RNA–Protein interactions for RNA: ENST00000564070.1

SPSB3-205, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-205ENST00000564070 NISCHQ9Y2I1 1504 aa39.11■■■■□ 3.85
SPSB3-205ENST00000564070 CCDC180Q9P1Z9 1646 aa34.84■■■■□ 3.17
SPSB3-205ENST00000564070 ABCC9O60706 1549 aa34.65■■■■□ 3.14
SPSB3-205ENST00000564070 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
SPSB3-205ENST00000564070 NACADO15069 1562 aa32.75■■■□□ 2.83
SPSB3-205ENST00000564070 DCAF8L2P0C7V8 631 aa32.69■■■□□ 2.82
SPSB3-205ENST00000564070 ZCCHC6Q5VYS8 1495 aaKnown RBP32.58■■■□□ 2.81
SPSB3-205ENST00000564070 MYO15BQ96JP2 1530 aa32.57■■■□□ 2.8
SPSB3-205ENST00000564070 DNAJC5BQ9UF47 199 aa32.56■■■□□ 2.8
SPSB3-205ENST00000564070 DCAF1Q9Y4B6 1507 aa32.4■■■□□ 2.78
SPSB3-205ENST00000564070 PABPN1Q86U42 306 aaKnown RBP eCLIP32.34■■■□□ 2.77
SPSB3-205ENST00000564070 UNC13AQ9UPW8 1703 aa32.19■■■□□ 2.74
SPSB3-205ENST00000564070 BICRAQ9NZM4 1560 aa32.01■■■□□ 2.71
SPSB3-205ENST00000564070 SCRIBQ14160 1630 aa31.73■■■□□ 2.67
SPSB3-205ENST00000564070 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
SPSB3-205ENST00000564070 CC2D2AQ9P2K1 1620 aa31.24■■■□□ 2.59
SPSB3-205ENST00000564070 EIF4G1Q04637 1599 aaKnown RBP31.17■■■□□ 2.58
SPSB3-205ENST00000564070 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.58
SPSB3-205ENST00000564070 SMARCA4P51532 1647 aa30.36■■■□□ 2.45
SPSB3-205ENST00000564070 BAZ1AQ9NRL2 1556 aaPredicted RBP30.34■■■□□ 2.45
SPSB3-205ENST00000564070 NCAPD3P42695 1498 aa30.21■■■□□ 2.43
SPSB3-205ENST00000564070 ATAD2BQ9ULI0 1458 aa30.2■■■□□ 2.43
SPSB3-205ENST00000564070 SMARCA2P51531 1590 aa30.19■■■□□ 2.42
SPSB3-205ENST00000564070 MROH2BQ7Z745 1585 aa30.12■■■□□ 2.41
SPSB3-205ENST00000564070 PEG3Q9GZU2 1588 aa30.1■■■□□ 2.41
SPSB3-205ENST00000564070 HMGXB3Q12766 1538 aa30.08■■■□□ 2.41
SPSB3-205ENST00000564070 BAZ1BQ9UIG0 1483 aaKnown RBP29.96■■■□□ 2.39
SPSB3-205ENST00000564070 ERCC6Q03468 1493 aa29.83■■■□□ 2.37
SPSB3-205ENST00000564070 NESP48681 1621 aa29.81■■■□□ 2.36
SPSB3-205ENST00000564070 WIZO95785 1651 aa29.79■■■□□ 2.36
SPSB3-205ENST00000564070 RSF1Q96T23 1441 aaPredicted RBP29.75■■■□□ 2.35
SPSB3-205ENST00000564070 DNAJC5Q9H3Z4 198 aa29.73■■■□□ 2.35
SPSB3-205ENST00000564070 CUX2O14529 1486 aa29.7■■■□□ 2.35
SPSB3-205ENST00000564070 TOP2AP11388 1531 aaKnown RBP29.5■■■□□ 2.31
SPSB3-205ENST00000564070 LAMC3Q9Y6N6 1575 aa29.45■■■□□ 2.31
SPSB3-205ENST00000564070 THOC2Q8NI27 1593 aaKnown RBP29.39■■■□□ 2.3
SPSB3-205ENST00000564070 KIF21AQ7Z4S6 1674 aa29.34■■■□□ 2.29
SPSB3-205ENST00000564070 CADPSQ9ULU8 1353 aa29.31■■■□□ 2.28
SPSB3-205ENST00000564070 PDS5BQ9NTI5 1447 aa29.3■■■□□ 2.28
SPSB3-205ENST00000564070 CFTRP13569 1480 aa29.14■■■□□ 2.26
SPSB3-205ENST00000564070 CCDC88BA6NC98 1476 aa29.12■■■□□ 2.25
SPSB3-205ENST00000564070 MRC2Q9UBG0 1479 aa29.07■■■□□ 2.24
SPSB3-205ENST00000564070 WDR62O43379 1518 aa28.99■■■□□ 2.23
SPSB3-205ENST00000564070 FANCD2Q9BXW9 1451 aa28.98■■■□□ 2.23
SPSB3-205ENST00000564070 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
SPSB3-205ENST00000564070 PRDM2Q13029 1718 aa28.94■■■□□ 2.22
SPSB3-205ENST00000564070 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
SPSB3-205ENST00000564070 URB2Q14146 1524 aaKnown RBP28.77■■■□□ 2.2
SPSB3-205ENST00000564070 ABCC8Q09428 1581 aa28.53■■■□□ 2.16
SPSB3-205ENST00000564070 TRIM41Q8WV44 630 aa28.52■■■□□ 2.16
SPSB3-205ENST00000564070 TOPBP1Q92547 1522 aa28.51■■■□□ 2.15
SPSB3-205ENST00000564070 DNMBPQ6XZF7 1577 aa28.5■■■□□ 2.15
SPSB3-205ENST00000564070 ZNF608Q9ULD9 1512 aaPredicted RBP28.43■■■□□ 2.14
SPSB3-205ENST00000564070 OSCARQ8IYS5 282 aa28.43■■■□□ 2.14
SPSB3-205ENST00000564070 IFT140Q96RY7 1462 aa28.37■■■□□ 2.13
SPSB3-205ENST00000564070 CUX1P39880 1505 aa28.27■■■□□ 2.12
SPSB3-205ENST00000564070 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
SPSB3-205ENST00000564070 TARBP1Q13395 1621 aaKnown RBP28.21■■■□□ 2.11
SPSB3-205ENST00000564070 EIF4G3O43432 1585 aaKnown RBP28.2■■■□□ 2.1
SPSB3-205ENST00000564070 AQRO60306 1485 aaKnown RBP eCLIP28.18■■■□□ 2.12e-8■■■■■ 44.6
SPSB3-205ENST00000564070 FGD5Q6ZNL6 1462 aa28.18■■■□□ 2.1
SPSB3-205ENST00000564070 SOGA1O94964 1423 aa28.13■■■□□ 2.09
SPSB3-205ENST00000564070 RAD54L2Q9Y4B4 1467 aa28.11■■■□□ 2.09
SPSB3-205ENST00000564070 WRNQ14191 1432 aaPredicted RBP eCLIP28.07■■■□□ 2.08
SPSB3-205ENST00000564070 RIMBP3CA6NJZ7 1639 aa28.07■■■□□ 2.08
SPSB3-205ENST00000564070 RIMBP3BA6NNM3 1639 aa28.07■■■□□ 2.08
SPSB3-205ENST00000564070 RIMBP3Q9UFD9 1639 aa28.07■■■□□ 2.08
SPSB3-205ENST00000564070 WDR97A6NE52 1622 aa28.04■■■□□ 2.08
SPSB3-205ENST00000564070 TOP2BQ02880 1626 aa28.03■■■□□ 2.08
SPSB3-205ENST00000564070 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
SPSB3-205ENST00000564070 TDRD9Q8NDG6 1382 aaKnown RBP28.02■■■□□ 2.08
SPSB3-205ENST00000564070 SYNJ1O43426 1573 aa28■■■□□ 2.07
SPSB3-205ENST00000564070 FBLN2P98095 1184 aa27.99■■■□□ 2.07
SPSB3-205ENST00000564070 CHD1O14646 1710 aa27.98■■■□□ 2.07
SPSB3-205ENST00000564070 ARHGEF11O15085 1522 aa27.97■■■□□ 2.07
SPSB3-205ENST00000564070 ABCA10Q8WWZ4 1543 aa27.92■■■□□ 2.06
SPSB3-205ENST00000564070 SNAPC4Q5SXM2 1469 aa27.85■■■□□ 2.05
SPSB3-205ENST00000564070 GRIN2BQ13224 1484 aa27.83■■■□□ 2.05
SPSB3-205ENST00000564070 ABCA5Q8WWZ7 1642 aa27.83■■■□□ 2.05
SPSB3-205ENST00000564070 CYB5RLQ6IPT4 315 aa27.83■■■□□ 2.05
SPSB3-205ENST00000564070 GAPVD1Q14C86 1478 aa27.82■■■□□ 2.04
SPSB3-205ENST00000564070 PBRM1Q86U86 1689 aa27.78■■■□□ 2.04
SPSB3-205ENST00000564070 MAGI1Q96QZ7 1491 aaPredicted RBP27.78■■■□□ 2.04
SPSB3-205ENST00000564070 CHMP7Q8WUX9 453 aaPredicted RBP27.74■■■□□ 2.03
SPSB3-205ENST00000564070 ARAP1Q96P48 1450 aa27.73■■■□□ 2.03
SPSB3-205ENST00000564070 SYNJ2O15056 1496 aa27.67■■■□□ 2.02
SPSB3-205ENST00000564070 CLASP1Q7Z460 1538 aa27.66■■■□□ 2.02
SPSB3-205ENST00000564070 ERICH3Q5RHP9 1530 aa27.6■■■□□ 2.01
SPSB3-205ENST00000564070 ADAMTS12P58397 1594 aa27.56■■■□□ 2
SPSB3-205ENST00000564070 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
SPSB3-205ENST00000564070 TRHP20396 242 aaPredicted RBP27.49■■□□□ 1.99
SPSB3-205ENST00000564070 KIF27Q86VH2 1401 aa27.49■■□□□ 1.99
SPSB3-205ENST00000564070 GRIN2AQ12879 1464 aa27.48■■□□□ 1.99
SPSB3-205ENST00000564070 NUP160Q12769 1436 aa27.36■■□□□ 1.97
SPSB3-205ENST00000564070 IGF1RP08069 1367 aa27.35■■□□□ 1.97
SPSB3-205ENST00000564070 CUL7Q14999 1698 aa27.35■■□□□ 1.97
SPSB3-205ENST00000564070 CEP170Q5SW79 1584 aa27.34■■□□□ 1.97
SPSB3-205ENST00000564070 ERCC6L2Q5T890 1561 aa27.33■■□□□ 1.97
SPSB3-205ENST00000564070 CARMIL1Q5VZK9 1371 aa27.2■■□□□ 1.94
SPSB3-205ENST00000564070 SHROOM2Q13796 1616 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms