RNA–Protein interactions for RNA: ENST00000564178.5

PKM-210, Transcript of pyruvate kinase M1/2, humanhuman

TSL 4

Gene PKM, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-210ENST00000564178 NISCHQ9Y2I1 1504 aa22.29■■□□□ 1.16
PKM-210ENST00000564178 CCDC180Q9P1Z9 1646 aa19.66■□□□□ 0.74
PKM-210ENST00000564178 ABCC9O60706 1549 aa18.86■□□□□ 0.61
PKM-210ENST00000564178 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
PKM-210ENST00000564178 DCAF1Q9Y4B6 1507 aa18.48■□□□□ 0.55
PKM-210ENST00000564178 MYO15BQ96JP2 1530 aa18.43■□□□□ 0.54
PKM-210ENST00000564178 NACADO15069 1562 aa18.41■□□□□ 0.54
PKM-210ENST00000564178 DCAF8L2P0C7V8 631 aa18.4■□□□□ 0.54
PKM-210ENST00000564178 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
PKM-210ENST00000564178 SCRIBQ14160 1630 aa17.94■□□□□ 0.46
PKM-210ENST00000564178 UNC13AQ9UPW8 1703 aa17.93■□□□□ 0.46
PKM-210ENST00000564178 BICRAQ9NZM4 1560 aa17.78■□□□□ 0.44
PKM-210ENST00000564178 SHROOM4Q9ULL8 1493 aa17.77■□□□□ 0.44
PKM-210ENST00000564178 PABPN1Q86U42 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
PKM-210ENST00000564178 CECR2Q9BXF3 1484 aa17.32■□□□□ 0.36
PKM-210ENST00000564178 EIF4G1Q04637 1599 aaKnown RBP17.26■□□□□ 0.35
PKM-210ENST00000564178 BAZ1AQ9NRL2 1556 aaPredicted RBP17.24■□□□□ 0.35
PKM-210ENST00000564178 SMARCA4P51532 1647 aa17.21■□□□□ 0.35
PKM-210ENST00000564178 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
PKM-210ENST00000564178 RSF1Q96T23 1441 aaPredicted RBP17.12■□□□□ 0.33
PKM-210ENST00000564178 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
PKM-210ENST00000564178 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
PKM-210ENST00000564178 ATAD2BQ9ULI0 1458 aa17.04■□□□□ 0.32
PKM-210ENST00000564178 SMARCA2P51531 1590 aa17.02■□□□□ 0.32
PKM-210ENST00000564178 WIZO95785 1651 aa17.02■□□□□ 0.32
PKM-210ENST00000564178 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
PKM-210ENST00000564178 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
PKM-210ENST00000564178 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
PKM-210ENST00000564178 SUPT5HO00267 1087 aaKnown RBP16.9■□□□□ 0.3
PKM-210ENST00000564178 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.29
PKM-210ENST00000564178 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
PKM-210ENST00000564178 CCDC88BA6NC98 1476 aa16.66■□□□□ 0.26
PKM-210ENST00000564178 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
PKM-210ENST00000564178 CFTRP13569 1480 aa16.48■□□□□ 0.23
PKM-210ENST00000564178 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
PKM-210ENST00000564178 NESP48681 1621 aa16.44■□□□□ 0.22
PKM-210ENST00000564178 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
PKM-210ENST00000564178 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
PKM-210ENST00000564178 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
PKM-210ENST00000564178 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.19
PKM-210ENST00000564178 CEP164Q9UPV0 1460 aa16.23■□□□□ 0.19
PKM-210ENST00000564178 ERCC6Q03468 1493 aa16.22■□□□□ 0.19
PKM-210ENST00000564178 MRC2Q9UBG0 1479 aa16.15■□□□□ 0.18
PKM-210ENST00000564178 ABCC8Q09428 1581 aa16.14■□□□□ 0.17
PKM-210ENST00000564178 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
PKM-210ENST00000564178 URB2Q14146 1524 aaKnown RBP16.12■□□□□ 0.17
PKM-210ENST00000564178 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
PKM-210ENST00000564178 CUX1P39880 1505 aa16.1■□□□□ 0.17
PKM-210ENST00000564178 WDR62O43379 1518 aa16.09■□□□□ 0.17
PKM-210ENST00000564178 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
PKM-210ENST00000564178 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
PKM-210ENST00000564178 BIVM-ERCC5R4GMW8 1640 aa16.06■□□□□ 0.16
PKM-210ENST00000564178 SYNJ1O43426 1573 aa16.06■□□□□ 0.16
PKM-210ENST00000564178 TOP2BQ02880 1626 aa16.05■□□□□ 0.16
PKM-210ENST00000564178 CHIC1Q5VXU3 224 aa16.01■□□□□ 0.15
PKM-210ENST00000564178 FGD5Q6ZNL6 1462 aa15.97■□□□□ 0.15
PKM-210ENST00000564178 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
PKM-210ENST00000564178 TRIM41Q8WV44 630 aa15.95■□□□□ 0.14
PKM-210ENST00000564178 CUX2O14529 1486 aa15.95■□□□□ 0.14
PKM-210ENST00000564178 SOGA1O94964 1423 aa15.9■□□□□ 0.14
PKM-210ENST00000564178 TARBP1Q13395 1621 aaKnown RBP15.89■□□□□ 0.13
PKM-210ENST00000564178 IFT140Q96RY7 1462 aa15.89■□□□□ 0.13
PKM-210ENST00000564178 RAD54L2Q9Y4B4 1467 aa15.89■□□□□ 0.13
PKM-210ENST00000564178 WDR97A6NE52 1622 aa15.86■□□□□ 0.13
PKM-210ENST00000564178 ABCA10Q8WWZ4 1543 aa15.85■□□□□ 0.13
PKM-210ENST00000564178 ZNF608Q9ULD9 1512 aaPredicted RBP15.78■□□□□ 0.12
PKM-210ENST00000564178 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
PKM-210ENST00000564178 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
PKM-210ENST00000564178 KIF27Q86VH2 1401 aa15.75■□□□□ 0.11
PKM-210ENST00000564178 EIF4G3O43432 1585 aaKnown RBP15.74■□□□□ 0.11
PKM-210ENST00000564178 AQRO60306 1485 aaKnown RBP eCLIP15.73■□□□□ 0.111e-16■■■■■ 33.5
PKM-210ENST00000564178 RUSC2Q8N2Y8 1516 aa15.73■□□□□ 0.11
PKM-210ENST00000564178 GAPVD1Q14C86 1478 aa15.72■□□□□ 0.11
PKM-210ENST00000564178 EEA1Q15075 1411 aa15.69■□□□□ 0.1
PKM-210ENST00000564178 PBRM1Q86U86 1689 aa15.68■□□□□ 0.1
PKM-210ENST00000564178 GRIN2BQ13224 1484 aa15.67■□□□□ 0.1
PKM-210ENST00000564178 ERICH3Q5RHP9 1530 aa15.67■□□□□ 0.1
PKM-210ENST00000564178 IGF1RP08069 1367 aa15.65■□□□□ 0.1
PKM-210ENST00000564178 CSRNP3Q8WYN3 585 aa15.61■□□□□ 0.09
PKM-210ENST00000564178 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
PKM-210ENST00000564178 MAGI1Q96QZ7 1491 aaPredicted RBP15.6■□□□□ 0.09
PKM-210ENST00000564178 FAM9AQ8IZU1 332 aaPredicted RBP15.59■□□□□ 0.09
PKM-210ENST00000564178 CUL7Q14999 1698 aa15.59■□□□□ 0.09
PKM-210ENST00000564178 ADAMTS12P58397 1594 aa15.58■□□□□ 0.08
PKM-210ENST00000564178 CARMIL1Q5VZK9 1371 aa15.56■□□□□ 0.08
PKM-210ENST00000564178 FHAD1B1AJZ9 1412 aa15.56■□□□□ 0.08
PKM-210ENST00000564178 PRXQ9BXM0 1461 aa15.56■□□□□ 0.08
PKM-210ENST00000564178 SYNJ2O15056 1496 aa15.53■□□□□ 0.08
PKM-210ENST00000564178 KIF21BO75037 1637 aa15.51■□□□□ 0.07
PKM-210ENST00000564178 RAPGEF2Q9Y4G8 1499 aa15.51■□□□□ 0.07
PKM-210ENST00000564178 CHD1O14646 1710 aa15.48■□□□□ 0.07
PKM-210ENST00000564178 GRIN2AQ12879 1464 aa15.47■□□□□ 0.07
PKM-210ENST00000564178 CHMP7Q8WUX9 453 aaPredicted RBP15.47■□□□□ 0.07
PKM-210ENST00000564178 FBLN2P98095 1184 aa15.43■□□□□ 0.06
PKM-210ENST00000564178 GOLGA3Q08378 1498 aa15.43■□□□□ 0.06
PKM-210ENST00000564178 NUP160Q12769 1436 aa15.41■□□□□ 0.06
PKM-210ENST00000564178 CEP170Q5SW79 1584 aa15.4■□□□□ 0.06
PKM-210ENST00000564178 LOC105371045A0A1W2PR82 267 aa15.35■□□□□ 0.05
PKM-210ENST00000564178 CTTNBP2Q8WZ74 1663 aa15.35■□□□□ 0.05
PKM-210ENST00000564178 KIAA0586Q9BVV6 1533 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms