RNA–Protein interactions for RNA: ENST00000564099.1

ATP2C2-205, Transcript of ATPase secretory pathway Ca2+ transporting 2, humanhuman

TSL 3

Gene ATP2C2, Length 386 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C2-205ENST00000564099 NISCHQ9Y2I1 1504 aa32.77■■■□□ 2.84
ATP2C2-205ENST00000564099 CCDC180Q9P1Z9 1646 aa29.17■■■□□ 2.26
ATP2C2-205ENST00000564099 ABCC9O60706 1549 aa28.47■■■□□ 2.15
ATP2C2-205ENST00000564099 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
ATP2C2-205ENST00000564099 NACADO15069 1562 aa27.43■■□□□ 1.98
ATP2C2-205ENST00000564099 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
ATP2C2-205ENST00000564099 ZCCHC6Q5VYS8 1495 aaKnown RBP27.29■■□□□ 1.96
ATP2C2-205ENST00000564099 DCAF8L2P0C7V8 631 aa27.23■■□□□ 1.95
ATP2C2-205ENST00000564099 DCAF1Q9Y4B6 1507 aa27.17■■□□□ 1.94
ATP2C2-205ENST00000564099 UNC13AQ9UPW8 1703 aa26.86■■□□□ 1.89
ATP2C2-205ENST00000564099 BICRAQ9NZM4 1560 aa26.65■■□□□ 1.86
ATP2C2-205ENST00000564099 PABPN1Q86U42 306 aaKnown RBP eCLIP26.58■■□□□ 1.85
ATP2C2-205ENST00000564099 SCRIBQ14160 1630 aa26.52■■□□□ 1.84
ATP2C2-205ENST00000564099 SHROOM4Q9ULL8 1493 aa26.38■■□□□ 1.81
ATP2C2-205ENST00000564099 DNAJC5BQ9UF47 199 aa26.21■■□□□ 1.79
ATP2C2-205ENST00000564099 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
ATP2C2-205ENST00000564099 CC2D2AQ9P2K1 1620 aa25.8■■□□□ 1.72
ATP2C2-205ENST00000564099 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
ATP2C2-205ENST00000564099 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
ATP2C2-205ENST00000564099 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.65
ATP2C2-205ENST00000564099 NCAPD3P42695 1498 aa25.32■■□□□ 1.64
ATP2C2-205ENST00000564099 ATAD2BQ9ULI0 1458 aa25.3■■□□□ 1.64
ATP2C2-205ENST00000564099 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
ATP2C2-205ENST00000564099 MROH2BQ7Z745 1585 aa25.24■■□□□ 1.63
ATP2C2-205ENST00000564099 PEG3Q9GZU2 1588 aa25.23■■□□□ 1.63
ATP2C2-205ENST00000564099 HMGXB3Q12766 1538 aa25.18■■□□□ 1.62
ATP2C2-205ENST00000564099 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
ATP2C2-205ENST00000564099 WIZO95785 1651 aa24.96■■□□□ 1.59
ATP2C2-205ENST00000564099 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.59
ATP2C2-205ENST00000564099 TOP2AP11388 1531 aaKnown RBP24.69■■□□□ 1.54
ATP2C2-205ENST00000564099 NESP48681 1621 aa24.65■■□□□ 1.54
ATP2C2-205ENST00000564099 LAMC3Q9Y6N6 1575 aa24.63■■□□□ 1.53
ATP2C2-205ENST00000564099 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
ATP2C2-205ENST00000564099 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
ATP2C2-205ENST00000564099 PDS5BQ9NTI5 1447 aa24.44■■□□□ 1.5
ATP2C2-205ENST00000564099 CFTRP13569 1480 aa24.42■■□□□ 1.5
ATP2C2-205ENST00000564099 CCDC88BA6NC98 1476 aa24.41■■□□□ 1.5
ATP2C2-205ENST00000564099 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.49
ATP2C2-205ENST00000564099 CUX2O14529 1486 aa24.35■■□□□ 1.49
ATP2C2-205ENST00000564099 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.48
ATP2C2-205ENST00000564099 PRDM2Q13029 1718 aa24.25■■□□□ 1.47
ATP2C2-205ENST00000564099 FANCD2Q9BXW9 1451 aa24.24■■□□□ 1.47
ATP2C2-205ENST00000564099 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
ATP2C2-205ENST00000564099 SUPT5HO00267 1087 aaKnown RBP24.18■■□□□ 1.46
ATP2C2-205ENST00000564099 MRC2Q9UBG0 1479 aa24.18■■□□□ 1.46
ATP2C2-205ENST00000564099 WDR62O43379 1518 aa24.13■■□□□ 1.45
ATP2C2-205ENST00000564099 URB2Q14146 1524 aaKnown RBP24.02■■□□□ 1.44
ATP2C2-205ENST00000564099 ABCC8Q09428 1581 aa23.88■■□□□ 1.41
ATP2C2-205ENST00000564099 TOPBP1Q92547 1522 aa23.87■■□□□ 1.41
ATP2C2-205ENST00000564099 DNMBPQ6XZF7 1577 aa23.84■■□□□ 1.41
ATP2C2-205ENST00000564099 IFT140Q96RY7 1462 aa23.71■■□□□ 1.39
ATP2C2-205ENST00000564099 CUX1P39880 1505 aa23.69■■□□□ 1.38
ATP2C2-205ENST00000564099 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
ATP2C2-205ENST00000564099 TARBP1Q13395 1621 aaKnown RBP23.65■■□□□ 1.38
ATP2C2-205ENST00000564099 DNAJC5Q9H3Z4 198 aa23.64■■□□□ 1.37
ATP2C2-205ENST00000564099 ZNF608Q9ULD9 1512 aaPredicted RBP23.6■■□□□ 1.37
ATP2C2-205ENST00000564099 FGD5Q6ZNL6 1462 aa23.57■■□□□ 1.36
ATP2C2-205ENST00000564099 SOGA1O94964 1423 aa23.54■■□□□ 1.36
ATP2C2-205ENST00000564099 RAD54L2Q9Y4B4 1467 aa23.53■■□□□ 1.36
ATP2C2-205ENST00000564099 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
ATP2C2-205ENST00000564099 BIVM-ERCC5R4GMW8 1640 aa23.49■■□□□ 1.35
ATP2C2-205ENST00000564099 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
ATP2C2-205ENST00000564099 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
ATP2C2-205ENST00000564099 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
ATP2C2-205ENST00000564099 SYNJ1O43426 1573 aa23.45■■□□□ 1.34
ATP2C2-205ENST00000564099 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.34
ATP2C2-205ENST00000564099 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
ATP2C2-205ENST00000564099 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
ATP2C2-205ENST00000564099 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
ATP2C2-205ENST00000564099 ABCA5Q8WWZ7 1642 aa23.3■■□□□ 1.32
ATP2C2-205ENST00000564099 GRIN2BQ13224 1484 aa23.28■■□□□ 1.32
ATP2C2-205ENST00000564099 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
ATP2C2-205ENST00000564099 PBRM1Q86U86 1689 aa23.24■■□□□ 1.31
ATP2C2-205ENST00000564099 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
ATP2C2-205ENST00000564099 CHD1O14646 1710 aa23.23■■□□□ 1.31
ATP2C2-205ENST00000564099 SNAPC4Q5SXM2 1469 aa23.23■■□□□ 1.31
ATP2C2-205ENST00000564099 SYNJ2O15056 1496 aa23.14■■□□□ 1.29
ATP2C2-205ENST00000564099 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
ATP2C2-205ENST00000564099 FBLN2P98095 1184 aa23.1■■□□□ 1.29
ATP2C2-205ENST00000564099 CHMP7Q8WUX9 453 aaPredicted RBP23.08■■□□□ 1.29
ATP2C2-205ENST00000564099 ADAMTS12P58397 1594 aa23.05■■□□□ 1.28
ATP2C2-205ENST00000564099 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
ATP2C2-205ENST00000564099 CLASP1Q7Z460 1538 aa23■■□□□ 1.27
ATP2C2-205ENST00000564099 KIF27Q86VH2 1401 aa22.99■■□□□ 1.27
ATP2C2-205ENST00000564099 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
ATP2C2-205ENST00000564099 IGF1RP08069 1367 aa22.96■■□□□ 1.27
ATP2C2-205ENST00000564099 RIMBP3CA6NJZ7 1639 aa22.94■■□□□ 1.26
ATP2C2-205ENST00000564099 RIMBP3BA6NNM3 1639 aa22.94■■□□□ 1.26
ATP2C2-205ENST00000564099 RIMBP3Q9UFD9 1639 aa22.94■■□□□ 1.26
ATP2C2-205ENST00000564099 ARHGEF11O15085 1522 aa22.93■■□□□ 1.26
ATP2C2-205ENST00000564099 NUP160Q12769 1436 aa22.91■■□□□ 1.26
ATP2C2-205ENST00000564099 CUL7Q14999 1698 aa22.88■■□□□ 1.25
ATP2C2-205ENST00000564099 TRIM41Q8WV44 630 aa22.87■■□□□ 1.25
ATP2C2-205ENST00000564099 CEP170Q5SW79 1584 aa22.87■■□□□ 1.25
ATP2C2-205ENST00000564099 RUSC2Q8N2Y8 1516 aa22.79■■□□□ 1.24
ATP2C2-205ENST00000564099 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
ATP2C2-205ENST00000564099 SHROOM2Q13796 1616 aa22.76■■□□□ 1.23
ATP2C2-205ENST00000564099 ARAP1Q96P48 1450 aa22.75■■□□□ 1.23
ATP2C2-205ENST00000564099 KIAA0586Q9BVV6 1533 aa22.68■■□□□ 1.22
ATP2C2-205ENST00000564099 CYB5RLQ6IPT4 315 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms