENST00000564286 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
CFDP1-203ENST00000564286 FANCD2Q9BXW9 1451 aa20.31■□□□□ 0.84
CFDP1-203ENST00000564286 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
CFDP1-203ENST00000564286 CFTRP13569 1480 aa20.24■□□□□ 0.83
CFDP1-203ENST00000564286 RSF1Q96T23 1441 aaPredicted RBP20.2■□□□□ 0.82
CFDP1-203ENST00000564286 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
CFDP1-203ENST00000564286 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
CFDP1-203ENST00000564286 IFT140Q96RY7 1462 aa19.97■□□□□ 0.79
CFDP1-203ENST00000564286 CCDC88BA6NC98 1476 aa19.95■□□□□ 0.78
CFDP1-203ENST00000564286 POTEDQ86YR6 584 aa19.94■□□□□ 0.78
CFDP1-203ENST00000564286 ZNF608Q9ULD9 1512 aaPredicted RBP19.91■□□□□ 0.78
CFDP1-203ENST00000564286 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
CFDP1-203ENST00000564286 ABCC8Q09428 1581 aa19.89■□□□□ 0.77
CFDP1-203ENST00000564286 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
CFDP1-203ENST00000564286 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
CFDP1-203ENST00000564286 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
CFDP1-203ENST00000564286 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
CFDP1-203ENST00000564286 ARHGEF11O15085 1522 aa19.8■□□□□ 0.76
CFDP1-203ENST00000564286 CYB5RLQ6IPT4 315 aa19.78■□□□□ 0.76
CFDP1-203ENST00000564286 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
CFDP1-203ENST00000564286 FBLN2P98095 1184 aa19.77■□□□□ 0.76
CFDP1-203ENST00000564286 EIF4G3O43432 1585 aaKnown RBP19.76■□□□□ 0.75
CFDP1-203ENST00000564286 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.758e-9■□□□□ 9.4
CFDP1-203ENST00000564286 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
CFDP1-203ENST00000564286 TARBP1Q13395 1621 aaKnown RBP19.66■□□□□ 0.74
CFDP1-203ENST00000564286 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
CFDP1-203ENST00000564286 SOGA1O94964 1423 aa19.64■□□□□ 0.73
CFDP1-203ENST00000564286 TDRD9Q8NDG6 1382 aaKnown RBP19.62■□□□□ 0.73
CFDP1-203ENST00000564286 CHD1O14646 1710 aa19.61■□□□□ 0.73
CFDP1-203ENST00000564286 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
CFDP1-203ENST00000564286 CHMP7Q8WUX9 453 aaPredicted RBP19.58■□□□□ 0.72
CFDP1-203ENST00000564286 ARAP1Q96P48 1450 aa19.58■□□□□ 0.72
CFDP1-203ENST00000564286 SNAPC4Q5SXM2 1469 aa19.53■□□□□ 0.72
CFDP1-203ENST00000564286 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
CFDP1-203ENST00000564286 WDR97A6NE52 1622 aa19.5■□□□□ 0.71
CFDP1-203ENST00000564286 MAPK8IP2Q13387 824 aaPredicted RBP19.49■□□□□ 0.71
CFDP1-203ENST00000564286 MAGI1Q96QZ7 1491 aaPredicted RBP19.48■□□□□ 0.71
CFDP1-203ENST00000564286 GRIN2BQ13224 1484 aa19.47■□□□□ 0.71
CFDP1-203ENST00000564286 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
CFDP1-203ENST00000564286 CUX1P39880 1505 aa19.43■□□□□ 0.7
CFDP1-203ENST00000564286 SYNJ2O15056 1496 aa19.42■□□□□ 0.7
CFDP1-203ENST00000564286 CLASP1Q7Z460 1538 aa19.42■□□□□ 0.7
CFDP1-203ENST00000564286 GAPVD1Q14C86 1478 aa19.36■□□□□ 0.69
CFDP1-203ENST00000564286 ABCA10Q8WWZ4 1543 aa19.28■□□□□ 0.68
CFDP1-203ENST00000564286 SCAF1Q9H7N4 1312 aaKnown RBP19.27■□□□□ 0.68
CFDP1-203ENST00000564286 SUPT5HO00267 1087 aaKnown RBP19.26■□□□□ 0.67
CFDP1-203ENST00000564286 PPP4R3CPQ6ZMV5 832 aa19.26■□□□□ 0.67
CFDP1-203ENST00000564286 PBRM1Q86U86 1689 aa19.26■□□□□ 0.67
CFDP1-203ENST00000564286 WRNQ14191 1432 aaPredicted RBP eCLIP19.24■□□□□ 0.67
CFDP1-203ENST00000564286 DMRT2Q9Y5R5 561 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms