RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 NISCHQ9Y2I1 1504 aa41.95■■■■■ 4.31
CCNF-203ENST00000564236 CCDC180Q9P1Z9 1646 aa37.57■■■■□ 3.6
CCNF-203ENST00000564236 ABCC9O60706 1549 aa37.29■■■■□ 3.56
CCNF-203ENST00000564236 RB1CC1Q8TDY2 1594 aa35.65■■■■□ 3.3
CCNF-203ENST00000564236 NACADO15069 1562 aa35.51■■■■□ 3.27
CCNF-203ENST00000564236 MYO15BQ96JP2 1530 aa35.19■■■■□ 3.22
CCNF-203ENST00000564236 DCAF8L2P0C7V8 631 aa35.07■■■■□ 3.2
CCNF-203ENST00000564236 DNAJC5BQ9UF47 199 aa34.87■■■■□ 3.17
CCNF-203ENST00000564236 ZCCHC6Q5VYS8 1495 aaKnown RBP34.83■■■■□ 3.17
CCNF-203ENST00000564236 DCAF1Q9Y4B6 1507 aa34.77■■■■□ 3.16
CCNF-203ENST00000564236 UNC13AQ9UPW8 1703 aa34.74■■■■□ 3.15
CCNF-203ENST00000564236 PABPN1Q86U42 306 aaKnown RBP eCLIP34.7■■■■□ 3.15
CCNF-203ENST00000564236 BICRAQ9NZM4 1560 aa34.63■■■■□ 3.13
CCNF-203ENST00000564236 SHROOM4Q9ULL8 1493 aa34.33■■■■□ 3.09
CCNF-203ENST00000564236 SCRIBQ14160 1630 aa34.11■■■■□ 3.05
CCNF-203ENST00000564236 EIF4G1Q04637 1599 aaKnown RBP33.74■■■□□ 2.99
CCNF-203ENST00000564236 CC2D2AQ9P2K1 1620 aa33.73■■■□□ 2.99
CCNF-203ENST00000564236 CECR2Q9BXF3 1484 aa33.63■■■□□ 2.97
CCNF-203ENST00000564236 NCAPD3P42695 1498 aa32.8■■■□□ 2.84
CCNF-203ENST00000564236 ATAD2BQ9ULI0 1458 aa32.68■■■□□ 2.82
CCNF-203ENST00000564236 SMARCA4P51532 1647 aa32.65■■■□□ 2.82
CCNF-203ENST00000564236 SMARCA2P51531 1590 aa32.59■■■□□ 2.81
CCNF-203ENST00000564236 HMGXB3Q12766 1538 aa32.56■■■□□ 2.8
CCNF-203ENST00000564236 BAZ1AQ9NRL2 1556 aaPredicted RBP32.54■■■□□ 2.8
CCNF-203ENST00000564236 PEG3Q9GZU2 1588 aa32.45■■■□□ 2.78
CCNF-203ENST00000564236 BAZ1BQ9UIG0 1483 aaKnown RBP32.31■■■□□ 2.76
CCNF-203ENST00000564236 MROH2BQ7Z745 1585 aa32.28■■■□□ 2.76
CCNF-203ENST00000564236 CUX2O14529 1486 aa32.2■■■□□ 2.75
CCNF-203ENST00000564236 ERCC6Q03468 1493 aa32.18■■■□□ 2.74
CCNF-203ENST00000564236 NESP48681 1621 aa32.09■■■□□ 2.73
CCNF-203ENST00000564236 LAMC3Q9Y6N6 1575 aa31.98■■■□□ 2.71
CCNF-203ENST00000564236 DNAJC5Q9H3Z4 198 aa31.95■■■□□ 2.71
CCNF-203ENST00000564236 WIZO95785 1651 aa31.83■■■□□ 2.69
CCNF-203ENST00000564236 THOC2Q8NI27 1593 aaKnown RBP31.8■■■□□ 2.68
CCNF-203ENST00000564236 PDS5BQ9NTI5 1447 aa31.79■■■□□ 2.68
CCNF-203ENST00000564236 CADPSQ9ULU8 1353 aa31.77■■■□□ 2.68
CCNF-203ENST00000564236 RSF1Q96T23 1441 aaPredicted RBP31.7■■■□□ 2.67
CCNF-203ENST00000564236 KIF21AQ7Z4S6 1674 aa31.65■■■□□ 2.66
CCNF-203ENST00000564236 TOP2AP11388 1531 aaKnown RBP31.54■■■□□ 2.64
CCNF-203ENST00000564236 MRC2Q9UBG0 1479 aa31.49■■■□□ 2.63
CCNF-203ENST00000564236 CFTRP13569 1480 aa31.47■■■□□ 2.63
CCNF-203ENST00000564236 WDR62O43379 1518 aa31.44■■■□□ 2.62
CCNF-203ENST00000564236 CEP164Q9UPV0 1460 aa31.38■■■□□ 2.61
CCNF-203ENST00000564236 FANCD2Q9BXW9 1451 aa31.37■■■□□ 2.61
CCNF-203ENST00000564236 CCDC88BA6NC98 1476 aa31.15■■■□□ 2.58
CCNF-203ENST00000564236 URB2Q14146 1524 aaKnown RBP31.1■■■□□ 2.57
CCNF-203ENST00000564236 PRDM2Q13029 1718 aa31.04■■■□□ 2.56
CCNF-203ENST00000564236 TOPBP1Q92547 1522 aa30.8■■■□□ 2.52
CCNF-203ENST00000564236 ABCC8Q09428 1581 aa30.79■■■□□ 2.52
CCNF-203ENST00000564236 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
CCNF-203ENST00000564236 DNMBPQ6XZF7 1577 aa30.71■■■□□ 2.51
CCNF-203ENST00000564236 OSCARQ8IYS5 282 aa30.68■■■□□ 2.5
CCNF-203ENST00000564236 ZNF608Q9ULD9 1512 aaPredicted RBP30.66■■■□□ 2.5
CCNF-203ENST00000564236 TARBP1Q13395 1621 aaKnown RBP30.52■■■□□ 2.48
CCNF-203ENST00000564236 POLA1P09884 1462 aaPredicted RBP30.5■■■□□ 2.47
CCNF-203ENST00000564236 EIF4G3O43432 1585 aaKnown RBP30.5■■■□□ 2.47
CCNF-203ENST00000564236 TRIM41Q8WV44 630 aa30.43■■■□□ 2.46
CCNF-203ENST00000564236 AQRO60306 1485 aaKnown RBP eCLIP30.39■■■□□ 2.462e-9■■■□□ 17.4
CCNF-203ENST00000564236 SOGA1O94964 1423 aa30.34■■■□□ 2.45
CCNF-203ENST00000564236 RAD54L2Q9Y4B4 1467 aa30.32■■■□□ 2.44
CCNF-203ENST00000564236 CUX1P39880 1505 aa30.32■■■□□ 2.44
CCNF-203ENST00000564236 WDR97A6NE52 1622 aa30.31■■■□□ 2.44
CCNF-203ENST00000564236 FGD5Q6ZNL6 1462 aa30.3■■■□□ 2.44
CCNF-203ENST00000564236 RIMBP3CA6NJZ7 1639 aa30.23■■■□□ 2.43
CCNF-203ENST00000564236 RIMBP3BA6NNM3 1639 aa30.23■■■□□ 2.43
CCNF-203ENST00000564236 RIMBP3Q9UFD9 1639 aa30.23■■■□□ 2.43
CCNF-203ENST00000564236 SUPT5HO00267 1087 aaKnown RBP30.22■■■□□ 2.43
CCNF-203ENST00000564236 TDRD9Q8NDG6 1382 aaKnown RBP30.22■■■□□ 2.43
CCNF-203ENST00000564236 ARHGEF11O15085 1522 aa30.2■■■□□ 2.42
CCNF-203ENST00000564236 CHD1O14646 1710 aa30.16■■■□□ 2.42
CCNF-203ENST00000564236 SNAPC4Q5SXM2 1469 aa30.1■■■□□ 2.41
CCNF-203ENST00000564236 MAGI1Q96QZ7 1491 aaPredicted RBP30.1■■■□□ 2.41
CCNF-203ENST00000564236 GRIN2BQ13224 1484 aa30.09■■■□□ 2.41
CCNF-203ENST00000564236 FBLN2P98095 1184 aa30.04■■■□□ 2.4
CCNF-203ENST00000564236 ABCA10Q8WWZ4 1543 aa30.04■■■□□ 2.4
CCNF-203ENST00000564236 SYNJ2O15056 1496 aa29.98■■■□□ 2.39
CCNF-203ENST00000564236 GAPVD1Q14C86 1478 aa29.98■■■□□ 2.39
CCNF-203ENST00000564236 CLASP1Q7Z460 1538 aa29.96■■■□□ 2.39
CCNF-203ENST00000564236 ABCA5Q8WWZ7 1642 aa29.95■■■□□ 2.38
CCNF-203ENST00000564236 CHMP7Q8WUX9 453 aaPredicted RBP29.94■■■□□ 2.38
CCNF-203ENST00000564236 WRNQ14191 1432 aaPredicted RBP eCLIP29.92■■■□□ 2.38
CCNF-203ENST00000564236 ARAP1Q96P48 1450 aa29.92■■■□□ 2.38
CCNF-203ENST00000564236 SYNJ1O43426 1573 aa29.91■■■□□ 2.38
CCNF-203ENST00000564236 TOP2BQ02880 1626 aa29.89■■■□□ 2.38
CCNF-203ENST00000564236 BIVM-ERCC5R4GMW8 1640 aa29.89■■■□□ 2.37
CCNF-203ENST00000564236 PBRM1Q86U86 1689 aa29.88■■■□□ 2.37
CCNF-203ENST00000564236 CYB5RLQ6IPT4 315 aa29.88■■■□□ 2.37
CCNF-203ENST00000564236 GRIN2AQ12879 1464 aa29.69■■■□□ 2.34
CCNF-203ENST00000564236 ADAMTS12P58397 1594 aa29.69■■■□□ 2.34
CCNF-203ENST00000564236 ERICH3Q5RHP9 1530 aa29.66■■■□□ 2.34
CCNF-203ENST00000564236 FHAD1B1AJZ9 1412 aa29.64■■■□□ 2.34
CCNF-203ENST00000564236 NUP160Q12769 1436 aa29.64■■■□□ 2.34
CCNF-203ENST00000564236 CEP170Q5SW79 1584 aa29.56■■■□□ 2.32
CCNF-203ENST00000564236 SHROOM2Q13796 1616 aa29.47■■■□□ 2.31
CCNF-203ENST00000564236 TRHP20396 242 aaPredicted RBP29.43■■■□□ 2.3
CCNF-203ENST00000564236 ERCC6L2Q5T890 1561 aa29.43■■■□□ 2.3
CCNF-203ENST00000564236 KIF27Q86VH2 1401 aa29.3■■■□□ 2.28
CCNF-203ENST00000564236 IGF1RP08069 1367 aa29.3■■■□□ 2.28
CCNF-203ENST00000564236 RUSC2Q8N2Y8 1516 aa29.27■■■□□ 2.28
CCNF-203ENST00000564236 JPH4Q96JJ6 628 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms