RNA–Protein interactions for RNA: ENST00000564204.1

KIFC3-217, Transcript of kinesin family member C3, humanhuman

TSL 4

Gene KIFC3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-217ENST00000564204 NISCHQ9Y2I1 1504 aa37.98■■■■□ 3.67
KIFC3-217ENST00000564204 CCDC180Q9P1Z9 1646 aa33.79■■■■□ 3
KIFC3-217ENST00000564204 ABCC9O60706 1549 aa33.23■■■□□ 2.91
KIFC3-217ENST00000564204 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
KIFC3-217ENST00000564204 NACADO15069 1562 aa31.78■■■□□ 2.68
KIFC3-217ENST00000564204 DCAF8L2P0C7V8 631 aa31.76■■■□□ 2.67
KIFC3-217ENST00000564204 ZCCHC6Q5VYS8 1495 aaKnown RBP31.62■■■□□ 2.65
KIFC3-217ENST00000564204 MYO15BQ96JP2 1530 aa31.54■■■□□ 2.64
KIFC3-217ENST00000564204 DCAF1Q9Y4B6 1507 aa31.38■■■□□ 2.61
KIFC3-217ENST00000564204 UNC13AQ9UPW8 1703 aa31.22■■■□□ 2.59
KIFC3-217ENST00000564204 PABPN1Q86U42 306 aaKnown RBP eCLIP31.04■■■□□ 2.56
KIFC3-217ENST00000564204 BICRAQ9NZM4 1560 aa30.97■■■□□ 2.55
KIFC3-217ENST00000564204 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
KIFC3-217ENST00000564204 DNAJC5BQ9UF47 199 aa30.65■■■□□ 2.5
KIFC3-217ENST00000564204 SHROOM4Q9ULL8 1493 aa30.5■■■□□ 2.47
KIFC3-217ENST00000564204 EIF4G1Q04637 1599 aaKnown RBP30.12■■■□□ 2.41
KIFC3-217ENST00000564204 CC2D2AQ9P2K1 1620 aa30.04■■■□□ 2.4
KIFC3-217ENST00000564204 CECR2Q9BXF3 1484 aa29.84■■■□□ 2.37
KIFC3-217ENST00000564204 SMARCA4P51532 1647 aa29.5■■■□□ 2.31
KIFC3-217ENST00000564204 BAZ1AQ9NRL2 1556 aaPredicted RBP29.41■■■□□ 2.3
KIFC3-217ENST00000564204 ATAD2BQ9ULI0 1458 aa29.37■■■□□ 2.29
KIFC3-217ENST00000564204 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
KIFC3-217ENST00000564204 MROH2BQ7Z745 1585 aa29.31■■■□□ 2.28
KIFC3-217ENST00000564204 SMARCA2P51531 1590 aa29.28■■■□□ 2.28
KIFC3-217ENST00000564204 PEG3Q9GZU2 1588 aa29.19■■■□□ 2.26
KIFC3-217ENST00000564204 HMGXB3Q12766 1538 aa29.19■■■□□ 2.26
KIFC3-217ENST00000564204 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
KIFC3-217ENST00000564204 WIZO95785 1651 aa28.99■■■□□ 2.23
KIFC3-217ENST00000564204 RSF1Q96T23 1441 aaPredicted RBP28.91■■■□□ 2.22
KIFC3-217ENST00000564204 NESP48681 1621 aa28.75■■■□□ 2.19
KIFC3-217ENST00000564204 TOP2AP11388 1531 aaKnown RBP28.63■■■□□ 2.17
KIFC3-217ENST00000564204 ERCC6Q03468 1493 aa28.59■■■□□ 2.17
KIFC3-217ENST00000564204 LAMC3Q9Y6N6 1575 aa28.57■■■□□ 2.16
KIFC3-217ENST00000564204 CADPSQ9ULU8 1353 aa28.48■■■□□ 2.15
KIFC3-217ENST00000564204 KIF21AQ7Z4S6 1674 aa28.39■■■□□ 2.14
KIFC3-217ENST00000564204 PDS5BQ9NTI5 1447 aa28.36■■■□□ 2.13
KIFC3-217ENST00000564204 CCDC88BA6NC98 1476 aa28.32■■■□□ 2.12
KIFC3-217ENST00000564204 CUX2O14529 1486 aa28.31■■■□□ 2.12
KIFC3-217ENST00000564204 THOC2Q8NI27 1593 aaKnown RBP28.31■■■□□ 2.12
KIFC3-217ENST00000564204 CFTRP13569 1480 aa28.3■■■□□ 2.12
KIFC3-217ENST00000564204 FANCD2Q9BXW9 1451 aa28.17■■■□□ 2.1
KIFC3-217ENST00000564204 CEP164Q9UPV0 1460 aa28.13■■■□□ 2.09
KIFC3-217ENST00000564204 MRC2Q9UBG0 1479 aa28.12■■■□□ 2.09
KIFC3-217ENST00000564204 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
KIFC3-217ENST00000564204 PRDM2Q13029 1718 aa28.08■■■□□ 2.09
KIFC3-217ENST00000564204 WDR62O43379 1518 aa28.04■■■□□ 2.08
KIFC3-217ENST00000564204 URB2Q14146 1524 aaKnown RBP27.93■■■□□ 2.06
KIFC3-217ENST00000564204 TOPBP1Q92547 1522 aa27.72■■■□□ 2.03
KIFC3-217ENST00000564204 DNMBPQ6XZF7 1577 aa27.66■■■□□ 2.02
KIFC3-217ENST00000564204 ABCC8Q09428 1581 aa27.62■■■□□ 2.01
KIFC3-217ENST00000564204 DNAJC5Q9H3Z4 198 aa27.6■■■□□ 2.01
KIFC3-217ENST00000564204 IFT140Q96RY7 1462 aa27.53■■■□□ 2
KIFC3-217ENST00000564204 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■□□□ 1.99
KIFC3-217ENST00000564204 CUX1P39880 1505 aa27.5■■□□□ 1.99
KIFC3-217ENST00000564204 POLA1P09884 1462 aaPredicted RBP27.48■■□□□ 1.99
KIFC3-217ENST00000564204 TARBP1Q13395 1621 aaKnown RBP27.45■■□□□ 1.98
KIFC3-217ENST00000564204 FGD5Q6ZNL6 1462 aa27.4■■□□□ 1.98
KIFC3-217ENST00000564204 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
KIFC3-217ENST00000564204 EIF4G3O43432 1585 aaKnown RBP27.35■■□□□ 1.97
KIFC3-217ENST00000564204 SOGA1O94964 1423 aa27.33■■□□□ 1.97
KIFC3-217ENST00000564204 AQRO60306 1485 aaKnown RBP eCLIP27.31■■□□□ 1.96
KIFC3-217ENST00000564204 TDRD9Q8NDG6 1382 aaKnown RBP27.23■■□□□ 1.95
KIFC3-217ENST00000564204 WRNQ14191 1432 aaPredicted RBP eCLIP27.23■■□□□ 1.95
KIFC3-217ENST00000564204 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
KIFC3-217ENST00000564204 WDR97A6NE52 1622 aa27.19■■□□□ 1.94
KIFC3-217ENST00000564204 TOP2BQ02880 1626 aa27.19■■□□□ 1.94
KIFC3-217ENST00000564204 BIVM-ERCC5R4GMW8 1640 aa27.19■■□□□ 1.94
KIFC3-217ENST00000564204 ABCA10Q8WWZ4 1543 aa27.11■■□□□ 1.93
KIFC3-217ENST00000564204 OSCARQ8IYS5 282 aa27.11■■□□□ 1.93
KIFC3-217ENST00000564204 CHD1O14646 1710 aa27.04■■□□□ 1.92
KIFC3-217ENST00000564204 SNAPC4Q5SXM2 1469 aa27.04■■□□□ 1.92
KIFC3-217ENST00000564204 ABCA5Q8WWZ7 1642 aa27.04■■□□□ 1.92
KIFC3-217ENST00000564204 GRIN2BQ13224 1484 aa27.02■■□□□ 1.92
KIFC3-217ENST00000564204 GAPVD1Q14C86 1478 aa27.02■■□□□ 1.92
KIFC3-217ENST00000564204 PBRM1Q86U86 1689 aa27■■□□□ 1.91
KIFC3-217ENST00000564204 FBLN2P98095 1184 aa26.96■■□□□ 1.91
KIFC3-217ENST00000564204 MAGI1Q96QZ7 1491 aaPredicted RBP26.95■■□□□ 1.91
KIFC3-217ENST00000564204 SYNJ2O15056 1496 aa26.87■■□□□ 1.89
KIFC3-217ENST00000564204 CHMP7Q8WUX9 453 aaPredicted RBP26.84■■□□□ 1.89
KIFC3-217ENST00000564204 ADAMTS12P58397 1594 aa26.78■■□□□ 1.88
KIFC3-217ENST00000564204 RIMBP3CA6NJZ7 1639 aa26.76■■□□□ 1.87
KIFC3-217ENST00000564204 RIMBP3BA6NNM3 1639 aa26.76■■□□□ 1.87
KIFC3-217ENST00000564204 RIMBP3Q9UFD9 1639 aa26.76■■□□□ 1.87
KIFC3-217ENST00000564204 ERICH3Q5RHP9 1530 aa26.76■■□□□ 1.87
KIFC3-217ENST00000564204 ARHGEF11O15085 1522 aa26.74■■□□□ 1.87
KIFC3-217ENST00000564204 CLASP1Q7Z460 1538 aa26.74■■□□□ 1.87
KIFC3-217ENST00000564204 GRIN2AQ12879 1464 aa26.69■■□□□ 1.86
KIFC3-217ENST00000564204 FHAD1B1AJZ9 1412 aa26.69■■□□□ 1.86
KIFC3-217ENST00000564204 TRIM41Q8WV44 630 aa26.68■■□□□ 1.86
KIFC3-217ENST00000564204 KIF27Q86VH2 1401 aa26.65■■□□□ 1.86
KIFC3-217ENST00000564204 IGF1RP08069 1367 aa26.6■■□□□ 1.85
KIFC3-217ENST00000564204 CEP170Q5SW79 1584 aa26.6■■□□□ 1.85
KIFC3-217ENST00000564204 NUP160Q12769 1436 aa26.58■■□□□ 1.85
KIFC3-217ENST00000564204 ARAP1Q96P48 1450 aa26.53■■□□□ 1.84
KIFC3-217ENST00000564204 CUL7Q14999 1698 aa26.49■■□□□ 1.83
KIFC3-217ENST00000564204 CYB5RLQ6IPT4 315 aa26.48■■□□□ 1.83
KIFC3-217ENST00000564204 RUSC2Q8N2Y8 1516 aa26.48■■□□□ 1.83
KIFC3-217ENST00000564204 ERCC6L2Q5T890 1561 aa26.41■■□□□ 1.82
KIFC3-217ENST00000564204 SHROOM2Q13796 1616 aa26.41■■□□□ 1.82
KIFC3-217ENST00000564204 CARMIL1Q5VZK9 1371 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms